Details from NCBI annotation

Gene Symbol Rtkn
Gene Name rhotekin, transcript variant X1
Entrez Gene ID 101701939

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RTKN ENSCPOG00000012724 (Guinea pig)

Gene Details

rhotekin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011448, Guinea pig)

Protein Percentage 94.86%
CDS Percentage 94.39%
Ka/Ks Ratio 0.15445 (Ka = 0.0246, Ks = 0.1592)

RTKN ENSG00000114993 (Human)

Gene Details

rhotekin

External Links

Gene Match (Ensembl Protein ID: ENSP00000272430, Human)

Protein Percentage 90.76%
CDS Percentage 91.18%
Ka/Ks Ratio 0.18594 (Ka = 0.0462, Ks = 0.2483)

Rtkn ENSMUSG00000034930 (Mouse)

Gene Details

rhotekin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000065571, Mouse)

Protein Percentage 87.06%
CDS Percentage 86.7%
Ka/Ks Ratio 0.15175 (Ka = 0.0668, Ks = 0.4404)

Rtkn ENSRNOG00000009022 (Rat)

Gene Details

rhotekin (Rtkn), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000032233, Rat)

Protein Percentage 85.58%
CDS Percentage 84.98%
Ka/Ks Ratio 0.181 (Ka = 0.0864, Ks = 0.4771)

Genome Location

Sequence Coding sequence

Length: 1695 bp    Location: 29061208..29076325   Strand: +
>XM_004844683.1
ATGTTCTCCCGAAACCACCGGAGCCGGGTTACCGTGGCCAGGGGCTCAGCCCTGGAGATGGAGTTCAAGCGCGGCCGCTTCCGACTTAGCCTCTTCAGCGACCCGCCCGAGGACACGGAGTTGCAGAGGAAACTAGACCATGAGATCCGGATGAGGGAAGGGGCCTGCAAACTGCTGGCAGCCTGCTCTCAACGAGAACAGGCTCTGGAGGTCACCAAGAGCCTGCTGGTATGCAACAGCCGAATCCTCAGCTACATGGGCGAGCTACAGCGGCGCAAGGAGGCCCAGGTGGTGGAGAAGACAGGACGGCGGCCTTCTGACAGCGGGCCGCCCCCTGAGCGCTCCCCATGCCGCGGCCGGGTCTGCATCTCCGACCTCCGGATCCCACTCATGTGGAAAGACACAGAATATTTCAAGAACAAAGGTGACCTGCACCGCTGGGCTGTATTTCTACTGCTACAGCTAGGGGAACAGATTGAGGACACAGAGATGATTCTGGTGGACAGGACCCTCACAGACATCTCCTTTCAGAACAGTGTGCTCTTCACTGAGGCGGGGCCAGACTTTGAACTGCGGCTGGAGCTGTATGGGGCCTGTGTAGAAGAAGAGGGGGCCCTAGCTGGCGCCCCCAAGAGGCTTGCCACCAAACTCAGCAGCTCCCTAGGCCGCTCCTCAGGGAAGCGTGTCCGTGCATCGATGGACAGTGCTGGGGGCTCAGGGAGCAGTCCCATCCTGCTCCCCACTCCTGCTGTGGGGGGTCCTCGTTACCACCTCTTGGCTCAAACCACACTTACCCTGGCAGCAGTGCAAGATGGGTTCCGCACACATGACCTCACCCTCACCAGCCATGAGGAGAACCCTGCCTGGCTGCCACTTTACGGTAGTGTGTGTTGCCGCCTGGCAGCTCAGCCTCTTTGTATGACTCAGCCCACTGCAAGTGGTACCCTCAGGGTGCAGCAAGCTGGGCAGCTACAAAATGGGGCACGAGTGCATGGAGTCCTGAAAGGCACAAACCTCTTCTGTTACCGGCGACGAGAGGACACAGACACTGGGGAAGAGCCGCTGTTAACTATTGCCATCAACAAGGCAACTCGAGTCCGGGCAGGAGAGCTGGACCAGGCCCCAGGGCGGCCCTTCACCCTCAGCATCAGTAACCAGTATGGGGATGACGAGGTGATGCACACCCTTCAGACAGACAGCCAGGAAGCCCTGCAGAGCTGGAGGGAGGCTCTGTGGCAGCTCTTCTTTGACATGAGCCAGTGGAAGCAGTGCTGTGATGAAATCATGAAAATTGAAACTCCTGCTCCCCGGAAACCGCCCCAAGCCATGGCCAAACAGGGCTCCTTGTACCATGAGATGGCTATTGAGCCACTAGATGACATCGCAGCGGTGACAGACATCCTGGCTCAGCGAGAGGGCACAAGGCTGGAGACATCCCCACCCTGGCTAGCAATGTTTACAGATCAGCCTGCCCTGCCTAGCTCCTGCTTGCCTGCCTCAGTGGCCCCAGCCCCTGCCTGGACCCCCCCTCTGCCCTGGGGGCGACCCCGAACCTTTTCCCTGGATGCTGTCCCCCCAGACCACTCCCCTGGGGCTTCTTGCTCGGTTGCCCCCCTCCCCCCACATCAATCCTCAAGTTCTAGAGGCCTCTGCAGCAAAAGTCCTCTCCGTACTTGGCTCCAGTCACCAGTGTGA

Related Sequences

XP_004844740.1 Protein

Rtkn PREDICTED: rhotekin isoform X1 [Heterocephalus glaber]

Length: 564 aa      View alignments
>XP_004844740.1
MFSRNHRSRVTVARGSALEMEFKRGRFRLSLFSDPPEDTELQRKLDHEIRMREGACKLLAACSQREQALEVTKSLLVCNSRILSYMGELQRRKEAQVVEKTGRRPSDSGPPPERSPCRGRVCISDLRIPLMWKDTEYFKNKGDLHRWAVFLLLQLGEQIEDTEMILVDRTLTDISFQNSVLFTEAGPDFELRLELYGACVEEEGALAGAPKRLATKLSSSLGRSSGKRVRASMDSAGGSGSSPILLPTPAVGGPRYHLLAQTTLTLAAVQDGFRTHDLTLTSHEENPAWLPLYGSVCCRLAAQPLCMTQPTASGTLRVQQAGQLQNGARVHGVLKGTNLFCYRRREDTDTGEEPLLTIAINKATRVRAGELDQAPGRPFTLSISNQYGDDEVMHTLQTDSQEALQSWREALWQLFFDMSQWKQCCDEIMKIETPAPRKPPQAMAKQGSLYHEMAIEPLDDIAAVTDILAQREGTRLETSPPWLAMFTDQPALPSSCLPASVAPAPAWTPPLPWGRPRTFSLDAVPPDHSPGASCSVAPLPPHQSSSSRGLCSKSPLRTWLQSPV