Details from NCBI annotation

Gene Symbol Slc5a7
Gene Name solute carrier family 5 (choline transporter), member 7
Entrez Gene ID 101723438

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC5A7 ENSCPOG00000027203 (Guinea pig)

Gene Details

solute carrier family 5 (sodium/choline cotransporter), member 7

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018049, Guinea pig)

Protein Percentage 95.67%
CDS Percentage 90.83%
Ka/Ks Ratio 0.05492 (Ka = 0.022, Ks = 0.4003)

SLC5A7 ENSG00000115665 (Human)

Gene Details

solute carrier family 5 (sodium/choline cotransporter), member 7

External Links

Gene Match (Ensembl Protein ID: ENSP00000264047, Human)

Protein Percentage 92.04%
CDS Percentage 84.37%
Ka/Ks Ratio 0.05771 (Ka = 0.0431, Ks = 0.7468)

Slc5a7 ENSMUSG00000023945 (Mouse)

Gene Details

solute carrier family 5 (choline transporter), member 7

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000093379, Mouse)

Protein Percentage 92.21%
CDS Percentage 83.74%
Ka/Ks Ratio 0.05767 (Ka = 0.0456, Ks = 0.7913)

Slc5a7 ENSRNOG00000010597 (Rat)

Gene Details

solute carrier family 5 (sodium/choline cotransporter), member 7 (Slc5a7), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014548, Rat)

Protein Percentage 92.21%
CDS Percentage 83.62%
Ka/Ks Ratio 0.05604 (Ka = 0.0454, Ks = 0.8108)

Genome Location

Sequence Coding sequence

Length: 1737 bp    Location: 11347550..11368710   Strand: +
>XM_004844499.1
ATGGCTTTCCACGTGGAAGGGCTGGTCGCCATCGTGGTGTTCTACCTGGTCATCCTGCTGGTGGGCATCTGGGCTGCGTGGAGAACCAAGAACAGCGGCAGCGCAGAGGAGCGCAGCGAGGCCATCATTGTGGGAGGCCGCGACATAGGCCTGCTGGTGGGGGGCTTCACCATGACAGCTACCTGGGTCGGAGGAGGGTACATCAACGGCACAGCGGAAGCAGTGTACGTGCCAGGCCATGGCCTCGCATGGGCTCAGGCACCCATCGGATATTCTCTTAGTCTGATTGTAGGAGGTCTATTCTTTGCCAAACCTATGCGCTCCAAGGGCTACGTGACCATGTTAGACCCGTTCCAGCAGATCTACGGGAAGCGCATGGGCGGCTTACTGTTCATCCCTGCACTCATGGGAGAAATGTTCTGGGCAGCAGCGATTTTCTCTGCCTTAGGGGCCACCATCAGTGTGATCATCGACGTGAACATGCACGTGTCCGTCATCGTGTCTGCACTCATTGCCATCCTGTACACACTGGTGGGTGGCCTCTACTCTGTGGCCTACACGGATGTCGTTCAGCTCTTCTGCATATTCCTAGGACTGTGGATCAGCGTCCCCTTTGCCCTGTCTCATCCTGCGGTGGCCGACATCGGGTTCACGGCAGTGCACACCAAGTTCCAGGATCCCTGGCTGGGAACCATTGAACCCTTCGAGATCTACACTTGGTTGGACAACTTCCTGCTGCTGATGCTGGGCGGAATCCCGTGGCAGGCCTACTTCCAGAGGGTGCTGTCCTCGTCCTCAGCCACCTATGCGCAAGTGCTGTCCTTCCTGGCAGCCTTTGGGTGCCTGGTGATGGCTCTCCCAGCAGTGCTCATTGGGGCCATTGGAGCCTCCACAAACTGGAACCAGACCTCCTTTGGGCCTCTGGATCCCAAGGACAAGGGCGAGGCAGACATGATCCTCCCGATTGTGTTGCAGTACCTCTGCCCTGTGTACATCTCCTTCTTTGGCCTGGGTGCAGTGTCCGCTGCTGTCATGTCCTCAGCCGACTCATCCATCCTGTCGGCAAGTTCAATGTTTGCAAGGAACATCTACCAGCTATCCTTCAGACAAAATGCATCAGACAAAGAAATTGTCTGGGTCATGCGAATCACAGTGTTTGTGTTTGGAGCATCTGCCACAGCCATGGCCTTGCTGACCAAGACTGTATATGGGCTCTGGTACCTCAGCTCTGACTTGGTCTACATCATCATCTTCCCACAGCTCCTGTGTGTGCTCTTCATCAAGGGGACCAACACATATGGGGCAGTGGCAGGGTATGTGGCAGGGATCTTCCTGAGAATAACAGGAGGGGAGCCCTATCTGTACCTGCAACCTCTGATCTACTACCCTGGGTACTACATGGACAACGGTATCTACAACCAGAGGTTCCCATTTAAGACCCTTGCCATGGTGACCTCATTCCTAGTCAACACCTGTGTCTCCTATCTAGCCAAGTATCTATTTGAAAGTGGAACCTTGCCACCAAAATTGGATGTGTTTGATGCTGTTGTTGCAAGGCACAGTGAAGAAAACATGGATAAGACAATTCTGGTCAGAAATGAAAATATTAAATTAGATGAACTTGCACCTGTGAAACCTCGACAGAGCCTAACTCTGAGCTCAACGTTCACCAATAGAGAGGCACTCCTTGAAGTGGATTCCAGCCCAGAAGGATCAGGGACTGAGGACAACTTATAA

Related Sequences

XP_004844556.1 Protein

Slc5a7 PREDICTED: high affinity choline transporter 1 [Heterocephalus glaber]

Length: 578 aa      View alignments
>XP_004844556.1
MAFHVEGLVAIVVFYLVILLVGIWAAWRTKNSGSAEERSEAIIVGGRDIGLLVGGFTMTATWVGGGYINGTAEAVYVPGHGLAWAQAPIGYSLSLIVGGLFFAKPMRSKGYVTMLDPFQQIYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVIIDVNMHVSVIVSALIAILYTLVGGLYSVAYTDVVQLFCIFLGLWISVPFALSHPAVADIGFTAVHTKFQDPWLGTIEPFEIYTWLDNFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCLVMALPAVLIGAIGASTNWNQTSFGPLDPKDKGEADMILPIVLQYLCPVYISFFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFRQNASDKEIVWVMRITVFVFGASATAMALLTKTVYGLWYLSSDLVYIIIFPQLLCVLFIKGTNTYGAVAGYVAGIFLRITGGEPYLYLQPLIYYPGYYMDNGIYNQRFPFKTLAMVTSFLVNTCVSYLAKYLFESGTLPPKLDVFDAVVARHSEENMDKTILVRNENIKLDELAPVKPRQSLTLSSTFTNREALLEVDSSPEGSGTEDNL