Sequence details NCBI ID: XM_004844205.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Zc3h13
Gene Name zinc finger CCCH-type containing 13
Entrez Gene ID 101711998

Database interlinks

Part of NW_004624748.1 (Scaffold)

For more information consult the page for NW_004624748.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ZC3H13 ENSCPOG00000000646 (Guinea pig)

Gene Details

zinc finger CCCH-type containing 13

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000570, Guinea pig)

Protein Percentage 95.03%
CDS Percentage 93.6%
Ka/Ks Ratio 0.11372 (Ka = 0.0247, Ks = 0.2171)

ZC3H13 ENSG00000123200 (Human)

Gene Details

zinc finger CCCH-type containing 13

External Links

Gene Match (Ensembl Protein ID: ENSP00000282007, Human)

Protein Percentage 91.6%
CDS Percentage 89.61%
Ka/Ks Ratio 0.10084 (Ka = 0.0413, Ks = 0.4093)

Zc3h13 ENSMUSG00000022000 (Mouse)

Gene Details

zinc finger CCCH type containing 13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022577, Mouse)

Protein Percentage 86.65%
CDS Percentage 83.75%
Ka/Ks Ratio 0.09837 (Ka = 0.0719, Ks = 0.7311)

Zc3h13 ENSRNOG00000011237 (Rat)

Gene Details

zinc finger CCCH type containing 13 (Zc3h13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015467, Rat)

Protein Percentage 87.55%
CDS Percentage 83.84%
Ka/Ks Ratio 0.0841 (Ka = 0.0648, Ks = 0.7701)

