Details from NCBI annotation
| Gene Symbol |
unclassified transcription discrepancy |
|
Gene Name
|
mRNA |
| Entrez Gene ID |
101724866
|
Database interlinks
Part of NW_004624749.1 (SequenceType object (1))
Potential Gene Matches
The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.
Gene Details
ancient ubiquitous protein 1
External Links
Gene Match(Ensembl Protein ID:ENSCPOP00000018394, Guinea pig)
| Protein Percentage |
96.1% |
| CDS Percentage |
94.72% |
| Ka/Ks Ratio |
0.15511 (Ka = 0.0219, Ks = 0.1411) |
Gene Details
ancient ubiquitous protein 1
External Links
Gene Match(Ensembl Protein ID:ENSP00000366748, Human)
| Protein Percentage |
92.68% |
| CDS Percentage |
91.22% |
| Ka/Ks Ratio |
0.16074 (Ka = 0.0392, Ks = 0.2436) |
Gene Details
ancient ubiquitous protein 1
External Links
Gene Match(Ensembl Protein ID:ENSMUSP00000090281, Mouse)
| Protein Percentage |
90.89% |
| CDS Percentage |
89.9% |
| Ka/Ks Ratio |
0.16113 (Ka = 0.0473, Ks = 0.2937) |
Gene Details
ancient ubiquitous protein 1 (Aup1), mRNA
External Links
| Protein Percentage |
93.41% |
| CDS Percentage |
91.06% |
| Ka/Ks Ratio |
0.12407 (Ka = 0.0338, Ks = 0.2722) |
Sequence SequenceType object (2)
Length: 1446
bp
Location: 28983676..28986785
Strand: +
>XM_004844661.1
ATGAACGCTGGGAATTGTGGTCCCCACCGGACGCGAGTTCTCAGGCGGCCCCGGGGGCCGCAGGGCATGCTGGGTCTGCTAGCCCTTCCGGGGCGCCTCCGGACTTCGGGTCGAGCACCTTGGCGGATGCCCAAAGACTCCGCCTTCCCAAGATCCCCTGCGGCCCGGCGCAGATGGCGGCAGCGGCGGCCGGGCTACCTTAAAACAGCTGCGATGGAGCCTCTCCCGGCACCCGGGCCGGAGCGGCTCTTTGACTCGCACAGGCTTCCGGGTGACGGCTTCCTGCTCCTCGCGCTGCTGCTCTACGCGCCCGTCGGCTTCTGCCTCCTAGTCCTGCGCCTCTTTCTTGGGATCCACGTCTTCTTGGTCAGCTGCGCGCTGCCAGACAGTGTCTTCCGCAGGTTCGTGGTACGGACCATGTGTGCGGTGCTGGGGCTCGTGGCCCGCCAGGAAGGCTCTGGACTCCGGGATCCCCGCGTCAGGGTTCTCATTTCCAACCACGTGACACCTTTTGACCACAACATAGTCAACCTACTCACCACCTGTAGCACCCCTCTCCTCAATAGTCCTCCCAGCTTTGTGTGTTGGTCTCGGGGCTTCATGGAGATGGATAGGCGGGTGGAGTTGGTGGAGTCACTTAAGAGATTCTGTGCCTCCACAAGGCTTCCTCCCACCCCACTGCTGCTGTTCCCCGAGGAAGAGGCCACCAATGGCCGGGAGGGGCTCCTGCGCTTCAGTTCCTGGCCATTTTCTATCCAGGATGTAGTACAACCTCTTACCCTGCAAGTTCAGAGACCCCTAGTCTCTGTGACGGTGTCAGATGCTTCCTGGGTCTCAGAACTGCTGTGGTCACTTTTCGTCCCTTTCACGGTGTATCAAGTAAGGTGGCTTCATCCTGTTCGTCGCCAGCTGGGAGAGGGAAATGAGGAATTTGCACTCCGTGTACAACAGCTGGTGGCCAAGGAATTGGGCCAGACAGGAACACGGCTTACTCCAGCAGACAAAGCAGAACACATGAAGCGACAAAGACACCCCAGATTGCACCCCCAGTTAGCCCAGTCTTCTTTCCCTCCCTCTCCTGGCCCTTCTCCTGATGTACAGCTGACAACGCTGGCTCAGAGAGTCAAGGAGGTTTTGCCCCATGTGCCATTGCACGTCATCCAGAGAGACCTTGCGAGGACTGGCTGTGTAGACTTGACCATTACTAATCTGCTTGAGGGGGCTGTAGCTTTCGTGCCTGAAGACATCACTGAGGAAACCCAGTCCCGGCCTACAGTCTCTGCCCCAAAGTTCCCCAGCTCTGGCCTGGTGACCCCTCAGCCCACAGCCCTAACATTTGCCAAGTCTTCCTGGGCCCGCCAGGAGAGCCTGCAGGAGCGCAAGCAGGCACTGTATGAATATGCAAGAAGGAGATTCAGAGAGAGACAGGCCCAGGAGGCTGACTGA
Related Sequences
unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: ancient ubiquitous protein 1 [Heterocephalus glaber]
Length: 481
aa
View alignments>XP_004844718.1
MNAGNCGPHRTRVLRRPRGPQGMLGLLALPGRLRTSGRAPWRMPKDSAFPRSPAARRRWRQRRPGYLKTAAMEPLPAPGPERLFDSHRLPGDGFLLLALLLYAPVGFCLLVLRLFLGIHVFLVSCALPDSVFRRFVVRTMCAVLGLVARQEGSGLRDPRVRVLISNHVTPFDHNIVNLLTTCSTPLLNSPPSFVCWSRGFMEMDRRVELVESLKRFCASTRLPPTPLLLFPEEEATNGREGLLRFSSWPFSIQDVVQPLTLQVQRPLVSVTVSDASWVSELLWSLFVPFTVYQVRWLHPVRRQLGEGNEEFALRVQQLVAKELGQTGTRLTPADKAEHMKRQRHPRLHPQLAQSSFPPSPGPSPDVQLTTLAQRVKEVLPHVPLHVIQRDLARTGCVDLTITNLLEGAVAFVPEDITEETQSRPTVSAPKFPSSGLVTPQPTALTFAKSSWARQESLQERKQALYEYARRRFRERQAQEAD