Details from NCBI annotation

Gene Symbol Polr1b
Gene Name polymerase (RNA) I polypeptide B, 128kDa, transcript variant X1
Entrez Gene ID 101702994

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

POLR1B ENSCPOG00000015744 (Guinea pig)

Gene Details

polymerase (RNA) I polypeptide B, 128kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014197, Guinea pig)

Protein Percentage 95.77%
CDS Percentage 92.69%
Ka/Ks Ratio 0.07691 (Ka = 0.0201, Ks = 0.2611)

POLR1B ENSG00000125630 (Human)

Gene Details

polymerase (RNA) I polypeptide B, 128kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000263331, Human)

Protein Percentage 91.1%
CDS Percentage 89.54%
Ka/Ks Ratio 0.12316 (Ka = 0.0443, Ks = 0.3596)

Polr1b ENSMUSG00000027395 (Mouse)

Gene Details

polymerase (RNA) I polypeptide B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099494, Mouse)

Protein Percentage 89.34%
CDS Percentage 84.73%
Ka/Ks Ratio 0.08395 (Ka = 0.0566, Ks = 0.6736)

Polr1b ENSRNOG00000018349 (Rat)

Gene Details

polymerase (RNA) I polypeptide B (Polr1b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024882, Rat)

Protein Percentage 84.48%
CDS Percentage 81.89%
Ka/Ks Ratio 0.14703 (Ka = 0.1, Ks = 0.68)

Genome Location

Sequence Coding sequence

Length: 3408 bp    Location: 12602097..12625200   Strand: +
>XM_004844526.1
ATGGATCCCAGCGGCCGGTGGCGGAACCTGCCGGGCGGGCCTAGCCTAAAGCATCTGACCAACCCCTCGTATAGGATCCCGCGGGAGCAGCAGAAGGCGGCGTTGCAAGAGCTGACGCGGGCGCACGTGGACTCCTTCAATTACGCCGTGTGCGAGGGGCTCAGCCAAGCGGTGCAGGCTATTCCTTCCTTTGAATTTGCTTTCAAAGATGAGCGAATCTCTTTTACTATTGTGGATGCTGTCATCAGTCCACCCACAGTTCCTAAAGGGACCATTTGCAAAGAGCTCAGTGTTTATCCAGCAGAATGCCGAGGCCGAAGGAGTACTTACCGGGGAAAGCTGACAGCCGATATCAGCTGGTCGGTGAATGGAATCTCAAGAGGAGTCATTAAGCAGTTTCTTGGCCATGTTCCCATCATGGTGAAGTCCAAGCTTTGCAACTTGCACAACCTTCCTCCAAAGGCCCTCATTGAACACCATGAGGAGGCAGAGGAAATGGGAGGATATTTTATAATCAATGGCATTGAAAAGGTCATCCGAATGCTAATTATGCCTAGGAGAAATTTCCCCATTGCGTTGATAAGACCAAAGTGGAAAAGCAGAGGGCCAGGTTATACTCAGTTTGGGGTTTCTATGCACTGTGTGAGGGGAGACCATTCTGCTGTCAATATGAACCTTCACTATTTGGAAAATGGCACAGTTATGTTAAACTTCATTTACCGGAAAGAACTGTTTTTTCTTCCTTTGGGATTTGCTCTTAAGGCACTGGTCAGCTTTTCAGATTATCAGATTTTTCAGGAGCTTGTCAAGGGAAAAGAGGATGACTCTTTCTTTAGGAACTCTGTTTCTCAGATGCTAAGGATCGTAATGGAAGAGGGTTGTTCCACACAAAAACAGGTCCTTAACTATCTAGGTGAATGCTTCAGAGTAAAGCTCAATCTTCCTGACTGGTACTCAAATGAACAAGCTACAGAGTTCCTGTTTGACCAGTGTATCTGCATCCACTTGAAATCCAATATTGAAAAGCTTCACTTGCTTTGTTTCATGACCCGGAAGCTCTTTGCTTTAGCCAAAGGAGAGTGTATGGAGGAGAATCCTGATAGTTTAGTAAATCAAGAAATCCTTACTCCTGGTCAGCTCTTCCTTATGTTTCTAAAGGAAAAAATGGAAGCTTGGTTAATGTCTATTAAAATAGCATTAGATAAGAGGGCTCAGAAAACCAATGTATCCATAAACACTGAAAATTTGATGAAGATTTTTAGTATGGGAGGAGACTTGACAAGACCATTTGAATATCTTCTTGCTACTGGGAATCTGCGTTCAAAAACAGGTCTTGGCTTCATGCAAGATTCTGGACTTTGTGTTGTGGCTGACAAGCTGAACTTCATTCGCTATCTCTCCCATTTCCGCTGTGTGCACAGAGGAGGTGATTTTGCTAAGATGAGGACCACCACAGTACGCAGGCTGCTGCCAGAGTCCTGGGGCTTCCTTTGTCCCGTAAACACCCCAGATGGGGCACCATGTGGTCTAATGAACCACCTTACTGCCATATGTGAGGTCGTCACACAGTTTGCATATACAACGTCTATTCCAGCTTTGCTCTGCACCTTGGGGGTCATGCCTGTTGATGGAACACCACATTGCCCATACAGTGAGTGCTATCCTGTCCTTCTGGATGGCGTCATGGTGGGCTGGGTGGACAAGGAGCTTGCTCCTGGCATCGCAGATTCTCTCCGTCGTTTTAAGGTGTTAAGAGAAAAAAGAATTCCTCCCTGGATGGAAGTGGCTCTTGTCCCCATCACAGGAAAATCAAGTCTGTATCCAGGACTCTTCCTTTTTACCACTCCTTGCAGACTGGTACGCCCTGTGCAGAATTTGGAATTAGGCAAAGAAGAACTAATTGGAACCATGGAACAGCTCTTCATGAACATTGCCATCTTTGAGGATGAGGTTTGTGCTGGAGTTAACACGCACCAGGAGCTCTTCCCACACAGCCTGCTGAGTGTGATCGCCAATTTTATCCCCTTCTCTGATCACAACCAGAGTCCAAGGAACATGTACCAGTGCCAAATGAGTAAGCAAACCATGGGCTTTCCACTTCTCACTTACCAAGACCGATCAGATAATAAACTGTATCGCCTTCAGACTCCACAAAGCCCCTTAGTAAGACCATACATGTATGACTACTATGACATGGATAACTATCCAATTGGGACAAATGCCATTGTTGCTGTGATTTCTTATACTGGCTATGATATGGAAGATGCCATGATTGTGAATAAGTCTTCTTGGGAACGTGGCTTTGCCCATGGAAGTGTCTATAAGACAGAGTTCATAAACCTATCTGAAAAATTTAAGCAAGGAGCTGACAGTCTGGTGTTTGGAGTCAAACCTGGTGACCCACGTATCATGCAGAAGTTAGATGATGATGGACTGCCATTTATAGGAGCAAAACTACAATATGGAGATCCACATTACGGCTACCTAAATCTCAGCACAGGGGAAAGCTATGTGGTATACTATAAGAGTAAAGAAAATTGTATTGTGGATAACATCAAAGTGTGTAGTAATGACTCAGGGAGTGGAAAATTCAAGTGTATTTGCATCACAATGAGAGTCCCTCGGAACCCAACTATCGGAGATAAATTTGCCAGTCGACATGGGCAGAAGGGCATTTTGAGCAGATTGTGGCCAGCTGAGGACATGCCTTTTACTGAGAGTGGGATGGTGCCAGACATTCTGTTCAATCCCCACGGTTTTCCATCTCGTATGACCATTGGTATGTTAATTGAGAGCATGGCTGGCAAGTCTGCAGCTTTGCATGGTCTCTGCCATGATGCTACACCCTTCATCTTCTCTGAGGAGAACTCAGCCTTGGAATACTTTGGTGAGATGTTAAAGGCTGCTGGCTACAATTTCTATGGCACTGAGAGGTTGTATAGTGGCATCAGTGGGGTGGAACTAGAAGCAGACATATTCATAGGTGTGGTTTATTACCAACGCTTACGTCACATGGTATCAGACAAATTTCAAGTTAGAACAACTGGAGCCAGGGACAAAGTTACCAACCAACCTATTGGAGGAAGAAACGTCCAAGGAGGAATCCGTTTTGGGGAGATGGAACGGGACGCTCTTTTGGCTCATGGTACATCTTTTCTGCTTCATGACCGCCTCTTCAACTGCTCTGATCGCTCGGTGGCACATGTGTGTGTGAAGTGTGGCAGTTTACTCTCTCCACTGCTGGAGAAGCCACCCCCTTCTTGGTCTGCCATGAGAAACAGAAAATACAACTGCACTGTTTGTAATCGCAGTGACACTATTGATACTGTCTCTGTGCCTTATGTTTTCCGGTATTTTGTGGCTGAACTGGCAGCAATGAACATCAGAGTGAAACTGGATGTCATTTAA

