Details from NCBI annotation

Gene Symbol Syn3
Gene Name synapsin III, transcript variant X2
Entrez Gene ID 101715067

Database interlinks

Part of NW_004624750.1 (Scaffold)

For more information consult the page for NW_004624750.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SYN3 ENSCPOG00000007306 (Guinea pig)

Gene Details

synapsin III

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006584, Guinea pig)

Protein Percentage 92.06%
CDS Percentage 91.36%
Ka/Ks Ratio 0.06744 (Ka = 0.0337, Ks = 0.4994)

SYN3 ENSG00000185666 (Human)

Gene Details

synapsin III

External Links

Gene Match (Ensembl Protein ID: ENSP00000351614, Human)

Protein Percentage 90.16%
CDS Percentage 86.64%
Ka/Ks Ratio 0.05773 (Ka = 0.0456, Ks = 0.7898)

Syn3 ENSMUSG00000059602 (Mouse)

Gene Details

synapsin III

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113720, Mouse)

Protein Percentage 89.79%
CDS Percentage 84.14%
Ka/Ks Ratio 0.05095 (Ka = 0.0512, Ks = 1.0047)

Syn3 ENSRNOG00000026866 (Rat)

Gene Details

synapsin III (Syn3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036740, Rat)

Protein Percentage 88.89%
CDS Percentage 84.26%
Ka/Ks Ratio 0.0639 (Ka = 0.0573, Ks = 0.8969)

Genome Location

Sequence Coding sequence

Length: 1740 bp    Location: 1667787..1976011   Strand: +
>XM_004844779.1
ATGAACTTCCTCCGGCGACGCCTCTCCGACAGCAGCTTTGTGGCCAACCTGCCCAATGGCTACATGCCAGACCTGCAGCGCCCTGACAGCTCCACCAGCTCCCCCGCATCCCCAGCCACCGAGAGGAGGCACCCACAGCCCCTGGCCGCCTCCTTCTCCTCACCTGGATCCAGCCTCTTCAGCTCCTTCCCTAGCTCCATGAGGCCATCCCCGCAGGCCCCCTCTGGGCCCACGGAGCCCCCAGTGCCCTCCACGCCCGTGGTCCAGAGGCCTCGGATCCTGTTGGTGATCGACGACGCGCACACAGACTGGGCGAAGTATTTCCACGGAAAGAAGGTGGACGGAGAGGTTGAGATCCGAGTGGAACAGGCTGAGTTCTCCGAGCTGAACCTGGCGGCCTGCGTCACCGGGGGCTGCATGGTGGATGTGCACGTGGTGAGAAACGGGACCAAGGTGGTGAGCAGGTCCTTCAAGCCGGACTTCCTCCTGGTCCGCCAGCATGCCTACAGCATGGCACTCGGAGAGGACTACCGGAGCCTGGTCATCGGCCTGCAGTACGGGGGTCTGCCTGCTGTCAACTCCCTCTACTCCGTCTACAACTTCTGCAGCAAGCCCTGGGTGTTCTCCCAGCTCATCAAGATCTTCCATACCCTGGGCCCCGAGAAGTTCCCGCTCGTGGAGCAGACATTCTTCCCCAACCACAAGCCAATGCTCACGGCCCCGCACTTCCCCGTGGTGGTCAAGCTGGGACACGCGCACGCTGGGATGGGAAAGATCAAAGTGGAGAACCAGCTTGACTACCAGGACATCACCAGCGTGGTGGCCATGGTCAAGACCTATGCCACCACCGAGGCCTTCATCGACTCCAAGTACGACATCCGCATCCAGAAGATCGGCTCCCACTACAAGGCGTACATGAGAACCTCCATCTCCGGGAACTGGAAGGCCAACACGGGCTCAGCCATGCTGGAGCAGGTGGCCATGACCGAGAGGTACCGGCTGTGGGTGGACAGCTGCTCCGAGATGTTTGGTGGCCTGGACATCTGTGCGGTGAAGGCCGTGCACAGCAAGGATGGCAGAGACTTCATCATCGAGGTCATGGACAGCTCAATGCCCCTGATCGGGGAGCACGTGGAGGACGACAGGCAGCTGATGGCCGACCTCGTGGTGTCCAAGATGAGCCAGCTCCTGGTGCCAGGGGCCACGGTGCCCTCGCCCCTGAGGCCCTGGGCTCCACAGACTAAGCCAGCAAAGTCTCCAGGCCAAGGCCAGCTGGTGCCTCAGCTGGGACAGCCCCAGACCCGCCCACCGCCGCAAGGGGGCCCTCGCCAGGCTCCGTCTCAGCCCCCCAGGCCTAGAAGCCCCTCCCAGCAGCGGCTCTCCCCACAAGGCCAGCAGCCCCTGAGCCCACAGCCGGGGTCCCCGCAGCCGCAGAGGTCCCCGGGCTCTCCACAGCTGGCCCGGGCTTCCGGGGGCTCCTCCCCAAGTCAGGCCTCCAAGGCGGGTACCACCCTCCCGTCCCAGCCCCGGCCACCTGCACAGGGCCGCAGTGCCTCCCAGCAGGGAGAGGAGCCCAAGAAGACAGCGCCGCCCCATCCCCACCTCAACAAATCCCAGTCCCTGACCAACAGCCTCAGCACGTCGGACGCCTCACAGCACGGGGCCCCGAGTGAGGACGAAGCCAAGGCCGAGACCATCCGCAGCCTGAGGAAGTCCTTCGCCAGCCTGTTCTCCGACTAG

Related Sequences

XP_004844836.1 Protein

Syn3 PREDICTED: synapsin-3 isoform X2 [Heterocephalus glaber]

Length: 579 aa      View alignments
>XP_004844836.1
MNFLRRRLSDSSFVANLPNGYMPDLQRPDSSTSSPASPATERRHPQPLAASFSSPGSSLFSSFPSSMRPSPQAPSGPTEPPVPSTPVVQRPRILLVIDDAHTDWAKYFHGKKVDGEVEIRVEQAEFSELNLAACVTGGCMVDVHVVRNGTKVVSRSFKPDFLLVRQHAYSMALGEDYRSLVIGLQYGGLPAVNSLYSVYNFCSKPWVFSQLIKIFHTLGPEKFPLVEQTFFPNHKPMLTAPHFPVVVKLGHAHAGMGKIKVENQLDYQDITSVVAMVKTYATTEAFIDSKYDIRIQKIGSHYKAYMRTSISGNWKANTGSAMLEQVAMTERYRLWVDSCSEMFGGLDICAVKAVHSKDGRDFIIEVMDSSMPLIGEHVEDDRQLMADLVVSKMSQLLVPGATVPSPLRPWAPQTKPAKSPGQGQLVPQLGQPQTRPPPQGGPRQAPSQPPRPRSPSQQRLSPQGQQPLSPQPGSPQPQRSPGSPQLARASGGSSPSQASKAGTTLPSQPRPPAQGRSASQQGEEPKKTAPPHPHLNKSQSLTNSLSTSDASQHGAPSEDEAKAETIRSLRKSFASLFSD