Sequence details NCBI ID: XM_004844331.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Nphp1
Gene Name nephronophthisis 1 (juvenile), transcript variant X1
Entrez Gene ID 101725630

Database interlinks

Part of NW_004624749.1 (Scaffold)

For more information consult the page for NW_004624749.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 2085 bp    Location: 1725518..1779462   Strand: +
Raw sequence   
>XM_004844331.1
ATGCTAGCCAGGCGGCCTCGCGATCCCCTGCAGGTGGTGCGGCGCCGCAGCCAGGAGCTGAAGCTACAGGTTGATAGTTTGTTTTCTGAAAGCCAATTGAAAGGAGCTCTAGAACCCAATAAAAGGCAAGATATTTACCAAAGATGTATTCAGTTAAAACAGGCAATAGATGAAAATAAAAGCACTCTTCAGAAATTAAAGAAGGCTGATGAAGCTGCACCTGTCGGGAACTACGATCAGAGGAAAGAAGAGGAGCAGGCCCTCCTGGACAAGCTTACCCACCAACTGCAAGAACTCACTGTGGACATAAGTAAAGAAAATATGACTAAGACAGGTGCACCTACTGAAAAAGAGGAAGATAGTGATTCTACTAAAGAACAAGATGATGATGGCGATGACGATGACGACGACGACGAAGAAGAAGAAAACAGTGAAGAAAGTGCTGGAGAGGAAGAAGAATCTGAAGAGGAGGAAGAGCAACAGGAAGATGAATCTCTCAAACAAGCAGCAAATAAAGAATACATTGCTCTTGGAGATTTTACTGCTCAGGAAGCTGGGGATCTTACATTTAAGAAAGGGGAAATTCTCCTTATAATTGAAAAAAAGCCTGATGGTTGGTGGATAGCTAAGAATGCCAAAGGAAATGAAGGTCTTATTCCCAAAACCTACGTGGAGCCCTATAATAAAGAAAAAGAAGACCAAGAATCAAGTGAAGAAGACAGTGAAGAAGATGTGGATGTGGGAGATGAAGCAGCAGACAGAAGTGAAGTGAAGCAAAGAACTGATTCCCGTTGGAATGCTGTTCGAAAAGCTATCTCAGAGCAGATAAACACTGTCGACGTGCTGACCACAATGGGGGCCATTCCTGCGGGCTTCCGGCCCTCCACGCTCTCCCAGCTGCTGGAGGAAGGGAATCAATTTCGAGCAAGTTACTTCCTACAGCCAGAGCTCACGGCATCGCAGCTGGCCTTCCGAGACCTAGTGTGGGATGCCAAGTCGAGCACTATCAGGTCAAGACCCAGCCATGTTTCATTGGTCCTGACCCTGTGGAGCTGTAAGATGATTCCTCTCCCCGGAACGAGCATTCAGGTCCTCAGCAGGCACGTGCGCCTCTGTGTGTTCGACGGTAACAGGGTCCTGAGCAACATTCATACAGTCCGAGCCACGTGGCAACCTAAAAAGCCCAAAACATGGGCTTTTTCTCCCCAGGTTACTGGCATCTTGCCCTGCTTGCTCGATGGTGATTGTTTCATCAGGTCCAATTCTTCATCTCCAGACCTCAGAATATTGTTTGAACTTGGAATTTCTTATATTCGTAATTCAACTGGTGAACGAGGAGAGTTAAGTTGTGGCTGGGCATTTCTGAAGCTGTTCGATGCCAGCGGTGTTCCTATTCCAGCCAAAACTTACGAGCTCTTGTTGAACGGTGGGACTCCCTACGAGAAAGGCGTGGAAGTGGACCCTTCTGTGTCCAGGAGAGCACACAGCAGTGTTTTCCATCAGATGCTGACCATGAGAAGGCAGCCTCAACTTCTGATAAAACTGAGGTCTCTGAACCAAAGAACAAGAAACATGCTAAGTCTCCTGCCAGAAACATTGATTGGAAGTATGAGCTGTTCTCACTTGTTGGTATTTTATCGTCAAATTCTTGGAGATGTGCTGCTGAAAGACAGGATGAACTCACAAAGTACTGATCTAATCAGTCACCCGATGCTAGCCTCCTTCCCCAAGCTCTTCGAGCAGCCCGAGGTGATGGATGCTCTGCGGAGTTCGTGGGCTGAGAAAGAAAGCACACTGAAAAGATCAGAGAAGAGAGACAGGGAGCTCCTGAAGGCCAGCTTCCTCCTGGTCTACCATGACTGCGTGCTCCCGCTGCTGCACTCCACTCTCCTGCCCCCCTTCAAGTGGGCCGAAGAGGAGACCGAGGCTGCACGGTGGAAAATCATCGCTGACTTCCTCAAGCAAACCCATGAGAATGAGGGTGCCCTTCAGGCTCTGCTGTCGCAGGATGGGGTCCACAAGCCTTTCGACCTCTTGGAGCAGGCCTACGACTTCCTGGATGTGGGAAGGAAGAGGGCCAGCTAA

Related Sequences

XP_004844388.1 Protein

Nphp1 PREDICTED: nephrocystin-1 isoform X1 [Heterocephalus glaber]

Length: 694 aa      
>XP_004844388.1
MLARRPRDPLQVVRRRSQELKLQVDSLFSESQLKGALEPNKRQDIYQRCIQLKQAIDENKSTLQKLKKADEAAPVGNYDQRKEEEQALLDKLTHQLQELTVDISKENMTKTGAPTEKEEDSDSTKEQDDDGDDDDDDDEEEENSEESAGEEEESEEEEEQQEDESLKQAANKEYIALGDFTAQEAGDLTFKKGEILLIIEKKPDGWWIAKNAKGNEGLIPKTYVEPYNKEKEDQESSEEDSEEDVDVGDEAADRSEVKQRTDSRWNAVRKAISEQINTVDVLTTMGAIPAGFRPSTLSQLLEEGNQFRASYFLQPELTASQLAFRDLVWDAKSSTIRSRPSHVSLVLTLWSCKMIPLPGTSIQVLSRHVRLCVFDGNRVLSNIHTVRATWQPKKPKTWAFSPQVTGILPCLLDGDCFIRSNSSSPDLRILFELGISYIRNSTGERGELSCGWAFLKLFDASGVPIPAKTYELLLNGGTPYEKGVEVDPSVSRRAHSSVFHQMLTMRRQPQLLIKLRSLNQRTRNMLSLLPETLIGSMSCSHLLVFYRQILGDVLLKDRMNSQSTDLISHPMLASFPKLFEQPEVMDALRSSWAEKESTLKRSEKRDRELLKASFLLVYHDCVLPLLHSTLLPPFKWAEEETEAARWKIIADFLKQTHENEGALQALLSQDGVHKPFDLLEQAYDFLDVGRKRAS