Genome Location

Sequence Coding sequence

Length: 4968 bp    Location: 8928077..9012364   Strand: +
Raw sequence   
>XM_004844205.1
ATGTCAAAAATTAGGAGAAAAGTCACAGTGGAAAACACCAAGACTATATCTGATAGCACATCGCGAAGACCCAGTGTGTTTGAGAGGCTTGGACCCAGCACTGGCAGTACAACAGAGACACAGTGCCGTAACTGGCTGAAGACTGGCAACTGCCTCTATGGAAACACATGCAGATTCGTACATGGCCCTTCACCTCGTGGGAAAGGTTACAGCAGCAGTTATAGAAGGTCACCTGAAAGACCTACAGGGGATCTCAGAGAAAGAATGAAGAACAAACGCCAAGATGTGGATGGTGAGCCCCAGAAACGAAATACAGAGGAATCATCCTCGCCTGTTAGGAAAGAATCTTCAAGAGGGAGACACAGGGAGAAGGAAGATATAAAAATCACTAAGGAGAGAACTCCAGAAAGTGAAGAAGAAAATGTAGAATGGGAAACTAATAGAGATGATTCTGACAATGGAGATATTAATTATGATTATGTTCATGAATTGTCATTGGAAATGAAGCGTCAGAAGATACAGAGAGAATTAATGAAGTTGGAACAAGAAAATTTGGAGAAGAGAGAAGAAATTATCATTAAAAAGGAGGTCTCGCCAGAAGTGATTAGATCAAAATTGTCTCCATCACCTTCTCTAAGAAAGTCTAGCAAATCTCCAAAGCGAAAATCAAGCCCCAAGTCCTCTTCAGCTAGCAAGAAAGATAGGAAGACATCTGCAGTGTCTTCGCCCCTGTTGGACCAGCAGAGGAATTCAAAAAGCAACCAGAGTAAAAAGAAAGGGCCACGTACTCCTAGTCCACCCCCTCCTATACCAGAAGATATTACTCTGGGAAAGAAATATAAAGAGAAGTATAAAGTGAAAGACAGGATAGAAGAAAAACCAAGGGATGGAAAGGACAGAGGACGAGATTTTGAAAGGCAGAGAGAAAAGAGAGACAAACCAAGATCTACTTCCCCGGCAGGACAGCATCATTCTCCTATATCTTCTAGGCATCACTCCTCATCTTCACAATCAGGATCGTCTATTCAAAGACATTCTCCTTCTCCTCGCCGAAAAAGAACTCCTTCACCATCCTACCAACGGACGTTAACTCCATCTTTACGACGTTCTGCTTCTCCTTATCCTTCACATTGTTTGTCTTCTCCTCAGAGAAAGCAAAGTCCTCTAAGACATCGCTCTCCAATGCGAGAGAAAGGGAGGCATGACCATGAGAGGACCTCACAGTCACATGATCGGCGTCATGAAAGGAGAGAAGAAACTAGAGGCAAAAGGGATAGAGAAAAGGATACAAGAGAGGAACGAGAGTATGAGCAGGATCAGAGCTCTTCTAGAGACCACAGAGATGACAGAGAACCCCGAGATGGTCGGGACCGGAGAGATACCAGAGACACTAGAGAACGAAGGGAACTGAGAGATTCCAGAGACCTCCGGGACTCCAGGGAGATGAGGGATTACAGCAGAGACACGAAAGAGAGCCGGGATCCCAGAGACTCTCGGTCCTCTCGTGATGCCCATGATTACCGGGACCGTGAAGGTCGAGATACTCATCGAAAGGAGGAAATGTACCAAGAAGAATCCCGGAGTTATGGCAGAAACCACTTGAGAGAAGAGAGTTCTCGTACTGAAATAAGAAATGATTCCAGAAATGAGTCTCGAAGTGAAATTAGGAATGACCGGATGGGCAGAAGTAGGGGGAGAGTACCAGAGTTACCTGAAAAGGGAAGCCGGGGAACCAGAGGCTCTCAAATTGATAGTCACAGTAGTAGTGGCAACTATCATGACAGCTGGGAGACTCGAAATAGCTACCCTGAGAGAGACAGATATCCAGAAAGAGACAGCAGAGATCAAACAAGGGACTCTTCCTTCGAGAGAAGACATGGGGAGAGAGACCGACGTGACAACAGAGAAAGAGATCAAAGACCAAGCTCACCAATTCGACATCAGGGGAGGAATGACGAGCTTGAGCGTGATGAAAGAAGAGAGGAACGAAGAGTAGACAGAGTGGATGATAGAAGAGATGAAAGAGCTAGAGAAAGAGATAGAGAACGAGAACGAGACAGAGAACGGGAGAGAGAGAGGGAACGGGATCGAGAAAGAGAAAGAGAAAAAGAAAGAGAACTAGAAAGAGAGCGTGCCAGAGAAAGGGAGAGAGAAAGAGAAAGAGAAAAAGAGAGAGACCGTGAAAGGGAGAGAGATCGTGACCATGATCGAGAAAGGGAAAGAGAGAGAGAGCGAGACAGGGAAAAAGAACGAGAGCGAGAAAGAGAAGAAAGGGAGAGGGAGAGAGAACGAGAACGGGAAAGAGAGAGAGAACGGGAAAGAGAGAGAGCAAGAGAAAGGGATAAAGAACGAGAACGTCAGCGGGATTGGGAAGAAAAGGACAAGGGGCGAGATGACCGCAGAGAAAAGCGAGAAGATATCCGAGAAGATCGAAACCCAAGAGATGGACATGATGAAAGAAAATCAAAGAAGCGCTATAGAAATGAAGGGAGTCCCAGCCCTCGGCAGTCACCTAAGCGCCGGCGTGAGCATTCTCCTGACAGTGACACTTACAACAGTGGGGATGACAAAAATGATAAACACAGGCTCTTGAGCCAGGTTGTCCGACCTCAAGAATCTCGTTCTCTCAGCCCATCACACCTCACAGAAGACAGGCAAGGTAGGTGGAAAGAAGAAGATCGTAAACTGGAAAGAAAAGAGAGCTCACGGCACTATGAGGAGCAAGAACTCAAAGAGAAAATTTCTGCTGCAGATAAACAGAGAGAACAGGCAGAACTCCTAGAAAGCTCAAGAGCACGTGCACAAGACATGATGGGCCACCACCAGTGTGAAGATCGTGACATATGTGATCGAGCTTATGACGAAAGTAAGAAAAAGGCAAAACTTCAGAAGAAACCTATCAAGAAAAAAAAAGAGGATGATATTGGGATAGAGAGGGGTAACATTGAGACAATATCTGAAGATGGCCAAGTCTTTTCACCAAAAAAAGGACTGAAGAAGAAAAATATTGAAAAAAAACATAAAAGATCCAAAGGTGATTCTGATATTTCTGATGAAGAAGCAACCCAGCAAAGTAAGAAGAAAAGGGGTCCACGGACGCCCCCCATGACAACCAAAGAGGAACTGGTTGAAATTTCCAGTGGTAAAGATGGCACACCAGAGGATCCTCAGAGGAAAGAAGACACGGCCTTTAGTGACTGGTCTGATGAGGATGTGCCTGACCGGACGGAACTGACAGAACCAGAGCGTGCTGCCACTGCTGCTACTCCTGGTAGTACCCCTTCTCCTCTGTCTTCTCTTCTCCCTCCTCCTCCTCCTGTGGCTGGTGCTGCTGCTGCTCTTGCCTCTGCTGCTGCTACTGCTGGTACCACCTCTGGCACCATTTCCACCTCTGCCACCCCCAACAACAGCAGTGCTCCTTTTGCCAGTGAAGAGTTACATAGAAAATGCCACAGAACACGGGTGGAAAAAGTAGAGGCACCTCACGTGACTATAGAAGATACACCACATCGCAAGCCATTGGATCAAAAGAGGAGCAGCAGCCTCGGGAGCAATCGGAGTAATCGTAGTCACACCTCTGGTCGTTTGCGCTCTCCATCCAATGATTCTGCCCATCGGAGTGGGGATGACCAAGGTGGTCGAAAGAGAGTGCTGCATAGTGGCTCAAGAGATAGAGAAAAAACAAAAAGCCTGGAAATCACAGGAGAGAGAAAATCTAGGATTGATCAGTTAAAGCGTGGAGAACCCAACCGAAGTACTTCTTCAGATCGCCAGGATTCAAGAAGCCATAGTTCAAGAAGAAGTTCTCCTGAGTCAGATCGGCAGGTCCATTCAAGATCTGGGTCGTTTGACAGCAGAGATAGATTTCAAGAACGAGATCGATATGAGCATGATAGAGAGAGGGAGAGAGAGAGGAGAGATACAAGGCCGAGAGACTGGGACCGAGAAGCTGATAAAGATTGGTCACGGAACAGAGATCGTGATAGATTGCGGGAGCGAGAAAGAGACAGAGATAAAAGGAGAGACTTGGACAGGGAGAGAGAGAGACTAATCCCTGATTCTCTTGATAGAGACAGAGAAAGAGATAGAACTTTTGAGAGTTCTTCTCAAATGGAGTCTATGAAACGCAGTGAATCAAAACTGGAGAATGAATATGAAAGAGACCTAGAAGGCTCTTCTCGCGACTCTGTAGCTTTGGATAAAGAAAGAATGGATAAAGATCTGGGGTCTGCACAGGGATTTGAAGACCTGAATAAAGCTGAGAGACCTGAGAGTGTGGAAGGAGATGATGAATCCAAGTTAGATGATGTACATTCATTAGGCTCTGGTGCTGGAGAAGGGTATGAACCAATCAGTGATGATGAGCTAGATGAAATTCTGGCAGGTGATGTGGAAAAGAGAGAGGACCAACAGGACGAGGAGAAGATGCCAGATCCATTAGATGTGATAGATGTGGATTGGTCTGGTCTTATGCCAAAGCATCCAAAAGAACCACGGGAGCCTGGGGCTGCACTCTTAAAATTCACACCTGGAGCTGTTATGCTGAGGGTTGGAATTTCTAAAAAGTTGGCCGGTTCTGAGCTCTTTACCAAAGTAAAAGAAACATGTCAGAGACTATTAGAAAAACCCAAAGATGCTGACAGTCTTTTTGAACATGATTTGGGGGCCCTCAATATGGCTGCGTTACTACGAAAAGAAGAAAGAGCAAATCTTCTTAGTAATCTTGGACCATGTTGTAAAGCATTATGCTTCAGACGGGATTCTGCAATCCGAAAACAGCTTGTTAAAAATGAGAAGGGTACTGTAAAACAAGCTTACACAAATGCTCCAATGGTAGACAATGAATTACTACGATTGAGTCTTCGGTTATTTAAGCGAAAGACTACTTGCCATGCCCCAGGACATGAAAAGATTGAAGATAATAAAATATCACACTCCAATATGCAACAGGAACTGTGTGTGTCCTAA

