Details from NCBI annotation
| Gene Symbol |
Dctn1 |
|
Gene Name
|
dynactin 1, transcript variant X1 |
| Entrez Gene ID |
101703706
|
Database interlinks
Part of NW_004624749.1 (SequenceType object (1))
Potential Gene Matches
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
Gene Details
dynactin 1
External Links
Gene Match(Ensembl Protein ID:ENSCPOP00000011437, Guinea pig)
| Protein Percentage |
96.8% |
| CDS Percentage |
94.33% |
| Ka/Ks Ratio |
0.09313 (Ka = 0.0168, Ks = 0.1804) |
Gene Details
dynactin 1
External Links
Gene Match(Ensembl Protein ID:ENSP00000354791, Human)
| Protein Percentage |
97.03% |
| CDS Percentage |
92.75% |
| Ka/Ks Ratio |
0.05297 (Ka = 0.0149, Ks = 0.2819) |
Gene Details
dynactin 1
External Links
Gene Match(Ensembl Protein ID:ENSMUSP00000109552, Mouse)
| Protein Percentage |
96.33% |
| CDS Percentage |
89.83% |
| Ka/Ks Ratio |
0.03848 (Ka = 0.0184, Ks = 0.4774) |
Gene Details
dynactin 1 (Dctn1), mRNA
External Links
| Protein Percentage |
96.41% |
| CDS Percentage |
89.96% |
| Ka/Ks Ratio |
0.03921 (Ka = 0.0183, Ks = 0.4677) |
Sequence SequenceType object (2)
Length: 3846
bp
Location: 29115558..29135124
Strand: +
>XM_004844690.1
ATGGCCCAAAGCAAGAGGCACGTGTACAACCGGACACCTAGTAGCAGCAGGATGAGTGCGGAGGCAAGTGCCCGGCCTCTGCGTGTGGGCTCCCGTGTGGAGGTGATTGGAAAAGGCCACCGAGGCACTGTGGCCTATGTTGGAGCCACACTCTTTGCCACTGGCAAATGGGTAGGCGTTATCCTGGATGAAGCAAAGGGCAAGAATGATGGAGTTGTCCAAGGCAGAAAGTATTTCACTTGTGATGAAGGGCATGGCATCTTTGTGCGCCAATCCCAGATCCAGGTATTTGAAGATGGAGCAGATACTACTTCTCCAGAGACACCTGATTCATCTGCTTCAAAGGTCCTCAAAAGAGAGGGAGCTGATACAGCTGCAAAGACTAGCAAACTGCGGGGACTGAAGCCCAAGAAGGCACCGACAGCCCGAAAGACCACAACTCGGCGGCCCAAGCCCACTCGCCCAGCCAGTACTGGAGTGTCTGGGGCCAGTAGCTCCTTGGGCCCCTCTGGCTCAGCATCAGCAGGGGAGCTGAGCAGCAGTGAGCCCAGTACCCCAGCTCAGACTCCATTGGCAGCACCCATCATCCCCACGCCAGTCCTCACCTCTCCTGGAGCAGCACCCCCACTTCCTTCCCCTTCCAAGGAGGAGGAGGGACTGAGGGCTCAGGTTCGAGACCTGGAGGAGAAACTGGAGACCCTTCGGCTAAAACGGGCAGAAGACAAGGCAAAGCTGAAAGAGCTGGAGAAACACAAGATCCAGCTGGAGCAGGTGCAGGAATGGAAGAGCAAAATGCAGGAGCAGCAGGCAGACCTGCAGCGGCGCCTCAAGGAGGCACGGAAGGAAGCCAAGGAGGCAATGGAGGCCAAGGAGCGCTACATGGAGGAGATGGCAGATACTGCTGATGCCATCGAGATGGCCACTTTGGACAAGGAGATGGCTGAAGAGCGGGCTGAGTCTCTGCAGCAGGAGGTGGAGGCCCTGAAGGAGCGCGTGGATGAGCTTACCACAGACTTGGAGATCCTCAAGGCTGAGATCGAAGAGAAGGGCTCAGATGGGGCTGCATCCAGTTACCAGCTCAAGCAGCTTGAGGAACAGAACGCTCGCCTCAAGGATGCCCTGGTGAGGATGCGGGATCTTTCTTCCTCAGAGAAGCAGGAACATGTGAAGCTCCAGAAACTTATGGAAAAGAAGAACCAAGAGCTGGAAGTTGTGAGGCAACAGCGAGAGCGCCTTCAGGAAGAGTTAACCCAGGCAGAGAGCACCATTGATGAGCTCAAGGAGCAGGTGGATGCTGCTCTGGGTGCTGAGGAGATGGTGGAGATGCTGACTGACCGGAATCTGAATCTGGAAGAGAAAGTGCGGGAGTTGAGGGAGACTGTAGGGGACTTGGAAGCAATGAATGAGATGAATGATGAGCTGCAGGAGAATGCACGTGAGACAGAACTGGAGCTGCGGGAGCAGCTGGACATGGCAGGTGCCCGAGTGCGTGAGGCCCAGAAACGTGTGGAGGCAGCCCAAGAGACAGTTGCAGACTACCAGCAAACCATCAAGAAGTACCGCCAGCTGACTGCCCACCTGCAGGATGTGAATCGGGAATTGACAAACCAGCAGGAAGCATCTGTGGAGAGACAGCAGCAGCCACCTCTAGAGACTTTTGACTTCAAAATCAAGTTTGCTGAGACTAAGGCACATGCTAAGGCAATCGAGATGGAGTTGAGACAGATGGAGGTGGCCCAGGCCAACCGGCACATGTCCCTCCTGACAGCCTTCATGCCTGACAGCTTCCTTCGGCCAGGTGGAGACCATGACTGTGTCCTGGTGTTGCTGCTTATGCCTCGTCTCATTTGCAAGGCAGAGCTGATCCGGAAGCAGGCCCAAGAGAAATTTGAACTAAGTGAGAACTCTTTGGAGCGGCCTGGACTTCGAGGAGCTGCAGGGGAGCAGCTCAGCTTTGCTGCTGGACTGGTATACTCACTGAGCCTGTTGCAGGCCACACTGCACCGCTATGAGCATGCCCTTTCTCAGTGCAATGTGGATGTGTATAAGAAGGTGGGCAGCCTCTACCCTGAGATGAGTGCCCACGAGCGCTCCTTAGATTTCCTCATTGAGCTGCTGCACAAGGATCAGCTGGATGAGACTGTCAATGTGGAGCCTCTCACCAAGGCCATCAAATACTACCAGCATCTGTATAGCATCCACCTTGCTGAACAGCCTGAGGACTGTACCATGCAGCTGGCTGACCACATTAAGTTCACCCAGAGTGCCCTGGACTGCATGAGCGTGGAGGTGGGGCGGCTGCGTGCCTTCTTGCAGAGTGGGCAGGAGGCTACAGATCTTGCCCTTCTGCTTCGGGACCTAGAAACATCATGCAGTGACATCCGCCAGTTCTGCAAGAAGATCCGAAGGCGAATGCCAGGGACAGATGCTCCTGGAATCCCAGCTGCACTGGCCTTTGGATCCCAGGTATCGGACACACTCCTAGACTGCAGGAAACACTTGACATGGGTGGTGGCTGTGCTGCAAGAAGTGGCAGCTGCTGCTGCTCAGCTCATTGCCCCCCTGGCAGAGAATGAGGGGCTACCTGTGGCTGCACTGGAGGAGCTGGCTTTCAAAGCAAATGAACAGATTTATGGGAGCCCTTCCAGTAGCCCCTATGAGTGTCTGCGTCAGTCATGCACCATCCTCATCAGCACCATGAACAAGCTGGCCACAGCTATGCAGGAAGGGGAGTATGATGCTGAGCGGCCCCCCAGCAAGCCTCCTCCAGTTGAGCTTCGGGCTGCAGCCCTTCGTGCGGAGATCACAGATGCTGAAGGCCTAGGTTTGAAGCTTGAAGATCGAGAGACAGTTATCAAGGAGTTGAAGAAGTCACTCAAGATTAAGGGAGAGGAGCTGAGTGAGGCAAACGTGCGGCTCAGCCTCCTGGAGAAGAAGCTGGACAGCGCCGCCAAAGATGCAGATGAGCGTATTGACAAAGTCCAGACTCGGCTGGAGGAGACCCAGACACTGCTGCGGAAGAAGGAGAAAGAGTTTGAGGAGACAATGGATGCGCTCCAGGCTGACATTGACCAGCTGGAGGCAGAGAAGGCAGAGCTAAAACAGCGACTGAACAACCAGTCGAAGCGCACAATTGAGGGGCTCCGGGGGCCCCCTCCCTCAGGCATTGCTACACTGGTCTCTGGCATTGCTGGCGAAGAGCAGCAGCGAGGAAGCACTCCTGGGCAGGCTCCAGGGTCCTTGCCAGGCCCAGGGCTGGTGAAGGACTCACCCCTGCTGCTTCAGCAGATCTCTGCCATGAGGCTGCACATCTCTCAGCTCCAGCATGAGAACAGCATTCTGAAGGGAGCCCAGATGAAGGCATCCTTGGCAGCCCTGCCCCCTCTGCATGTTGCAAAGCTTTCCCTCCCACCCCATGAGGGCCCTGCTAGTGAGCTAGCCGCTGGAGTGCTATATCGTAAGACCAGTCAGCTGCTGGAGACATTAAATCAGCTGAGCACTCACACTCATGTAGTAGATATCACTCGTGCCAGCCCTGCTTCCAAGAGCCCATCGGCCCAGCTTATGGAGCAAGTGGCTCAGCTCAAGTCCCTGAGCGACACCATTGAGAAGCTCAAGGATGAGGTCCTCAGGGAGACAGTATCTCAACGCCCTGGAGCCACAGTCCCCACTGACTTTGCCACTTTCCCTTCATCAGTCTTCCTCAGGGCCAAGGAAGAGCAGCAAGATGACACAGTCTACATGGGCAAAGTGACCTTCTCATGTGCGGCTGGCCTCGGACAGCGACACCGGCTGGTGCTGACCCAGGAGCAGCTGTACCAGCTTCATAGTCACCTCATCTCCTAA
Related Sequences
Dctn1 PREDICTED: dynactin subunit 1 isoform X1 [Heterocephalus glaber]
Length: 1281
aa
View alignments>XP_004844747.1
MAQSKRHVYNRTPSSSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEAKGKNDGVVQGRKYFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKVLKREGADTAAKTSKLRGLKPKKAPTARKTTTRRPKPTRPASTGVSGASSSLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPVLTSPGAAPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEAMEAKERYMEEMADTADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELTQAESTIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEASVERQQQPPLETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPGGDHDCVLVLLLMPRLICKAELIRKQAQEKFELSENSLERPGLRGAAGEQLSFAAGLVYSLSLLQATLHRYEHALSQCNVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLAEQPEDCTMQLADHIKFTQSALDCMSVEVGRLRAFLQSGQEATDLALLLRDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALAFGSQVSDTLLDCRKHLTWVVAVLQEVAAAAAQLIAPLAENEGLPVAALEELAFKANEQIYGSPSSSPYECLRQSCTILISTMNKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKLDSAAKDADERIDKVQTRLEETQTLLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNNQSKRTIEGLRGPPPSGIATLVSGIAGEEQQRGSTPGQAPGSLPGPGLVKDSPLLLQQISAMRLHISQLQHENSILKGAQMKASLAALPPLHVAKLSLPPHEGPASELAAGVLYRKTSQLLETLNQLSTHTHVVDITRASPASKSPSAQLMEQVAQLKSLSDTIEKLKDEVLRETVSQRPGATVPTDFATFPSSVFLRAKEEQQDDTVYMGKVTFSCAAGLGQRHRLVLTQEQLYQLHSHLIS