Details from NCBI annotation

Gene Symbol Vamp5
Gene Name vesicle-associated membrane protein 5, transcript variant X2
Entrez Gene ID 101702506

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VAMP5 ENSCPOG00000021802 (Guinea pig)

Gene Details

vesicle-associated membrane protein 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017037, Guinea pig)

Protein Percentage 88.66%
CDS Percentage 90.72%
Ka/Ks Ratio 0.21975 (Ka = 0.0664, Ks = 0.3024)

VAMP5 ENSG00000168899 (Human)

Gene Details

vesicle-associated membrane protein 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000305647, Human)

Protein Percentage 77.59%
CDS Percentage 86.78%
Ka/Ks Ratio 0.37695 (Ka = 0.1195, Ks = 0.317)

Vamp5 ENSMUSG00000073002 (Mouse)

Gene Details

vesicle-associated membrane protein 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000098843, Mouse)

Protein Percentage 88.24%
CDS Percentage 85.95%
Ka/Ks Ratio 0.10062 (Ka = 0.0675, Ks = 0.671)

Vamp5 ENSRNOG00000012659 (Rat)

Gene Details

vesicle-associated membrane protein 5 (Vamp5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016984, Rat)

Protein Percentage 85.29%
CDS Percentage 83.01%
Ka/Ks Ratio 0.11119 (Ka = 0.0946, Ks = 0.8506)

Genome Location

Sequence Coding sequence

Length: 351 bp    Location: 17555988..17546713   Strand: -
>XM_004844604.1
ATGGCAGGGAAAGAGTTGGAGCGATGCCAGCAGCAGGCGAATGAGGTGACAGAAATCATGCTCAACAACTTCGACAAGGTCCTGGAGCGAGACGGGAAGCTGGCGGAGCTGGAGCAGCGTTCAGACCAACTCCTGGACATGAGCTCTGCCTTCAGCAAGACAACCAAGACCCTGGCCCAGAAGAAGCGCTGGGAGAACATCCGCTGCCGGATCTACCTGGGGCTGGTGGTGGCTGGTGCTCTGCTCATCATCCTGATTGTGCTGCTGGTCATCTTTCTCCCACAGAGCAGTGGGGACAGTGGGGCCTCACAGGCCCAGGATGCAGGCACTGCCTCAAGGCCTGGGGACTGA

Related Sequences

XP_004844661.1 Protein

Vamp5 PREDICTED: vesicle-associated membrane protein 5 isoform X2 [Heterocephalus glaber]

Length: 116 aa      View alignments
>XP_004844661.1
MAGKELERCQQQANEVTEIMLNNFDKVLERDGKLAELEQRSDQLLDMSSAFSKTTKTLAQKKRWENIRCRIYLGLVVAGALLIILIVLLVIFLPQSSGDSGASQAQDAGTASRPGD