Sequence details NCBI ID: XM_004844530.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Il1b
Gene Name interleukin 1, beta
Entrez Gene ID 101704309

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

IL1B ENSCPOG00000001975 (Guinea pig)

Gene Details

Cavia porcellus interleukin 1 beta (Il1b), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001784, Guinea pig)

Protein Percentage 82.33%
CDS Percentage 87.97%
Ka/Ks Ratio 0.38288 (Ka = 0.0974, Ks = 0.2544)

IL1B ENSG00000125538 (Human)

Gene Details

interleukin 1, beta

External Links

Gene Match (Ensembl Protein ID: ENSP00000263341, Human)

Protein Percentage 70.79%
CDS Percentage 81.77%
Ka/Ks Ratio 0.66334 (Ka = 0.1978, Ks = 0.2982)

Il1b ENSMUSG00000027398 (Mouse)

Gene Details

interleukin 1 beta

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028881, Mouse)

Protein Percentage 72.18%
CDS Percentage 80.83%
Ka/Ks Ratio 0.32248 (Ka = 0.1631, Ks = 0.5059)

Il1b ENSRNOG00000004649 (Rat)

Gene Details

interleukin 1 beta (Il1b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006308, Rat)

Protein Percentage 70.3%
CDS Percentage 80.45%
Ka/Ks Ratio 0.42197 (Ka = 0.1841, Ks = 0.4363)

Genome Location

Sequence Coding sequence

Length: 804 bp    Location: 12858416..12852131   Strand: -
Raw sequence   
>XM_004844530.1
ATGGCAGCAGTTCCTGAATTCAGCAATGAAGTGACAGCTTACCACAGTGATGAGAATGAAATGTTCTTTGAGGTCGATGGCCCCAAACAGATGAAGCATTGCTTCCAAGACCTGGACCTCTGCTCTCTGGATGAGGGCATCGAGCTACAAATCTCCCACCAGCACTTCAAGAAGAGTTTCCAGCAGGTGGTGTCACTCATTGTGGCTGTGGAGAAGCTGAGGAAGGAACTAGTTCCTTGCCCATGGACCTTCCAGGATAATGACCTGAGAACCTTCTTTCCCTTCATCTTTGAAGAAGAACCCATCATCTGTGACACGTGGGATGACAAGTATGAGTGTGATGCACCCGTCCTAACACGGAACTGCAGACTCCAGGATACACAACATAAACACCTGGTGTTGTCTGACCCATGTGAACTGAAAGCCCTTCATCTCAACGGAGAGAATCTGAACCGGCAAGTGGTGTTCTCCATGAGCTTTGTACAAGGAGAAAGAAGAGATGACAAAATCCCTGTTGCTTTGGGCCTCAAGGGAAAGAATCTGTACCTGTCCTGTGTGATGAAAGATGATAAACCTGTCCTACAGCTTGAGAGTGTAGACCCCAAACAGTACCCAAAGAAGAAGATGGAAAAGCGATTCGTCTTCAACAAGATAGATGGCAAAAGCACGGTGGAATTTGAGTCTGCTCAGTACCCCAACTGGTACATCAGCACCTCTCAAGCAGAACACATGCCTGTCTTCCTGGGAAATAACCATGGTGGCCAGGACATAACTGACTTCAGCATGGAATTCATGTCTTCCTAA

Related Sequences

XP_004844587.1 Protein

Il1b PREDICTED: interleukin-1 beta [Heterocephalus glaber]

Length: 267 aa      View alignments
>XP_004844587.1
MAAVPEFSNEVTAYHSDENEMFFEVDGPKQMKHCFQDLDLCSLDEGIELQISHQHFKKSFQQVVSLIVAVEKLRKELVPCPWTFQDNDLRTFFPFIFEEEPIICDTWDDKYECDAPVLTRNCRLQDTQHKHLVLSDPCELKALHLNGENLNRQVVFSMSFVQGERRDDKIPVALGLKGKNLYLSCVMKDDKPVLQLESVDPKQYPKKKMEKRFVFNKIDGKSTVEFESAQYPNWYISTSQAEHMPVFLGNNHGGQDITDFSMEFMSS