Sequence details NCBI ID: XM_004844482.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tgfbrap1
Gene Name transforming growth factor, beta receptor associated protein 1, transcript variant X3
Entrez Gene ID 101717957

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TGFBRAP1 ENSCPOG00000001606 (Guinea pig)

Gene Details

transforming growth factor, beta receptor associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001448, Guinea pig)

Protein Percentage 90.3%
CDS Percentage 88.12%
Ka/Ks Ratio 0.07695 (Ka = 0.0485, Ks = 0.6302)

TGFBRAP1 ENSG00000135966 (Human)

Gene Details

transforming growth factor, beta receptor associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000377027, Human)

Protein Percentage 86.23%
CDS Percentage 84.21%
Ka/Ks Ratio 0.09362 (Ka = 0.0719, Ks = 0.7677)

Tgfbrap1 ENSMUSG00000070939 (Mouse)

Gene Details

transforming growth factor, beta receptor associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000092624, Mouse)

Protein Percentage 85.76%
CDS Percentage 83.82%
Ka/Ks Ratio 0.09519 (Ka = 0.0747, Ks = 0.7847)

Tgfbrap1 ENSRNOG00000024562 (Rat)

Gene Details

transforming growth factor, beta receptor associated protein 1 (Tgfbrap1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000056202, Rat)

Protein Percentage 90.57%
CDS Percentage 85.59%
Ka/Ks Ratio 0.05911 (Ka = 0.0465, Ks = 0.7863)

Genome Location

Sequence Coding sequence

Length: 2574 bp    Location: 9432450..9384997   Strand: -
Raw sequence   
>XM_004844482.1
ATGATGAGCATCAAGGCCTTCACACTGGTCTCTGCCGTTGAGCGGGAGCTTCTGATGAATGACCAGGAGCGCGTCAACATCGAGTGTGTGGAGTGCTGTGGCCGGAACCTCTACGTGGGCACCAGTGACTGCTTCATCTACCACTTCCTACTGGAGGAGAAGGTGTTGCCCTCAGGGACCGTAGCCTTTACAGCCACCAAGCAGCTACACAGACACCTGGGATTCAAGAAGCCTGTGAGTGAACTACGGGCAGCCTCGGCCCTCGACAGGCTGCTGGTGCTCTGCGACAGCTGCATCTCCCTGGTCAGCATGCACAGCCTGGAACCCGTGCCCTCGGGTGCACGCATCAAAGGGGCCTCTACCTTCGCGCTCAACGAGAACCCCGTGGGTGGGGACCCATTCTGCGTGGAAGTCTGCATCCTCTCCATCAAGCGCAGGACCATCCAGGTGTTCCTGGTGTACGAGGATCGTGTGCAGATTGTCAAGGAGGTGTCCACGCCGGAGCAGCCCCTGGCTGTGGCTGTGGATGGCCACTTCCTATGCCTGGCCTTGAGCACACAGTACATCATCCTCAACTACAACACAGGCTTCTCACAGGACTTGTTTCCCTACTGCAGTGAGGAGAAGCGGCCAATTGTCAAGAGGATCGGCAGGCAGGAGTTCCTGCTGGCTGGCCCAGGTGGCCTGGGCATGTTTGCCACTGTGGCCGGGATATCCCAGCGGGCTCCTGTGCACTGGTCGGAGAACGTGATCGGGGCGGCTGTGTGCTTCCCGTACGTCATCGCGCTCGACAATGAGTTCATCACAGTGCACAGCATGCTGGACCAGCAGCAGAAGCAGACCCTGCCCTTTAAGGAAGGCCACATCCTGCAGGACTTCGAAGGAAGAGTGATCGTTGCCACAAGTAAAGGAGTCTACATCTTGGTCCCATTACCTCTGGAAAAACAAATACAGGATCTGCTGGCAAGCCACAGAGTGGAGGAGGCTTTGGTCTTGGCGAAAGGAGCCCGGAGGAACATTCCAAGGGAAAAATTTCAGGTGATGTACAGAAGGATTCTGCAGCAGGCTGGCTTCATCCAGTTTGCTCAGCTTCAGTTCCTGGAAGCTAAAGAGCTCTTCAGAAGCGGGCACCTTGATGTCCGGGAACTGATCTCCCTGCACCCCTTCCTGCTGCCCACCTCCTCCTCCTTCACCCGCTGTCACCCTCCACTCCATGAGTATGCAGACCTGAACCAGCTGACGCAGGGCGACCAGGAGAAGATGGCCAAGTGCAAGCGCTTCCTCATGAGCTACCTGAATGAGGTCCGAAGCACTGAGGTGGCCAATGGCTACAAGGAGGACATTGACACGGCCCTACTCAAGCTGTATGCGGAGGCTGACCATGACAGCCTGCTGGACCTCCTGGTCACTGAGAACTTCTGCCTTCTGACAGACAGTGCAGCCTGGCTGGAGAAGCACAGAAAGTATTTTGCACTGGGGCTGCTCTACCACTACAATAAGCAAGATGCTGCTGCAGTTCAGTTGTGGGTGAACATTGTGAATGGAGATATCCAGGACTCCACGCGCTCTGACCTGTATGAATACGTCGTCGATTTTCTGACCTACTGCTCAGACCAGCAGCTGGTGTGGACCTATGCCGACTGGGTCCTACAGAAAAGCGAGGAGGTTGGAGTTCAGGTCTTCACCAAGAGATCTGTGGATGAGCAGCAGCAGAACAGCTTTAATCCAGACAATGTCATCACCTGCCTTAAGAAATACCCCAGAGCCCTGGTCAAGTACCTGGAGCATCTGGTAGTAGACAGGAGCATGCAGAAGGAAGAGTACCACACTCAACTAGCCATGCTCTACCTGGAGGAGCTGCTGCAGCAGAGGGTGGCCACCAGCAGCAGTGATGCTGCAACCACCGAGATGCAGACCAAGCTGCGGCACCTGCTCCAAAAATCTGACCTGTACCGAGTCCACTTCCTGATAGAGCGGATCCAGGGCGCTGGGCTGCCTGTGGAGCGCGCCATCCTGCACGGGAAACTGGGTGAGCACGAGCAGGCCCTGCGCATCCTGGTGCATGAGCTGGGGGACACAGCGGCGGCGGAGGACTACTGCCTGTGGAGCTCCGAGGGCCAGGATGCGCCCTGCCGCCAGCGCCTCTTCCACACGCTGCTCACCATGTACCTGCAGGCCGGGCCCTTGGCCCCTGAGCTCACTGTGGCTGCCGTAGACCTGCTCAACCGCCACACCTCTGAGTTTGATGCCACCCAGGTGCTGCAGCTGCTACCCGGCTCCTGGTCGGTGCAGCTGCTCCGCCCATTCCTCACCGGGGCCGTCCGGGGCAGCATCCACACCAGGAGGACTGCACAGGTGGCTCTTGGCCTGGCCAGGTCGGAAAACCTGCTCCATGCATATGACAAGATGAGGCTGAAAGGCAGCGCCATCCAGCTCTCAGACCGAAACCTTTGCCAGCTGTGCCAGCATCCCTTCTCGGAGCCTGTCTTCATCCGGTACCCAAACGGGGGGCTTGTGCACACCCACTGTGCTGCCAGCAGACACAGCTCCCCCACCCCTGGCACCCGGACTTGA