Related Sequences

XP_004844262.1 Protein

Zc3h13 PREDICTED: zinc finger CCCH domain-containing protein 13 [Heterocephalus glaber]

Length: 1655 aa      View alignments
>XP_004844262.1
MSKIRRKVTVENTKTISDSTSRRPSVFERLGPSTGSTTETQCRNWLKTGNCLYGNTCRFVHGPSPRGKGYSSSYRRSPERPTGDLRERMKNKRQDVDGEPQKRNTEESSSPVRKESSRGRHREKEDIKITKERTPESEEENVEWETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMKLEQENLEKREEIIIKKEVSPEVIRSKLSPSPSLRKSSKSPKRKSSPKSSSASKKDRKTSAVSSPLLDQQRNSKSNQSKKKGPRTPSPPPPIPEDITLGKKYKEKYKVKDRIEEKPRDGKDRGRDFERQREKRDKPRSTSPAGQHHSPISSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSYQRTLTPSLRRSASPYPSHCLSSPQRKQSPLRHRSPMREKGRHDHERTSQSHDRRHERREETRGKRDREKDTREEREYEQDQSSSRDHRDDREPRDGRDRRDTRDTRERRELRDSRDLRDSREMRDYSRDTKESRDPRDSRSSRDAHDYRDREGRDTHRKEEMYQEESRSYGRNHLREESSRTEIRNDSRNESRSEIRNDRMGRSRGRVPELPEKGSRGTRGSQIDSHSSSGNYHDSWETRNSYPERDRYPERDSRDQTRDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERERDREREREKERELERERAREREREREREKERDRERERDRDHDRERERERERDREKEREREREERERERERERERERERERERARERDKERERQRDWEEKDKGRDDRREKREDIREDRNPRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDTYNSGDDKNDKHRLLSQVVRPQESRSLSPSHLTEDRQGRWKEEDRKLERKESSRHYEEQELKEKISAADKQREQAELLESSRARAQDMMGHHQCEDRDICDRAYDESKKKAKLQKKPIKKKKEDDIGIERGNIETISEDGQVFSPKKGLKKKNIEKKHKRSKGDSDISDEEATQQSKKKRGPRTPPMTTKEELVEISSGKDGTPEDPQRKEDTAFSDWSDEDVPDRTELTEPERAATAATPGSTPSPLSSLLPPPPPVAGAAAALASAAATAGTTSGTISTSATPNNSSAPFASEELHRKCHRTRVEKVEAPHVTIEDTPHRKPLDQKRSSSLGSNRSNRSHTSGRLRSPSNDSAHRSGDDQGGRKRVLHSGSRDREKTKSLEITGERKSRIDQLKRGEPNRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRDRFQERDRYEHDRERERERRDTRPRDWDREADKDWSRNRDRDRLRERERDRDKRRDLDRERERLIPDSLDRDRERDRTFESSSQMESMKRSESKLENEYERDLEGSSRDSVALDKERMDKDLGSAQGFEDLNKAERPESVEGDDESKLDDVHSLGSGAGEGYEPISDDELDEILAGDVEKREDQQDEEKMPDPLDVIDVDWSGLMPKHPKEPREPGAALLKFTPGAVMLRVGISKKLAGSELFTKVKETCQRLLEKPKDADSLFEHDLGALNMAALLRKEERANLLSNLGPCCKALCFRRDSAIRKQLVKNEKGTVKQAYTNAPMVDNELLRLSLRLFKRKTTCHAPGHEKIEDNKISHSNMQQELCVS