Details from NCBI annotation

Gene Symbol Pcdh9
Gene Name protocadherin 9, transcript variant X2
Entrez Gene ID 101716923

Database interlinks

Part of NW_004624748.1 (Scaffold)

For more information consult the page for NW_004624748.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 3612 bp    Location: 28543276..27605723   Strand: -
>XM_004844284.1
ATGGACCTGAGGGATTTTTACCTGTTGGCTGCTCTGATTGCCTGTTTAAGGCTGGATTCTGCAGTAGCCCAAGAACTTATTTACACTATTAGAGAGGAATTGCCTGAAAATGTGCCCATAGGAAACATACCAAAGGATCTGAACATTTCTCACATCAATGCTGCCACAGGAACTAGTGCCAGCCTTGTCTACAGACTGGTTTCTAAAGCTGGGGATGCCCCTTTGGTAAAAGTATCCAGCAGCACTGGAGAAATTTTCACAACTTCCAATAGAATAGACAGAGAAAAACTCTGTGCCGGAGCTTCTTATGCTGAGGAGAATGAATGTTTCTTTGAACTTGAGGTGGTGATCCTCCCCAATGACTTTTTCAGGCTGATCAAAATAAAGATAATTGTCAAGGATACCAATGATAATGCCCCCATGTTTCCATCTCCTGTCATCAATATTTCCATTCCAGAAAACACTTTGATCAACAGCCGCTTTCCAATTCCATCAGCAACAGATCCTGACACAGGCTTCAATGGTGTACAGCATTATGAATTGTTAAATGGGCAGAGTGTTTTTGGACTGGATATCGTGGAAACTCCAGAGGGAGAGAAGTGGCCGCAATTGATTGTTCAGCAAAACTTGGATAGAGAACAGAAAGATACCTATGTGATGAAAATCAAAGTGGAGGATGGAGGCACTCCACAGAAATCCAGCACAGCCATACTGCAGGTCACAGTAAGTGATGTAAATGACAACAGGCCAGTGTTTAAAGAGGGTCAAGTGGAGGTGCATATTCCAGAGAATGCTCCTGTGGGTACCTCTGTAATCCAGCTCCATGCCACTGATGCAGATATAGGCAGTAATGCTGAAATCCGGTACATTTTTGGTGCCCAGGTTGCCCCTGCAACCAAAAGACTCTTTGCTTTAAATAATACTACTGGGCTGATTACAGTTCAGAGGTCCTTAGATAGAGAAGAGACAGCCATTCACAAAGTGACAGTGCTGGCCAGTGATGGCAGCTCCACTCCTGCTCGAGCAACGGTTACCATCAATGTCACTGATGTAAATGATAACCCTCCAAACATAGACCTCAGGTACATTATAAGTCCCATCAATGGCACAGTGTATTTATCTGAGAAAGATCCTGTCAATACGAAGATTGCCCTAATTACAGTTTCAGATAAGGACACAGATGTGAATGGCAAAGTGATCTGTTTCATTGAAAGAGAGGTCCCATTTCATTTGAAGGCAGTGTATGACAACCAGTATTTGTTAGAGACCTCTTCTTTGTTGGACTATGAGGGCACCAAAGAATTCAGCTTTAAAATTGTTGCCTCTGATTCTGGAAAGCCCAGTTTAAATCAGACTGCCCTGGTAAGGGTTAAGCTTGAGGATGAAAATGACAACCCACCAATTTTCAACCAGCCTGTAATTGAGCTGTCAGTTTCTGAAAACAACCGACGTGGGTTATACTTAACAACTATTAGTGCCACAGATGAAGACAGTGGGAAAAATGCAGACATTGTTTACCAGCTTGGACCCAATGCCTCCTTCTTTGATCTGGACCGAAAGACAGGAATTTTGACAGCTTCCAGAGTCTTTGACAGAGAAGAACAAGAGCGATTCATTTTTACAGTAACTGCCAGGGACAATGGGACCCCTCCCCTCCAAAGCCAAGCGGCTGTGATAGTTACTGTTCTGGATGAGAACGACAATAGCCCCAAGTTTACTCATAATCATTTTCAATTTTTTGTGTCTGAGAATCTGCCAAAGTATAGTACTGTGGGGGTAATCACAGTGACAGATGCAGATGCTGGAGAAAATAAAGCTGTGACTCTTTCCATTCTAAACGACAATGATAATTTTGTGTTGGATCCCTATTCTGGAGTCATAAAGTCGAATGTCTCATTTGATAGAGAGCAGCAGAGTTCCTACACTTTTGATGTCAAAGCCACTGATGGAGGACAACCGCCTCGTTCCTCTACTGCAAAAGTAACTATCAATGTCATGGATGTCAATGACAATAGCCCAGTTGTCATTTCTCCACCATCTAATACTTCATTTAAATTGGTGCCCCTCTCAGCCATCCCTGGGTCCGTGGTAGCAGAAGTGTTTGCAGTGGATATCGACACTGGGATGAACGCAGAACTTAAGTATACCATAGTGAGTGGAAACAACAAAGGCTTATTTCGGATTGATCCAGTCACAGGTAATATCACACTGGAAGAAAAGCCAGCACTCACTGATGTGGGACTGCACCGTTTGGTGGTCAACATAAGTGACCTGGGGTACCCTAAGGCTTTGCACACACTCGTGCTTGTGTTTCTATATGTGAATGACACTGCTGGAAATGCCTCCTTTATCTATGACTTGATCCGCAGGACTATGGAGACCCCTTTGGACAGGAACATAGGGGATAGCAGCCAGCCCTATCAAAACGAGGACTATCTCACCATCATGATTGCCATTGTCGCTGGGGCCATGGTGGTCATAGTTGTGATCTTCGTCACAGTTCTGGTGCGTTGTCGACACGCGTCAAGGTTCAAAGCTGCTCAAAGGAGCAAGCAAGGTGCCGAATGGATGTCCCCAAACCAGGAGAACAAACAAAACAAGAAAAAGAAAAGGAAGAAAAGAAAGTCTCCCAAGAGCTCTCTTTTGAACTTTGTTACTATTGAAGAGTCCAAACCGGATGATGCAGTTCATGAACCTATCAATGGGACAATAAGCCTGCCAGCTGAGCTGGAGGAGCAAAGTATAGGAAGATTTGACTGGGGCCCAGCACCTCCAACAACCTTCAAGCCTAACAGCCCTGACTTGGCCAAGCACTACAAATCTGCCTCTCCACAGCCTGCTTTTCATCTCAAACCAGACACTCCAGTTTCTGTGAAAAAGCACCACGTGATTCAGGAGCTCCCTTTGGACAACACCTTTGTCGGGGGTTGTGACACCCTTTCCAAACGCTCTTCCACTAGTTCAGATCACTTCAGTGCCTCAGAGTGCAGCTCCCAAGGAGGTTTCAAGACAAAGGGCCCCTTACACACCAGACAGTCGCAGCGCCGTGTTACGTTTCACCTCCCCGACGGCTCCCAGGAAAGCTGCAGTGACAGTGGTCTGGGGGACCACGAGCCGGTGGGTAGTGGAACCCTGATCTCACACCCTCTTCCTCTGGTTCAGCCACAGGACGAATTCTATGACCAGGCCTCTCCAGACAAGAGGACCGAAGCAGACGGCAACTCTGACCCCAACTCCGATGGGCCTCTGGGTCCCCGAGGATTAGCAGAAGCTACAGAGATGTGCACTCAGGAGTGCTTGGTTTTGGGTCACTCTGATAATTGCTGGATGCCTCCTGGCTTGGGTCCATACCAACACCCGAAGTCTCCTCTCTCAACCTTTGCAACCCAGAAAGAATGGGTCAAGAAAGACAAGCTTGTGAATGGGCACACCCTCACCAGAGCCTGGAAAGAAGACAGCAACAGGAATCAATTCAATGACCGTAAGCAGTATGGCTCCAGTGAAGGCCATTTCAACAATGGCAGCCACATTGCAGACATTCCTCTGGCAAATCTGAAGTCCTATAAGCAAGCAGGAGGTGCTATTGAGAGTCCTAAGGAGCACCAACTCTAA

Related Sequences

XP_004844341.1 Protein

Pcdh9 PREDICTED: protocadherin-9-like isoform X2 [Heterocephalus glaber]

Length: 1203 aa     
>XP_004844341.1
MDLRDFYLLAALIACLRLDSAVAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSASLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPNDFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYELLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDLRYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYLLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGILTASRVFDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDADAGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAKVTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPALTDVGLHRLVVNISDLGYPKALHTLVLVFLYVNDTAGNASFIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRHASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPINGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKKHHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPGLGPYQHPKSPLSTFATQKEWVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGSSEGHFNNGSHIADIPLANLKSYKQAGGAIESPKEHQL