Details from NCBI annotation

Gene Symbol Psd4
Gene Name pleckstrin and Sec7 domain containing 4, transcript variant X4
Entrez Gene ID 101706961

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSD4 ENSCPOG00000011999 (Guinea pig)

Gene Details

pleckstrin and Sec7 domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010797, Guinea pig)

Protein Percentage 84.85%
CDS Percentage 88.1%
Ka/Ks Ratio 0.24128 (Ka = 0.0779, Ks = 0.3228)

PSD4 ENSG00000125637 (Human)

Gene Details

pleckstrin and Sec7 domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000245796, Human)

Protein Percentage 78.78%
CDS Percentage 82.51%
Ka/Ks Ratio 0.228 (Ka = 0.1248, Ks = 0.5474)

Psd4 ENSMUSG00000026979 (Mouse)

Gene Details

pleckstrin and Sec7 domain containing 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000100006, Mouse)

Protein Percentage 72.91%
CDS Percentage 78.12%
Ka/Ks Ratio 0.23834 (Ka = 0.1687, Ks = 0.708)

Psd4 ENSRNOG00000006079 (Rat)

Gene Details

pleckstrin and Sec7 domain containing 4 (Psd4), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008161, Rat)

Protein Percentage 73.08%
CDS Percentage 78.77%
Ka/Ks Ratio 0.26076 (Ka = 0.1668, Ks = 0.6395)

Genome Location

Sequence Coding sequence

Length: 2850 bp    Location: 13252405..13288672   Strand: +
>XM_004844540.1
ATGATGGGTGACGACAGACTCTTGGACCACCCCCAGCCTGTGGAATTGCTCAGTATCTGCTCAGGAGACAGCCTGCAGTCCCACCCAGGAGCATGCCTGAGGGAGATGGGCCACGACCCAGGTCCTCTGGAATCTCGCCAGGAGCACACCTGGACCTTCGAACCTCCTGAACCCACCAGGACAGATGCTCCTCTCAGGGGCTCTGCTATGGAGCCTGCCTACTTGGGAAGCTGCTCTTCGCAGGAGGGGCTCAGGCCAACAGCAGCATCGCCAGAGGCACAGGGGGACAGCTGTCCTCCGGGGACTCCGCTGCAGAGCCAGAGCTCGTCCACACAGGTGATGTTCTGGGCTGGCATCTTACAGGCCCAGATGTGCGTCCTGGACCTGGAGGAAGAGCTAGAAAAGACGGAAGGACTCAAGACCAGGCTGAGGTGCTGCCTCCCCTCATCCACTCCAGACCTCCCTGGTGACACAGGCCTGCACCCCAGCCCACCCACCGAGGAGGACTCTGGGGAAGACAGCAGTGGGCCTGAGGGGGAGAGCAAAGCCTGGCCCAGGGAAGGATCCTCCCCAGAGTGGGGTCCTGAGGAGGAGAGTGTGTTCTTCGACAACCCCCTCTTCCTGGAGAGCCCTTCTTCTGACATCAGTGTTTCCAGGGAGTGCTTTTCCTGGGGCTTCCCAGACTCCCAGGCAGATGTGAGGCCTGGGGCTGACTGGCCATTCCCACACAACAGTGGGCCCTGGGAGCTAGAAAGGGCGCTGGATTTGGGGGGCAGCACCGCTGGATCCAGTGGGTGCACCACCCCTCCATTCCCTGTGCCTCCCTACAAAACACACCCTTTCTGCTGGGCCTCGGTGGCCACTGCTGAGGGGACTCCCACAGCACCTCCTGCTCAGGAGGAAGGCGAGGCCCCACCAAGCCCTGAGGGCTGGCAGATAGAAGAAGGTCCTTCCTGGCCCCAGGATAGAGGTGAACGGGATGCCAGGTGTCTCCAGGAACCTGCTACCTGCACCTTCACTCCCAGCCCCTGTGGAAGCCCAGTATCCTCATCTGAGCCTGGCAGCCCTGAGTCTGAGGGCAGAGGCCCCGGCCCCAGGCCCACCCCAGTGTCGTCCCAGGAGGGCAGCCCCCAGCTCCAGCACCACAGCCCTGGCATTTTCCCCAAGTGGCCACTAGATGCCTCACACCCTTTGCTCCTGGAAACAGATGGGATAGAGCCAAGTTCCCCGAAGAAAGAAGAGGCTGGGGAGGCCCCAGACCCAGGGCAGGAAGTAGAGAATGAAGGCACAGCTAGGATTGCTGCAGGCACCCAGCCCGACGTTCACTGGACTTCTGCAGAAGGGCCTCCTGAGAGCCCCATGCCCCAGGCACAGTCCCCCAAGGAAGACCAGAGGCCACCAGCTGGAGATAAGCTGGCGAATGGTGTCAGGAATGACAAAGTGGCCTGGAACTTGGCTTCCCGGCTCTATCACCTGGATGGCTTCCGGAAGTCAGAAGTGGCTGCCTACCTGCAGAAGAACAATGACTTCAGCAGGGCTGTGGCTGAGGAGTACTTGTCCTTCTTCCAGTTCGGAGGCCAGAGCCTGGACTGCGCCCTCCGGGGCTTCCTCCAGTCCCTGGTTCTCAGCGGGGAGACACAAGAGCGGGAGCGAATCCTCTACCAGTTTTCTAGACGCTTCCACCACTGCAACCCTGAGACTTTCCCCTCAGTAGATTCCATACACACCTTGACCTGTGCCATCATGCTCCTTAACACGGACCTGCACGGACAGAACATCGGGAAGAGCATGAGCTGCCAGGAATTCATAGCCAACCTGAACGGCCTGCAGGATGGCGGGAACTTCCGCAAGGAGCTGCTGAAGGCCCTCTACTGGTCTATTCGAAATGAGAAGCTTGAGTGGGTTATGGATGAAGAAGAGCCAGCCAGAGCTGAGAAGGCCCAGCCATCTCCCCCAGCTGGCAAGATGAGTAACCCCTTTCTCCAGCTGGCTCAGGACCCCAAGGTACCCACCTACAAGCAGGGCATCCTGGCACGGAAGATGCATCATGATGCGGATGGCAAGAAGACACCATGGGGCAAGCGCGGCTGGAAGATGTTCCACACCTTACTGCGAGGGATGGTTCTCTACTTCCTGAAGGGAGAGGACCCATCCTTGGAGGGGGAGAGTTTGGTTGGGCAGATGGTGGATGAGCCTGTTGGGGTGCACCATGCACTGGCCACCCCTGCCACCCACTACACCAAGAAGCCTCATGTCTTCCAGCTGCGGACTGCAGACTGGCGCCTCTACCTCTTCCAAGCACCCACAGCCAAGGAGATGACTTCCTGGATTGCACGTGTCAACCTGGCGGCAGCCACGCACTCAGCACCGCCCTTCCCTGCTGCTGTAGGCTCCCAGCGCCGGTTTGTGCGGCCCATCCTGCCAATGGGGCCGGCCCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACGCCGCCTCTGATGACTTGATGGATCTGCAGCGGAACTTACCTGAGCGGCGGGGCCGCAGCCGAGAGCTGGAAGAGCACCGCTTGCGGAAGGAGTACCTGGAGTACGAGAAAACCCGCTACGAGACGTACGTGCAGCTGCTGGTGGCTCGTCTGCACTGCCCCTCCGGGGACCTGGATCTCTGGGAGGAGCAGCTGGGGAGGGAAGCTGAAGACACCCAGGAACCCAAACCCAGCCTGAAGAAGTCCCACTCGAGCCCCTCCCTGCACCAGGATGAGGCCCCCACCACAGCCAAGGTGAAGCGCAACATCTCTGAGCGCAGAACCTACCGCAAGATCATCCCCAAGAGGAACCGCAATCAGCTGTGA

