Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101724866

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AUP1 ENSCPOG00000025054 (Guinea pig)

Gene Details

ancient ubiquitous protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018394, Guinea pig)

Protein Percentage 96.1%
CDS Percentage 94.72%
Ka/Ks Ratio 0.15511 (Ka = 0.0219, Ks = 0.1411)

AUP1 ENSG00000115307 (Human)

Gene Details

ancient ubiquitous protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000366748, Human)

Protein Percentage 92.68%
CDS Percentage 91.22%
Ka/Ks Ratio 0.16074 (Ka = 0.0392, Ks = 0.2436)

Aup1 ENSMUSG00000068328 (Mouse)

Gene Details

ancient ubiquitous protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000090281, Mouse)

Protein Percentage 90.89%
CDS Percentage 89.9%
Ka/Ks Ratio 0.16113 (Ka = 0.0473, Ks = 0.2937)

Aup1 ENSRNOG00000007842 (Rat)

Gene Details

ancient ubiquitous protein 1 (Aup1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000010602, Rat)

Protein Percentage 93.41%
CDS Percentage 91.06%
Ka/Ks Ratio 0.12407 (Ka = 0.0338, Ks = 0.2722)

Genome Location

Sequence Coding sequence

Length: 1446 bp    Location: 28983676..28986785   Strand: +
>XM_004844661.1
ATGAACGCTGGGAATTGTGGTCCCCACCGGACGCGAGTTCTCAGGCGGCCCCGGGGGCCGCAGGGCATGCTGGGTCTGCTAGCCCTTCCGGGGCGCCTCCGGACTTCGGGTCGAGCACCTTGGCGGATGCCCAAAGACTCCGCCTTCCCAAGATCCCCTGCGGCCCGGCGCAGATGGCGGCAGCGGCGGCCGGGCTACCTTAAAACAGCTGCGATGGAGCCTCTCCCGGCACCCGGGCCGGAGCGGCTCTTTGACTCGCACAGGCTTCCGGGTGACGGCTTCCTGCTCCTCGCGCTGCTGCTCTACGCGCCCGTCGGCTTCTGCCTCCTAGTCCTGCGCCTCTTTCTTGGGATCCACGTCTTCTTGGTCAGCTGCGCGCTGCCAGACAGTGTCTTCCGCAGGTTCGTGGTACGGACCATGTGTGCGGTGCTGGGGCTCGTGGCCCGCCAGGAAGGCTCTGGACTCCGGGATCCCCGCGTCAGGGTTCTCATTTCCAACCACGTGACACCTTTTGACCACAACATAGTCAACCTACTCACCACCTGTAGCACCCCTCTCCTCAATAGTCCTCCCAGCTTTGTGTGTTGGTCTCGGGGCTTCATGGAGATGGATAGGCGGGTGGAGTTGGTGGAGTCACTTAAGAGATTCTGTGCCTCCACAAGGCTTCCTCCCACCCCACTGCTGCTGTTCCCCGAGGAAGAGGCCACCAATGGCCGGGAGGGGCTCCTGCGCTTCAGTTCCTGGCCATTTTCTATCCAGGATGTAGTACAACCTCTTACCCTGCAAGTTCAGAGACCCCTAGTCTCTGTGACGGTGTCAGATGCTTCCTGGGTCTCAGAACTGCTGTGGTCACTTTTCGTCCCTTTCACGGTGTATCAAGTAAGGTGGCTTCATCCTGTTCGTCGCCAGCTGGGAGAGGGAAATGAGGAATTTGCACTCCGTGTACAACAGCTGGTGGCCAAGGAATTGGGCCAGACAGGAACACGGCTTACTCCAGCAGACAAAGCAGAACACATGAAGCGACAAAGACACCCCAGATTGCACCCCCAGTTAGCCCAGTCTTCTTTCCCTCCCTCTCCTGGCCCTTCTCCTGATGTACAGCTGACAACGCTGGCTCAGAGAGTCAAGGAGGTTTTGCCCCATGTGCCATTGCACGTCATCCAGAGAGACCTTGCGAGGACTGGCTGTGTAGACTTGACCATTACTAATCTGCTTGAGGGGGCTGTAGCTTTCGTGCCTGAAGACATCACTGAGGAAACCCAGTCCCGGCCTACAGTCTCTGCCCCAAAGTTCCCCAGCTCTGGCCTGGTGACCCCTCAGCCCACAGCCCTAACATTTGCCAAGTCTTCCTGGGCCCGCCAGGAGAGCCTGCAGGAGCGCAAGCAGGCACTGTATGAATATGCAAGAAGGAGATTCAGAGAGAGACAGGCCCAGGAGGCTGACTGA

Related Sequences

XP_004844718.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: ancient ubiquitous protein 1 [Heterocephalus glaber]

Length: 481 aa      View alignments
>XP_004844718.1
MNAGNCGPHRTRVLRRPRGPQGMLGLLALPGRLRTSGRAPWRMPKDSAFPRSPAARRRWRQRRPGYLKTAAMEPLPAPGPERLFDSHRLPGDGFLLLALLLYAPVGFCLLVLRLFLGIHVFLVSCALPDSVFRRFVVRTMCAVLGLVARQEGSGLRDPRVRVLISNHVTPFDHNIVNLLTTCSTPLLNSPPSFVCWSRGFMEMDRRVELVESLKRFCASTRLPPTPLLLFPEEEATNGREGLLRFSSWPFSIQDVVQPLTLQVQRPLVSVTVSDASWVSELLWSLFVPFTVYQVRWLHPVRRQLGEGNEEFALRVQQLVAKELGQTGTRLTPADKAEHMKRQRHPRLHPQLAQSSFPPSPGPSPDVQLTTLAQRVKEVLPHVPLHVIQRDLARTGCVDLTITNLLEGAVAFVPEDITEETQSRPTVSAPKFPSSGLVTPQPTALTFAKSSWARQESLQERKQALYEYARRRFRERQAQEAD