Details from NCBI annotation

Gene Symbol Lrrtm4
Gene Name leucine rich repeat transmembrane neuronal 4, transcript variant X3
Entrez Gene ID 101717510

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRTM4 ENSCPOG00000012033 (Guinea pig)

Gene Details

leucine rich repeat transmembrane neuronal 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010825, Guinea pig)

Protein Percentage 98.26%
CDS Percentage 95.75%
Ka/Ks Ratio 0.0572 (Ka = 0.0083, Ks = 0.1454)

LRRTM4 ENSG00000176204 (Human)

Gene Details

leucine rich repeat transmembrane neuronal 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000386357, Human)

Protein Percentage 98.26%
CDS Percentage 94.53%
Ka/Ks Ratio 0.04674 (Ka = 0.0092, Ks = 0.1979)

Lrrtm4 ENSMUSG00000052581 (Mouse)

Gene Details

leucine rich repeat transmembrane neuronal 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000117445, Mouse)

Protein Percentage 96.33%
CDS Percentage 87.97%
Ka/Ks Ratio 0.03459 (Ka = 0.0199, Ks = 0.5741)

Lrrtm4 ENSRNOG00000021938 (Rat)

Gene Details

leucine rich repeat transmembrane neuronal 4 (Lrrtm4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034217, Rat)

Protein Percentage 95.75%
CDS Percentage 87.52%
Ka/Ks Ratio 0.03805 (Ka = 0.0227, Ks = 0.5961)

Genome Location

Sequence Coding sequence

Length: 1557 bp    Location: 25669348..26444238   Strand: +
>XM_004844643.1
ATGGGTTTCCATTTAATTACGCAGCTGAAAGGCATGAGTGTGGTTCTGGTGCTACTTCCTACACTGCTGCTTGTTATGCTCACGGGGGCTCAGAGAGCTTGCCCGAAGAACTGCAGATGTGATGGCAAAATTGTGTACTGTGAGTCTCATGCCTTTGCAGATATTCCTGAGAACATTTCTGGTGGGTCACAAGGCTTATCATTAAGGTTCAACAGCATTCAGAAGCTCAAATCCAATCAGTTTGCCGGCCTTAACCAGCTTATATGGCTTTATCTTGACCATAATTACATTAGCTCAGTGGATGAAGATGCATTTCAAGGGATCCGTCGACTGAAAGAATTAATTCTAAGCTCCAACAAAATTACCTATCTGCACAATAAAACATTTCACCCAGTTCCCAATCTCCGCAATCTGGACCTGTCCTACAATAAACTTCAGACATTGCAATCTGAACAATTTAAAGGACTTCGGAAACTCATAATTTTGCACTTGAGGTCTAACTCACTAAAGACTGTTCCCATAAGAGTTTTTCAAGACTGTAGGAATCTTGACTTTTTGGATTTGGGTTACAATCGTCTCCGGAGTTTATCTAGAAATGCTTTTGCTGGCCTCTTGAAATTAAAGGAGCTCCACCTGGAGCACAATCAGTTTTCCAAGATCAACTTTGCTCATTTTCCACGTCTCTTCAACCTCCGTTCAATTTACCTACAATGGAACAGGATTCGCTCCATTAGCCAAGGCTTGACATGGACTTGGAGTTCCTTACACAACTTGGATTTATCAGGGAATGATATCCAAGGAATTGAGCCAGGCACATTTAAATGCCTCCCCAATTTGCAAAAACTGAATTTGGATTCCAACAAGCTCACCAACATCTCCCAGGAAACTGTCAATGCATGGATATCACTAATATCCATTACTTTGTCTGGAAATATGTGGGAATGCAGCCGGAGCATTTGTCCTCTGTTTTACTGGCTGAAAAATTTCAAAGGAAATAAGGAGAGCACCATGATATGTGCAGGACCTAAGCACATCCAGGGTGAAAAGGTTAGCGACGCAGTCGAAACATACAACATCTGTTCTGAAATCCAGGTGGTCAATACGGAAAGATCGCATCTGGTGCCCCAAACTCCTCAGAAGCCTCTGATTATCCCTAAACCTACCATCTTCAAACCTGATACCTCTCAGTTCACCCTTGAGACACCAAGCCCTTCTCCAGGGTTTCAGATTCCTGGCACAGACCAAGAGTATGAGCACGTTTCGTTTCACAAAATCATTGCTGGGAGTGTGGCTCTCTTTCTCTCAGTAGCCATGATCCTCTTGGTGATCTATGTGTCTTGGAAACGCTATCCAGCTAGCATGAAGCAACTCCAGCAGCACTCTCTTATGAAGAGGCGGCGGAAAAAGGCCAGAGAGTCAGAAAGACAAATGAATTCCCCTTTACAGGAGTATTATGTGGACTACAAGCCAACAAACTCTGAGACCATGGATATATCGGTTAATGGATCTGGGCCCTGCACATATACCATCTCTGGCTCCAGGGAATGTGAGGTATGA

Related Sequences

XP_004844700.1 Protein

Lrrtm4 PREDICTED: leucine-rich repeat transmembrane neuronal protein 4-like isoform X3 [Heterocephalus glaber]

Length: 518 aa      View alignments
>XP_004844700.1
MGFHLITQLKGMSVVLVLLPTLLLVMLTGAQRACPKNCRCDGKIVYCESHAFADIPENISGGSQGLSLRFNSIQKLKSNQFAGLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSIYLQWNRIRSISQGLTWTWSSLHNLDLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISLISITLSGNMWECSRSICPLFYWLKNFKGNKESTMICAGPKHIQGEKVSDAVETYNICSEIQVVNTERSHLVPQTPQKPLIIPKPTIFKPDTSQFTLETPSPSPGFQIPGTDQEYEHVSFHKIIAGSVALFLSVAMILLVIYVSWKRYPASMKQLQQHSLMKRRRKKARESERQMNSPLQEYYVDYKPTNSETMDISVNGSGPCTYTISGSRECEV