Sequence details NCBI ID: XM_004844249.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tnfsf11
Gene Name tumor necrosis factor (ligand) superfamily, member 11
Entrez Gene ID 101696350

Database interlinks

Part of NW_004624748.1 (Scaffold)

For more information consult the page for NW_004624748.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TNFSF11 ENSCPOG00000004659 (Guinea pig)

Gene Details

tumor necrosis factor (ligand) superfamily, member 11

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004195, Guinea pig)

Protein Percentage 91.4%
CDS Percentage 92.36%
Ka/Ks Ratio 0.20262 (Ka = 0.0422, Ks = 0.2082)

TNFSF11 ENSG00000120659 (Human)

Gene Details

tumor necrosis factor (ligand) superfamily, member 11

External Links

Gene Match (Ensembl Protein ID: ENSP00000239849, Human)

Protein Percentage 91.48%
CDS Percentage 89.48%
Ka/Ks Ratio 0.10467 (Ka = 0.04, Ks = 0.3823)

Tnfsf11 ENSMUSG00000022015 (Mouse)

Gene Details

tumor necrosis factor (ligand) superfamily, member 11

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022592, Mouse)

Protein Percentage 84.76%
CDS Percentage 84.44%
Ka/Ks Ratio 0.15958 (Ka = 0.084, Ks = 0.5265)

Genome Location

Sequence Coding sequence

Length: 957 bp    Location: 12555405..12527478   Strand: -
Raw sequence   
>XM_004844249.1
ATGCGCCGCTCCAGCCGCGACTACACCAAGTACCTGCGCGGCTCGGAGGAGATGGGCAGCGGGGGCCCCGGAGCCCCGCACGAGGGTCCCCTGCACGTCCCGCCGCCCGCCGAGCCGCCCCCGCCGCCCGCGGCCTCCCGCTCCATGTTCGTGGCCCTCCTGGGGCTGGGGCTGGGCCAGGTCGTCTGCAGCGTGGCTCTGTTCCTGTACTTCCGAGCGCAGATGGATCCTAATAGAATATCAGAAGATAGCACTCACTGCATTTATAGAATTTTGAGACTCCATGAAAATGCAGATTTGCAAGACACAAATCTGGAGAGTGAGGACATGAAATTAATACCTGACTCCTGTAGGAGAATTAAACAGGCCTTTCAAGGAGCTGTGCAAAAGGAATTACAACATATTGTTGGGTCACAACACCTCAGAGCAGAGAAAGCTACGTTGGAAGGTTCATGGTTTGATCTGGCCAAGAGAGGCAAGCTGGAAACTCAGCCTTTTGCTCACCTCACTATTAATGCCACCAACATGCCATCAGGTTCCCACAAAGTGAGTCTCTCTTCTTGGTACCATGACCGGGGTTGGGCCAAGATATCCAATATGACTTTGAGAAATGGAAAACTAATGGTTAACCAAGATGGCTTTTATTACCTTTATGCCAACATTTGCTTTCGACATCATGAAACATCAGGAGGCTTAGCTACGAAATATCTTCAGCTGATGGTGTATGTCACAAAAACCAGCATCAAAATTCCAAGTTCTCATACTCTGATGAAAGGAGGAAGCACCAAATACTGGCTGGGGAATTCTGAATTTCATTTTTATTCCATAAATGTTGGAGGATTTTTTAAACTACGATCTGGTGAAGAAATAAGCATTGAGGTATCCAATCCTTCCCTGCTTGATCCAGATCAAGATGCAACGTACTTTGGGGCTTTTAAAGTTCGTGATATAGATTGA

Related Sequences

XP_004844306.1 Protein

Tnfsf11 PREDICTED: tumor necrosis factor ligand superfamily member 11 [Heterocephalus glaber]

Length: 318 aa      
>XP_004844306.1
MRRSSRDYTKYLRGSEEMGSGGPGAPHEGPLHVPPPAEPPPPPAASRSMFVALLGLGLGQVVCSVALFLYFRAQMDPNRISEDSTHCIYRILRLHENADLQDTNLESEDMKLIPDSCRRIKQAFQGAVQKELQHIVGSQHLRAEKATLEGSWFDLAKRGKLETQPFAHLTINATNMPSGSHKVSLSSWYHDRGWAKISNMTLRNGKLMVNQDGFYYLYANICFRHHETSGGLATKYLQLMVYVTKTSIKIPSSHTLMKGGSTKYWLGNSEFHFYSINVGGFFKLRSGEEISIEVSNPSLLDPDQDATYFGAFKVRDID