Details from NCBI annotation

Gene Symbol Rtcb
Gene Name RNA 2',3'-cyclic phosphate and 5'-OH ligase
Entrez Gene ID 101717628

Database interlinks

Part of NW_004624750.1 (Scaffold)

For more information consult the page for NW_004624750.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RTCB ENSCPOG00000014461 (Guinea pig)

Gene Details

RNA 2',3'-cyclic phosphate and 5'-OH ligase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013027, Guinea pig)

Protein Percentage 99.21%
CDS Percentage 93.4%
Ka/Ks Ratio 0.01195 (Ka = 0.0036, Ks = 0.3044)

RTCB ENSG00000100220 (Human)

Gene Details

RNA 2',3'-cyclic phosphate and 5'-OH ligase

External Links

Gene Match (Ensembl Protein ID: ENSP00000216038, Human)

Protein Percentage 99.8%
CDS Percentage 89.83%
Ka/Ks Ratio 0.00173 (Ka = 0.0009, Ks = 0.5451)

D10Wsu52e ENSMUSG00000001783 (Mouse)

Gene Details

DNA segment, Chr 10, Wayne State University 52, expressed

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000001834, Mouse)

Protein Percentage 99.21%
CDS Percentage 88.38%
Ka/Ks Ratio 0.00527 (Ka = 0.0037, Ks = 0.6971)

Genome Location

Sequence Coding sequence

Length: 1518 bp    Location: 2045093..2062640   Strand: +
>XM_004844787.1
ATGAGCCGCAGTTACAACGATGAGCTGCAATTCCTGGAAAAGATCAACAAGAACTGCTGGAGGATCAAGAAGGCCTTCGTGCCTAATATGCAGGTTGAAGGGGTTTTCTATGTGAATGATGCTCTAGAAAAATTAATGTTTGAGGAATTAAGGAATGCCTGTCGAGGAGGTGGTGTTGGTGGCTTCCTGCCAGCCATGAAGCAGATTGGTAATGTGGCAGCCCTGCCTGGGATTGTTCATCGATCCATTGGGCTCCCTGATGTCCACTCAGGCTATGGGTTTGCCATTGGGAATATGGCAGCCTTTGATATGAATGACCCGGAAGCAGTGGTGTCCCCAGGTGGTGTCGGGTTTGACATCAACTGCGGTGTCCGCCTGCTGAGAACCAACTTGGATGAAAGTGATGTCCAACCCGTGAAGGAACAACTGGCCCAAGCGATGTTTGACCACATTCCTGTTGGCGTGGGGTCCAAAGGGGTCATTCCGATGAATGCCAAAGACCTGGAGGAGGCCTTGGAGATGGGTGTGGACTGGTCCCTGAGAGAAGGCTATGCCTGGGCCGAGGATAAGGAGCACTGTGAGGAGTACGGGAGGATGCTGCAGGCTGACCCCAACAAGGTCTCAGCGAGGGCCAAAAAGAGAGGCCTTCCTCAGTTGGGGACCCTGGGTGCAGGCAACCACTATGCAGAAATCCAGGTTGTGGACGAGATCTTCAATGAATATGCTGCAAAGAAAATGGGCATCGACCACAAGGGGCAGGTGTGCGTGATGATCCACAGCGGCAGCCGGGGCCTGGGCCACCAGGTCGCCACAGATGCCCTGGTGGCCATGGAAAAGGCCATGAAAAGAGACAAGATCATAGTCAATGACCGGCAGTTGGCTTGTGCTCGGATTGCCTCCCCAGAGGGCCAGGACTACCTAAAGGGAATGGCGGCTGCTGGCAACTACGCCTGGGTCAACCGCTCATCCATGACCTTCCTAACCCGCCAGGCTTTTGCCAAGGTCTTCAACACAACCCCAGACGACCTGGACCTGCATGTGATCTACGACGTTTCCCACAACATTGCCAAAGTGGAGCAGCACGTGGTGGACGGGAAGGAGCGGACACTGCTGGTGCATAGGAAGGGGTCCACTCGCGCTTTCCCTCCTCACCACCCACTCATCGCTGTGGACTACCAGCTCACTGGACAGCCGGTGCTCATTGGCGGCACCATGGGAACCTGCAGTTACGTTCTCACTGGCACTGAACAGGGGATGACGGAGACCTTTGGGACCACGTGTCACGGCGCGGGCCGTGCGTTGTCCCGAGCAAAATCTCGCCGTAATTTAGATTTCCAGGATGTCTTGGACAAATTGGCAGATATGGGAATTGCAATCCGGGTTGCCTCACCAAAACTAGTTATGGAAGAGGCTCCCGAGTCCTATAAGAATGTGACCGACGTGGTGAACACCTGCCATGATGCTGGAATCAGCAAGAAGGCCATTAAACTGAGGCCGATCGCCGTCATTAAAGGGTAG

Related Sequences

XP_004844844.1 Protein

Rtcb PREDICTED: tRNA-splicing ligase RtcB homolog [Heterocephalus glaber]

Length: 505 aa     
>XP_004844844.1
MSRSYNDELQFLEKINKNCWRIKKAFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVGGFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDINCGVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSLREGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQLGTLGAGNHYAEIQVVDEIFNEYAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIASPEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDLHVIYDVSHNIAKVEQHVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMTETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTDVVNTCHDAGISKKAIKLRPIAVIKG