Details from NCBI annotation

Gene Symbol Wdr54
Gene Name WD repeat domain 54, transcript variant X2
Entrez Gene ID 101701340

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

WDR54 ENSCPOG00000012721 (Guinea pig)

Gene Details

WD repeat domain 54

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011445, Guinea pig)

Protein Percentage 92.81%
CDS Percentage 92.32%
Ka/Ks Ratio 0.2328 (Ka = 0.0422, Ks = 0.1813)

WDR54 ENSG00000005448 (Human)

Gene Details

WD repeat domain 54

External Links

Gene Match (Ensembl Protein ID: ENSP00000006526, Human)

Protein Percentage 88.92%
CDS Percentage 88.52%
Ka/Ks Ratio 0.18646 (Ka = 0.0598, Ks = 0.3206)

Wdr54 ENSMUSG00000030032 (Mouse)

Gene Details

WD repeat domain 54

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000116608, Mouse)

Protein Percentage 88.62%
CDS Percentage 86.63%
Ka/Ks Ratio 0.13422 (Ka = 0.0594, Ks = 0.4429)

Wdr54 ENSRNOG00000009324 (Rat)

Gene Details

WD repeat domain 54 (Wdr54), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013128, Rat)

Protein Percentage 88.92%
CDS Percentage 86.13%
Ka/Ks Ratio 0.13417 (Ka = 0.0619, Ks = 0.4611)

Genome Location

Sequence Coding sequence

Length: 1050 bp    Location: 29080128..29076669   Strand: -
>XM_004844682.1
ATGGTGGCGGCGGATTCGGAGGGGCCGAAGGATCCTGGAATCAGGATGTTCCGCCGGGAGCGTTCCATCCCCCTTCAAGGCTCTGCCGCCGCTCTGTGCAACAATCTCAGTGTGCTACAGCTGCCTGCCCGCAACCTCACCCTTTTTGGGGTAGTTCATGGACCAAGCGCCCAGGTTCTCAGTGCTGCCCCTGACGGTGTGCCCTTAGCCCAGCGCCAACTCCACGTTAAAGAGGGAGCTGGAGTGAGCGCCCCACATATCACTCAGGTCCACTGGTGCGTCCTCCCCTTCCGAGTACTGCTGGTACTCACTTCGCATCGAGGGATACAGATGTATGAGTCTGATGGCTCCATCATGGTCTATTGGCATGCACTAGACTCTGGAGATGCCCCTTCAGTACAGGCTGTGTTTGCCCGAGGAATTGCTGCCAGTGGCCACTTCATCTGTGTGGGAACGTGGTCAGGCCGAGTGCTGGTGTTTGACATCCCAGCCAAGGGTCCCAACATTGTGCTGAGTGAGGAGCTGGCAGGACACCAGACACCAATCACAGATATTGCCACTGAGCCTGCCCAAGGACAGGATGGTGTGGCTGACATGGTGACAGCAGATGACTCTGGCTCACTGTGTGTCTGGAGGTCAGGACCGGAATTCACATTACTGACCCGTATTCCAGGATTTGGGGTCCCATGCTCCTCTGTGCAGCTGTGGCAGGGGATTGTAGCAGCAGGCTATGGGAATGGACAGGTGCATCTATATGAGGCCACTACAGGAACTTTGAACATCCAGATCAATGCCCATGCCAGGGCCATCTGTGCATTGAACCTAGCTCCTGAGGTGGGCAAGCTCCTCTCTGCAGCTGAAGACACTTTTGTACACATCTGGAAGCTGAGCAGAAGCCCACAGAATGGCTGCATTGAGGTGGAACATTGTCATAGTGAGTGTGTATCTGACACCCAGGTGTGTGGTGCTCAGTTCTGTGATCCCTCAGGCAGCTCCTTTGCTGTGACAGGGTATGACCTCACTGAGATCCTGAGATTTGGCAGTGTGTGA

Related Sequences

XP_004844739.1 Protein

Wdr54 PREDICTED: WD repeat-containing protein 54 isoform X2 [Heterocephalus glaber]

Length: 349 aa      View alignments
>XP_004844739.1
MVAADSEGPKDPGIRMFRRERSIPLQGSAAALCNNLSVLQLPARNLTLFGVVHGPSAQVLSAAPDGVPLAQRQLHVKEGAGVSAPHITQVHWCVLPFRVLLVLTSHRGIQMYESDGSIMVYWHALDSGDAPSVQAVFARGIAASGHFICVGTWSGRVLVFDIPAKGPNIVLSEELAGHQTPITDIATEPAQGQDGVADMVTADDSGSLCVWRSGPEFTLLTRIPGFGVPCSSVQLWQGIVAAGYGNGQVHLYEATTGTLNIQINAHARAICALNLAPEVGKLLSAAEDTFVHIWKLSRSPQNGCIEVEHCHSECVSDTQVCGAQFCDPSGSSFAVTGYDLTEILRFGSV