Sequence details NCBI ID: XM_004844442.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Npas2
Gene Name neuronal PAS domain protein 2, transcript variant X2
Entrez Gene ID 101703217

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NPAS2 ENSCPOG00000002470 (Guinea pig)

Gene Details

neuronal PAS domain protein 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002250, Guinea pig)

Protein Percentage 90.51%
CDS Percentage 89.54%
Ka/Ks Ratio 0.13092 (Ka = 0.0494, Ks = 0.3774)

NPAS2 ENSG00000170485 (Human)

Gene Details

neuronal PAS domain protein 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000338283, Human)

Protein Percentage 86.84%
CDS Percentage 86.22%
Ka/Ks Ratio 0.15292 (Ka = 0.0731, Ks = 0.4779)

Npas2 ENSMUSG00000026077 (Mouse)

Gene Details

neuronal PAS domain protein 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000054719, Mouse)

Protein Percentage 84.35%
CDS Percentage 83.52%
Ka/Ks Ratio 0.14295 (Ka = 0.0882, Ks = 0.6172)

Npas2 ENSRNOG00000013408 (Rat)

Gene Details

neuronal PAS domain protein 2 (Npas2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000056327, Rat)

Protein Percentage 84.22%
CDS Percentage 83.56%
Ka/Ks Ratio 0.14341 (Ka = 0.0877, Ks = 0.6119)

Genome Location

Sequence Coding sequence

Length: 2481 bp    Location: 5637040..5789865   Strand: +
Raw sequence   
>XM_004844442.1
ATGAAGATGAGAAAGATAGAGCCAAGAGGTAAGGTACAAAAATGGAGTTCCTGTACTCAAGTGGGAAACAGAGCCTCGAGAAACAAGTCTGAGAAGAAGCGTCGGGACCAGTTCAATGTGCTCATCAAAGAGCTCAGCTCCATGCTGCCTGGGAACACACGAAAGATGGACAAGACCACCGTGCTGGAGAAGGTCATTGGCTTCCTGCAGAAACACAATGAAGTCTCAGCACAAACGGAAATCTGCGACATTCAGCAAGACTGGAAGCCTTCGTTCCTTAGTAATGAGGAATTCACCCAGTTGATGTTAGAGGCATTAGATGGCTTCATCATTGTGGTGACCACAGATGGCAGCATCCTGTATGTCTCAGACAGCATCACACCGCTCCTCGGCCACTTGCCGTCAGATGTCATGGATCAGAACTTATTAAATTTCCTCCCAGAACAAGAACATTCCGAAGTTTATAAAATGCTTTCTTCTCATATGCTTCTGACGGATTCCCCCTCCCCAGAATTCCTAAAATCTGACAACGATTTAGAGTTTTATTGCCATCTTCTCAGAGGCAGCTTGAACCCAAAGGAATTTCCAACTTATGAATACATAAAATTTGTAGGAAATTTTCGCTCTTACAACAATGTGCCTAGCCCCTCCTGTAACAGCTTTAACAACGCCCTTTCAAGACCTTGCCGGGTGCCACTAGGAGAGGAGGTCTGCTTCATCGCCACTGTCCGGCTGGCGACACCACAGTTCTTAAAGGAAATGTGCATCGTTGACGAACCTTTAGAGGAATTCACTTCAAGGCATAGCTTGGAATGGAAATTTTTATTTCTGGATCACAGAGCCCCTCCGATCATAGGATATCTGCCCTTCGAAGTGCTGGGCACCTCGGGCTACGACTACTACCACATCGATGACCTGGAGCTCCTGGCCAGGTGCCACCAGCACCTGATGCAGTTTGGCAAAGGGAAGTCATGTTGCTACCGGTTTCTAACCAAAGGGCAGCAGTGGATCTGGCTGCAGACTCACTACTACATCACCTACCACCAGTGGAACTCCAAGCCCGAATTCATCGTGTGCACCCACTCGGTCGTCAGTTATGCCGATGTCCGTGTGGAAAGGAGACAGGAGCTGGCTTTGGAAGACCCGCCCCCTGAGGTTTTGCACCCCTCAGTGCTGAAGGACAAGGGCTCCAGCCTGGACCCCCAGCAGCACTGTACCACACTGGACACTGGTGCCCCGGGCCTGAACGCCAGTCCTTCACCATCTGTGTCCTCAAGGAGTTCCCACAAGTCCACACACACGGCTATGTCGGAGCCTGCCTCCACTCCGACCAAGCTGATGGCCGAGGCCAGCACCACCTCTTTGCCAAGATTGGCCACCTTGCCCCAAGAGTTACCGGTGCCCGGGCTCAGCCAGGTGGCCACGATGCCAGCACCTCTGCCTTCCCCAGCATCCTGTGACCTCACGCAGCAGCTCCTGCCTCAGACCATTTTGCAGAGTCCGCCTGCCCCCATGGCACAGTTCTCCGCACAGCTCAGCATGTTCCAGACCATTAAGGACCAGCTGGAGCAGCGGACGCGGGTGCTGCAGGCCAACATCCGGTGGCAGCAGGAAGAGCTCCACAAGATCCAGGAGCAGCTGTGCCTGGTGCAGGACTCCAGCGTACAGATGTTCCTGCAACAGCCGGCCGTCTCCCTGAGCTTCAGCAGTGCCCAGCAGCCAGAGGCACAGCAGCAGCTGCCACAAAGGGTGGCTGCCGCAGCTCAGCCCCAGCTCATGACAAGCCCCCAGCTTCCAGGGCAAATGGCCTCGGCCCAGGTCACAAGCCAGCACCTGCTCAGAGAATCCACCGTGATTGCAAGCCAGGGTCTGAAGCCCATGAGAAGTCCCCAGGTGATGCAGGGGAGCAGCCGCTCAGCCAGCAGCCTGCCGCCCCCCTTTGGCAGCACTGCAGCACTGCTGCCCCCGGCTCTGAGCCTGGCTGCCCCCGTGCCCACCTCCCAGGATGCCAGCCAGTGCCAGCCAGGCCCTGACTTCAGCCATGACCAGCAGCTCAGGCTGCTGCTGAGCCAGCCCATCCAGCCCATGATGCCTGGGTCCTGTGACTCAAGGGCACCCGCAGAGGCCAGCAGGACGGGACAGCATGTCAAGTTCGCACCGAGCCAGGCCGAGTTTCCAAGTCCAGACTCACACCCGGCCAGCAGCAGCGCTGTGACCCCTGTCCTGCTGATGGGGCAGACGGTGCTGCACCCCAGCTTCCCCGCCTCCCAGCCGGCCCAGCAGTTGCAGCTGAACTACCTGCAGGCACCAACCTCTCTGCACAGTGAGCAGCCGGACTCACTGCTCCTCTCCACCTACTCCCAACAGCCAGGAACCCTTGGCTATGCCCCGCCGTCTTCTGCACAGCCCCAGCCCACGCGCCCATCCCGCAGGGTCAGCCGTCTGTCAGAGTCGTCAGGCCTCCAGCAGCCACCTGGGTAG