Related Sequences

XP_004844597.1 Protein

Psd4 PREDICTED: PH and SEC7 domain-containing protein 4 isoform X4 [Heterocephalus glaber]

Length: 949 aa      View alignments
>XP_004844597.1
MMGDDRLLDHPQPVELLSICSGDSLQSHPGACLREMGHDPGPLESRQEHTWTFEPPEPTRTDAPLRGSAMEPAYLGSCSSQEGLRPTAASPEAQGDSCPPGTPLQSQSSSTQVMFWAGILQAQMCVLDLEEELEKTEGLKTRLRCCLPSSTPDLPGDTGLHPSPPTEEDSGEDSSGPEGESKAWPREGSSPEWGPEEESVFFDNPLFLESPSSDISVSRECFSWGFPDSQADVRPGADWPFPHNSGPWELERALDLGGSTAGSSGCTTPPFPVPPYKTHPFCWASVATAEGTPTAPPAQEEGEAPPSPEGWQIEEGPSWPQDRGERDARCLQEPATCTFTPSPCGSPVSSSEPGSPESEGRGPGPRPTPVSSQEGSPQLQHHSPGIFPKWPLDASHPLLLETDGIEPSSPKKEEAGEAPDPGQEVENEGTARIAAGTQPDVHWTSAEGPPESPMPQAQSPKEDQRPPAGDKLANGVRNDKVAWNLASRLYHLDGFRKSEVAAYLQKNNDFSRAVAEEYLSFFQFGGQSLDCALRGFLQSLVLSGETQERERILYQFSRRFHHCNPETFPSVDSIHTLTCAIMLLNTDLHGQNIGKSMSCQEFIANLNGLQDGGNFRKELLKALYWSIRNEKLEWVMDEEEPARAEKAQPSPPAGKMSNPFLQLAQDPKVPTYKQGILARKMHHDADGKKTPWGKRGWKMFHTLLRGMVLYFLKGEDPSLEGESLVGQMVDEPVGVHHALATPATHYTKKPHVFQLRTADWRLYLFQAPTAKEMTSWIARVNLAAATHSAPPFPAAVGSQRRFVRPILPMGPAQSSLEEQHRSHENCLDAASDDLMDLQRNLPERRGRSRELEEHRLRKEYLEYEKTRYETYVQLLVARLHCPSGDLDLWEEQLGREAEDTQEPKPSLKKSHSSPSLHQDEAPTTAKVKRNISERRTYRKIIPKRNRNQL