Sequence detailsNCBI ID: XM_004844344.1 (Coding sequence)  Best Hit

Details from NCBI annotation

Gene Symbol Kcnip3
Gene Name Kv channel interacting protein 3, calsenilin, transcript variant X1
Entrez Gene ID 101699907

Database interlinks

Part of NW_004624749.1 (SequenceType object (1))

For more information consult the page for NW_004624749.1 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

KCNIP3ENSCPOG00000015053 (Guinea pig)

Gene Details

Kv channel interacting protein 3, calsenilin

External Links

Gene Match(Ensembl Protein ID:ENSCPOP00000013569, Guinea pig)

Protein Percentage 93.75%
CDS Percentage 92.58%
Ka/Ks Ratio 0.08765 (Ka = 0.031, Ks = 0.3537)

KCNIP3ENSG00000115041 (Human)

Gene Details

Kv channel interacting protein 3, calsenilin

External Links

Gene Match(Ensembl Protein ID:ENSP00000295225, Human)

Protein Percentage 92.58%
CDS Percentage 89.84%
Ka/Ks Ratio 0.0536 (Ka = 0.0339, Ks = 0.6319)

Kcnip3ENSMUSG00000079056 (Mouse)

Gene Details

Kv channel interacting protein 3, calsenilin

External Links

Gene Match(Ensembl Protein ID:ENSMUSP00000099504, Mouse)

Protein Percentage 92.58%
CDS Percentage 89.58%
Ka/Ks Ratio 0.06604 (Ka = 0.0353, Ks = 0.5349)

Kcnip3ENSRNOG00000014152 (Rat)

Gene Details

Kv channel interacting protein 3, calsenilin (Kcnip3), mRNA

External Links

Gene Match(Ensembl Protein ID:ENSRNOP00000047927, Rat)

Protein Percentage 93.36%
CDS Percentage 89.45%
Ka/Ks Ratio 0.04669 (Ka = 0.0294, Ks = 0.6287)

Genome Location

Sequence SequenceType object (2)

Length: 858 bp    Location: 2055512..2128898   Strand: +
Raw sequence   
>XM_004844344.1
ATGAGGCAGCTGCCAGCGGGGCCAGGCAGTCCCGTCTGCTCGGGCTGCGAAGTGGGGACAGTGGCCACAGTTCTGAGCTGCACCAGGATGCAGCGGCCAAAGGAGGTGACAAAGGCAGCAGATGGCAGCCTCCTGGGAGACCCTGGGCACACACCGCTGAACAGGAAGGAGGGCACCAAGTGGCAGAGGCAGAGATTCACCCGCCAGGCCCTGATGCGGTGCTGCTTGGTCAAGTGGATCCTGTCCAGTGCTGCCCCACAGGGCTCAGACAGCAGTGACAGTGAGCTGGAGCTGTCCACGGTGCGCCACCAGCCAGAGGGGCTAGACCAGCTGCAGACACAGACCAAGTTTACCAAGAAGGAGCTGCAGTCCCTCTACCGGGGCTTCAAGAATGAGTGTCCTACAGGCCTGGTGGATGAAGACACCTTCAAACTCATCTACTCGCAGTTCTTCCCTCAGGGAGATGCCACCACCTATGCACACTTCCTCTTCAATGCCTTCGACGCCGATGGGAATGGGGCTATCCACTTCGAGGACTTTGTGGTCGGGCTGTCCATCCTGCTGCGAGGAACAGTCCATGAGAAGCTCAAATGGGCTTTCAATCTCTACGACATTAACAAGGACGGCTACATCACCAAAGAGGAGATGCTGGCCATCATGAAATCCATCTACGACATGATGGGCCACCACACCTACCCCATTCTTCGGGAGGACGAGCCCCTGGAGCATGTGGAGAGGTTCTTCCAGAAAATGGACCGGAACCAGGATGGGGTGGTGACCATTGAGGAGTTCCTGGAGACCTGTCAGAAGGATGAGAACATCATGAACTCCATGCAACTGTTTGAGAACGTCATCTAG

Related Sequences

XP_004844401.1 SequenceType object (4)

Kcnip3 PREDICTED: calsenilin isoform X1 [Heterocephalus glaber]

Length: 285 aa      View alignments
>XP_004844401.1
MRQLPAGPGSPVCSGCEVGTVATVLSCTRMQRPKEVTKAADGSLLGDPGHTPLNRKEGTKWQRQRFTRQALMRCCLVKWILSSAAPQGSDSSDSELELSTVRHQPEGLDQLQTQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGYITKEEMLAIMKSIYDMMGHHTYPILREDEPLEHVERFFQKMDRNQDGVVTIEEFLETCQKDENIMNSMQLFENVI