Details from NCBI annotation

Gene Symbol Ptcd3
Gene Name pentatricopeptide repeat domain 3, transcript variant X2
Entrez Gene ID 101697820

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTCD3 ENSCPOG00000012371 (Guinea pig)

Gene Details

pentatricopeptide repeat domain 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011133, Guinea pig)

Protein Percentage 84.08%
CDS Percentage 88.84%
Ka/Ks Ratio 0.39335 (Ka = 0.0908, Ks = 0.2308)

PTCD3 ENSG00000132300 (Human)

Gene Details

pentatricopeptide repeat domain 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000254630, Human)

Protein Percentage 76.62%
CDS Percentage 83.38%
Ka/Ks Ratio 0.37185 (Ka = 0.141, Ks = 0.3792)

Ptcd3 ENSMUSG00000063884 (Mouse)

Gene Details

pentatricopeptide repeat domain 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000080743, Mouse)

Protein Percentage 73.75%
CDS Percentage 79.89%
Ka/Ks Ratio 0.32349 (Ka = 0.1691, Ks = 0.5229)

Ptcd3 ENSRNOG00000009484 (Rat)

Gene Details

Pentatricopeptide repeat domain 3 (Ptcd3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012622, Rat)

Protein Percentage 74.48%
CDS Percentage 79.06%
Ka/Ks Ratio 0.2577 (Ka = 0.1624, Ks = 0.6303)

Genome Location

Sequence Coding sequence

Length: 2052 bp    Location: 17138066..17108121   Strand: -
>XM_004844589.1
ATGGCAGTTGTACGCTCTGCTTGCTGGCTGCGGGTCCGCAGCGGGCTTCGCTTGCCACTTGCGAGTCGGCGGGTAGGTGTGTGTGAAAGGTCACACAGTTGCAGAGTTGATTCTGGAAATACAGCTTGCCCAAAGGTTGAAGGAACTGACATAACAGGAATTGAAGAAATAGTCATTCCAAAAAAGAAAACTTGGGATAAAGTGGCTGTTCTTCAGGCACTTGCATCCACCGTAAACAGGGATCCCACAGCTGCCCCTTATGCATTTCAAGATGATCCTTACCTCATACCAGCATCTGCTGTGGAATCTCGTTCATTGTTATTGGCAAAGAAGTCCGGGGAAAATGCAGCAAAGTTTATTATTAATTCACATTTCAAATACTTTCAGAAGGACATAGCTGAACCTCATATACCGTGTTTAATGCCTGAGTACTTTGAACCCCAGATAGAAGATATAAGTGAAGCTGCCCTGAAGGAACGAATCAGGCTGAGAAAAGTCAAAGCTTCTGTGGACATGTTTGATCAGCTCTTGCAAGCAGGAACCACTGTCTCTCTTGAAACAACTAATAGTCTCTTGGATTTATTGTGTTACTATGGTGATCAGGAGCCACCAGCTAAATATCATTTTCAACCGACTGAACAGTCAGAAGAATTGGAAGAGGCCACAGAGGAAAATAATGAAAAATCTACGGGGAAGACTGTTCATCAGTTGTCCACTACTTGGAAGACAAATAACAATGCAGAACGAATCTTTGCTCTAATGCCAGAGAAGAACGAACATTCCTACTGCACAATGATCCGGGGAATGGTGAAGCATCAAGCTAATGGACAGGCACTAAATATGTACACCGAGTTGTTAAACAACAGACTCCGTGCTGATGTACACACTTTCAATGCATTGATTGAAGCAACAGCATCGATAGTGAATGAGAAATGTGAGGAGAGGTGGAATAATATGCTGGGTCTGCTGAAACACATGGTTGCACAGAAGGTGAATCCAAATCTACAGACTTTTAATACCATTCTAAAATGTCTGCGAAGATTTCATGCATTTGGAAAATTGCCAGCCTTAGAAACCTTACGTGAAATGAAAGCCATTGGAATAGAACCCTCGCTTGCAACATATCATCATCTTATTCAGGTGTTTTATCAACATGGTAACTCTTTAAAGGAACCCTCTTTCATCATCTACAGTATAATGGATGAATTAGTGGGAAAGAAATTTTCTCCAGTGGATCTAGATGATGATAAGTTTTTTCAGACGGCTATGAATGCTTGCTCATCCCTCAAAGATCTAGACCTTGCTTACCAAGTACATGGCCTGTTAAACACGGGAGACAACTGGAAATTCATTGGATCTGATCTTCAGCGTAATTTCTATTATTCCAGGTTTTTCAGTTTGCTTTGTCTAATGGAACAAATTGATACCACCTTAAAGTGGTATAAAGACCTGATACCTTCGGTGTTCTTTCCCCATTCCCAAGTAGTGATGGCTCTCCTCCATTCTTTAGATGTGGCCAACCGTCTAGAAATGATTCCTCAGATTTGGAAAGATAGTAAAGAATACGGTCACACATTTCGCAGTGAGCTAAAAGAAGAAATCCTGATGCTCATGGCCAGGGATAAACACCCACCACAGCTTCAGATGGCGTTTGCTGATTGTGCTGCTGACATCAAATCTACTTATGAAGCCAAACCTGCTCCCAGTTGGCCAGCCAGTGTTCTCAACTGTATAGCTGCCCTCTTCTTAAGGGCTGAGAGAGCCCAGGAAGCCTGGAAGATGTTGGAACTTTTCAGGAAGCATAATAAAATTCCCAGAAGTGAACTGCTGAGTGAATTTATGGACAGTGCAAAAGTATGCAACAGTCCTGCCAAGGCCATTGAGGTTGTGAAGCTGGCTAGCGCCTTCAGCTTGCCTGTTTGTGAGAGTCTCATACAGAGAGCAGTGACGGAATTTGAAATGGACCCAGAACAAAAGGAAGCCCTGGGCACCCTAACTGCATTGGATGGTGACAGCAGCAGTGATAATGACAGTGACAGTGACGGCAAATGA