Related Sequences

XP_004844539.1 Protein

Tgfbrap1 PREDICTED: transforming growth factor-beta receptor-associated protein 1 isoform X3 [Heterocephalus glaber]

Length: 857 aa      View alignments
>XP_004844539.1
MMSIKAFTLVSAVERELLMNDQERVNIECVECCGRNLYVGTSDCFIYHFLLEEKVLPSGTVAFTATKQLHRHLGFKKPVSELRAASALDRLLVLCDSCISLVSMHSLEPVPSGARIKGASTFALNENPVGGDPFCVEVCILSIKRRTIQVFLVYEDRVQIVKEVSTPEQPLAVAVDGHFLCLALSTQYIILNYNTGFSQDLFPYCSEEKRPIVKRIGRQEFLLAGPGGLGMFATVAGISQRAPVHWSENVIGAAVCFPYVIALDNEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVATSKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPREKFQVMYRRILQQAGFIQFAQLQFLEAKELFRSGHLDVRELISLHPFLLPTSSSFTRCHPPLHEYADLNQLTQGDQEKMAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDSAAWLEKHRKYFALGLLYHYNKQDAAAVQLWVNIVNGDIQDSTRSDLYEYVVDFLTYCSDQQLVWTYADWVLQKSEEVGVQVFTKRSVDEQQQNSFNPDNVITCLKKYPRALVKYLEHLVVDRSMQKEEYHTQLAMLYLEELLQQRVATSSSDAATTEMQTKLRHLLQKSDLYRVHFLIERIQGAGLPVERAILHGKLGEHEQALRILVHELGDTAAAEDYCLWSSEGQDAPCRQRLFHTLLTMYLQAGPLAPELTVAAVDLLNRHTSEFDATQVLQLLPGSWSVQLLRPFLTGAVRGSIHTRRTAQVALGLARSENLLHAYDKMRLKGSAIQLSDRNLCQLCQHPFSEPVFIRYPNGGLVHTHCAASRHSSPTPGTRT