Related Sequences

XP_004844499.1 Protein

Npas2 PREDICTED: neuronal PAS domain-containing protein 2 isoform X2 [Heterocephalus glaber]

Length: 826 aa      View alignments
>XP_004844499.1
MKMRKIEPRGKVQKWSSCTQVGNRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHNEVSAQTEICDIQQDWKPSFLSNEEFTQLMLEALDGFIIVVTTDGSILYVSDSITPLLGHLPSDVMDQNLLNFLPEQEHSEVYKMLSSHMLLTDSPSPEFLKSDNDLEFYCHLLRGSLNPKEFPTYEYIKFVGNFRSYNNVPSPSCNSFNNALSRPCRVPLGEEVCFIATVRLATPQFLKEMCIVDEPLEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVERRQELALEDPPPEVLHPSVLKDKGSSLDPQQHCTTLDTGAPGLNASPSPSVSSRSSHKSTHTAMSEPASTPTKLMAEASTTSLPRLATLPQELPVPGLSQVATMPAPLPSPASCDLTQQLLPQTILQSPPAPMAQFSAQLSMFQTIKDQLEQRTRVLQANIRWQQEELHKIQEQLCLVQDSSVQMFLQQPAVSLSFSSAQQPEAQQQLPQRVAAAAQPQLMTSPQLPGQMASAQVTSQHLLRESTVIASQGLKPMRSPQVMQGSSRSASSLPPPFGSTAALLPPALSLAAPVPTSQDASQCQPGPDFSHDQQLRLLLSQPIQPMMPGSCDSRAPAEASRTGQHVKFAPSQAEFPSPDSHPASSSAVTPVLLMGQTVLHPSFPASQPAQQLQLNYLQAPTSLHSEQPDSLLLSTYSQQPGTLGYAPPSSAQPQPTRPSRRVSRLSESSGLQQPPG