Related Sequences

XP_004844646.1 Protein

Ptcd3 PREDICTED: pentatricopeptide repeat domain-containing protein 3, mitochondrial isoform X2 [Heterocephalus glaber]

Length: 683 aa      View alignments
>XP_004844646.1
MAVVRSACWLRVRSGLRLPLASRRVGVCERSHSCRVDSGNTACPKVEGTDITGIEEIVIPKKKTWDKVAVLQALASTVNRDPTAAPYAFQDDPYLIPASAVESRSLLLAKKSGENAAKFIINSHFKYFQKDIAEPHIPCLMPEYFEPQIEDISEAALKERIRLRKVKASVDMFDQLLQAGTTVSLETTNSLLDLLCYYGDQEPPAKYHFQPTEQSEELEEATEENNEKSTGKTVHQLSTTWKTNNNAERIFALMPEKNEHSYCTMIRGMVKHQANGQALNMYTELLNNRLRADVHTFNALIEATASIVNEKCEERWNNMLGLLKHMVAQKVNPNLQTFNTILKCLRRFHAFGKLPALETLREMKAIGIEPSLATYHHLIQVFYQHGNSLKEPSFIIYSIMDELVGKKFSPVDLDDDKFFQTAMNACSSLKDLDLAYQVHGLLNTGDNWKFIGSDLQRNFYYSRFFSLLCLMEQIDTTLKWYKDLIPSVFFPHSQVVMALLHSLDVANRLEMIPQIWKDSKEYGHTFRSELKEEILMLMARDKHPPQLQMAFADCAADIKSTYEAKPAPSWPASVLNCIAALFLRAERAQEAWKMLELFRKHNKIPRSELLSEFMDSAKVCNSPAKAIEVVKLASAFSLPVCESLIQRAVTEFEMDPEQKEALGTLTALDGDSSSDNDSDSDGK