Details from NCBI annotation

Gene Symbol Arid5a
Gene Name AT rich interactive domain 5A (MRF1-like), transcript variant X2
Entrez Gene ID 101706713

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARID5A ENSCPOG00000026444 (Guinea pig)

Gene Details

AT rich interactive domain 5A (MRF1-like)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016019, Guinea pig)

Protein Percentage 85.3%
CDS Percentage 87.12%
Ka/Ks Ratio 0.18937 (Ka = 0.0775, Ks = 0.4093)

ARID5A ENSG00000196843 (Human)

Gene Details

AT rich interactive domain 5A (MRF1-like)

External Links

Gene Match (Ensembl Protein ID: ENSP00000350078, Human)

Protein Percentage 77.09%
CDS Percentage 81.65%
Ka/Ks Ratio 0.20648 (Ka = 0.1313, Ks = 0.6361)

Arid5a ENSMUSG00000037447 (Mouse)

Gene Details

AT rich interactive domain 5A (MRF1-like)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000110684, Mouse)

Protein Percentage 74.62%
CDS Percentage 79.39%
Ka/Ks Ratio 0.24187 (Ka = 0.1548, Ks = 0.6398)

Arid5a ENSRNOG00000015382 (Rat)

Gene Details

AT rich interactive domain 5A (Mrf1 like) (Arid5a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060873, Rat)

Protein Percentage 71.33%
CDS Percentage 76.77%
Ka/Ks Ratio 0.24433 (Ka = 0.1816, Ks = 0.7434)

Genome Location

Sequence Coding sequence

Length: 1764 bp    Location: 2491170..2502719   Strand: +
>XM_004844365.1
ATGGCACCCCCTGTCAGAGGAAAAAGGAAGCAGTCAGAGGAGGGTGACCCTGTAGATGCCCCTGTGTCCCCTAATCCTGATGGTGAGCAGAGCAGGAGTCAGAGCCCGATCCAGCTGGAGGACTCCCCCGAGGCAGGCGGGGAGCGGGAGGAGGAGCAGGCCTTCCTGGTCAGCCTCTACAAGTTCATGAAGGAGCGGCACACACCCATCGAAAGGGTGCCCCATCTTGGCTTCAAGCAGATTAACCTGTGGAAGATCTACAAGGCCGTAGAGAAGCTGGGGGCCTATGAGCTGGTGACCGGCCGCCGCCTCTGGAAGAATGTCTATGACGAGCTGGGGGGCAGCCCAGGCAGCACGAGCGCGGCTACGTGCACACGCCGCCACTATGAGAGGCTGGTCCTCCCATATGTGCGGCACCTGAAGGGGGAAGATGACAAGCCACTGCCCCCCTCCAAGCCCAGGAAGCAGTACAAGATGGCCAAGGAGCCAAGGGGGGATGACGGGGCCACTGAGCAGGTGAAGAAAACCAAAGAGGAGAGGCAGGTGGACCAGGTGACACCAGGAAAGAACAAAACGGATGCCACTGAACTGGCTCCACTTCCCAGCGAGGCGCCCCCTAGGCGTAGCATGGAGCAGCCAAGCCCAGCTCCTGGGTCCTCCTTGCCCTTCATAGGTGCTGGTGTCTGCCCTGAGGCCTACAAGCGGCTCCTGTCCACCTTCTACTGCAAAGAGACTCATGGTGTCATGTCACCTCTGGCTAAGAAAAAGCTCCTAGCCCAGGTCAGCAAGGCAGAGGCCTTGCAGTGCCAGGAGGAGGGCTGTCACCATGGGGCAGATGACCCTGACAGGAAGCTCCTAGAGAGTTCCTGGAGCCCGAGAGGGCTGGCTGAGAACTCAGGGTGCCAGCGGGCCCCACTGGAGGGGTTGCAGGCCCCAGGAAACAGCCTGGGGGCAGAGACTCCAGGAGTCCCCTGCTCTACGGCTCCCATCTTCATGGGCTCTTTCCACACCTACCCCACTGAGGTGCTGAAACCTATCAGCCAGCACCCCCGGGACTTCTTCTCCAGCCTAAAAGACAGGCTGCTGCTGGGATCCCCTGGCAAAGGAGAGGGGCTTTCAGCCAAAAAGGCCCAACTGGTGTGGGGCGGGGACGCCAGCCGCCCTTCTGCATTCCACAAAGGCACCTCCAGAAAGAGTAGCTTCTACCCCAAGCCCAAAGCCTGCTGGGTGCCCCCCATGGCCAGAGTCCCTGCTGAGAGCCCTGTGCCCCTGCCTGCTGTCCCTAGAAGCCCAGGCCTTGGCAACAAGCGCAGCATGGATGAGGAGGGCTTTGCCCATGGTGGCAGGAAACTGCGAGCAGTGTCTCCTTTCCTGAAGGAGATGGATGCCAAAGAGTGCAGGCCGAAGCCCTTGGTGCCCGACATGGCTGTCTCCTGCCTGCTGGGCCCAGCCCTGGGGCCTGCCCCACCAGAGGCTTACCGGGGCACCATGCTGCGCTGCCCGCTCAGTTTTGCTGGCACCCCAGACCCACTAAAGGGCCAGGCCACACTACCCTTCAGTCCCCTGGTCATTCCGGCCTTCCCAGCCCACTTCCTGGCCACTACTAGCCACTCACCCATGACCACCAGCCTGGTGCACTTCCCCCCAGCATCTTTTGACAGTGCCCTTCGCCATAGACTGGGCCCAGGGTCGCCTGCCTGGCATGTGCCACCTGTCACAACCTATGCAGCGCCACCCTTCTTCCACTTAAACACCAGGCTGTAG

Related Sequences

XP_004844422.1 Protein

Arid5a PREDICTED: AT-rich interactive domain-containing protein 5A isoform X2 [Heterocephalus glaber]

Length: 587 aa      View alignments
>XP_004844422.1
MAPPVRGKRKQSEEGDPVDAPVSPNPDGEQSRSQSPIQLEDSPEAGGEREEEQAFLVSLYKFMKERHTPIERVPHLGFKQINLWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERLVLPYVRHLKGEDDKPLPPSKPRKQYKMAKEPRGDDGATEQVKKTKEERQVDQVTPGKNKTDATELAPLPSEAPPRRSMEQPSPAPGSSLPFIGAGVCPEAYKRLLSTFYCKETHGVMSPLAKKKLLAQVSKAEALQCQEEGCHHGADDPDRKLLESSWSPRGLAENSGCQRAPLEGLQAPGNSLGAETPGVPCSTAPIFMGSFHTYPTEVLKPISQHPRDFFSSLKDRLLLGSPGKGEGLSAKKAQLVWGGDASRPSAFHKGTSRKSSFYPKPKACWVPPMARVPAESPVPLPAVPRSPGLGNKRSMDEEGFAHGGRKLRAVSPFLKEMDAKECRPKPLVPDMAVSCLLGPALGPAPPEAYRGTMLRCPLSFAGTPDPLKGQATLPFSPLVIPAFPAHFLATTSHSPMTTSLVHFPPASFDSALRHRLGPGSPAWHVPPVTTYAAPPFFHLNTRL