Related Sequences

XP_004844583.1 Protein

Polr1b PREDICTED: DNA-directed RNA polymerase I subunit RPA2 isoform X1 [Heterocephalus glaber]

Length: 1135 aa      View alignments
>XP_004844583.1
MDPSGRWRNLPGGPSLKHLTNPSYRIPREQQKAALQELTRAHVDSFNYAVCEGLSQAVQAIPSFEFAFKDERISFTIVDAVISPPTVPKGTICKELSVYPAECRGRRSTYRGKLTADISWSVNGISRGVIKQFLGHVPIMVKSKLCNLHNLPPKALIEHHEEAEEMGGYFIINGIEKVIRMLIMPRRNFPIALIRPKWKSRGPGYTQFGVSMHCVRGDHSAVNMNLHYLENGTVMLNFIYRKELFFLPLGFALKALVSFSDYQIFQELVKGKEDDSFFRNSVSQMLRIVMEEGCSTQKQVLNYLGECFRVKLNLPDWYSNEQATEFLFDQCICIHLKSNIEKLHLLCFMTRKLFALAKGECMEENPDSLVNQEILTPGQLFLMFLKEKMEAWLMSIKIALDKRAQKTNVSINTENLMKIFSMGGDLTRPFEYLLATGNLRSKTGLGFMQDSGLCVVADKLNFIRYLSHFRCVHRGGDFAKMRTTTVRRLLPESWGFLCPVNTPDGAPCGLMNHLTAICEVVTQFAYTTSIPALLCTLGVMPVDGTPHCPYSECYPVLLDGVMVGWVDKELAPGIADSLRRFKVLREKRIPPWMEVALVPITGKSSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQLFMNIAIFEDEVCAGVNTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMSKQTMGFPLLTYQDRSDNKLYRLQTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKTEFINLSEKFKQGADSLVFGVKPGDPRIMQKLDDDGLPFIGAKLQYGDPHYGYLNLSTGESYVVYYKSKENCIVDNIKVCSNDSGSGKFKCICITMRVPRNPTIGDKFASRHGQKGILSRLWPAEDMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALEYFGEMLKAAGYNFYGTERLYSGISGVELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPLLEKPPPSWSAMRNRKYNCTVCNRSDTIDTVSVPYVFRYFVAELAAMNIRVKLDVI