Sequence detailsNCBI ID: XM_004844177.1 (Coding sequence)  Best Hit

Details from NCBI annotation

Gene Symbol Rcbtb2
Gene Name regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2, transcript variant X3
Entrez Gene ID 101700879

Database interlinks

Part of NW_004624748.1 (SequenceType object (1))

For more information consult the page for NW_004624748.1 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RCBTB2ENSCPOG00000008702 (Guinea pig)

Gene Details

regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2

External Links

Gene Match(Ensembl Protein ID:ENSCPOP00000007812, Guinea pig)

Protein Percentage 95.1%
CDS Percentage 93.77%
Ka/Ks Ratio 0.13208 (Ka = 0.0246, Ks = 0.1861)

RCBTB2ENSG00000136161 (Human)

Gene Details

regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2

External Links

Gene Match(Ensembl Protein ID:ENSP00000345144, Human)

Protein Percentage 95.46%
CDS Percentage 91.89%
Ka/Ks Ratio 0.07324 (Ka = 0.0222, Ks = 0.303)

Rcbtb2ENSMUSG00000022106 (Mouse)

Gene Details

regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2

External Links

Gene Match(Ensembl Protein ID:ENSMUSP00000131588, Mouse)

Protein Percentage 93.83%
CDS Percentage 89.17%
Ka/Ks Ratio 0.06946 (Ka = 0.0302, Ks = 0.4347)

Rcbtb2ENSRNOG00000015054 (Rat)

Gene Details

regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 (Rcbtb2), mRNA

External Links

Gene Match(Ensembl Protein ID:ENSRNOP00000020836, Rat)

Protein Percentage 93.47%
CDS Percentage 88.38%
Ka/Ks Ratio 0.07054 (Ka = 0.0327, Ks = 0.4633)

Genome Location

Sequence SequenceType object (2)

Length: 1656 bp    Location: 6306221..6353240   Strand: +
Raw sequence   
>XM_004844177.1
ATGGAAGAAGAACTTCCTCTTTTCTATGGAGACAGTGGCAAGCCAGTGCAGGCTACTCTGTCATCTTTGAAGATGTTAGACGTGGGAAAGTGGCCAATTTTTTCCCTTTGTTCTGAGGAAGAGCTGCAGTTAATCCGTCAGGCTTGTGTCTTTGGCAATGCTGGCAATGAAGTTTTATATACTACGATAAATGATGAGATTTTTGTGCTTGGCACAAACTGCAGTGGCTGTCTGGGGTTAGGTGATGTCCAGAGCACCCTTGAACCTCGGAGACTGGATTCTTTGAGTGACAAAAAGATAGCTTGCCTCAGCTATGGGAGTGGTCCACACATCATCCTTGCAACAACAGAAGGAGAAGTCTTTACCTGGGGTCATAATGGATATACGCAGCTGGGCAATGGAACAACTAATCATGGTTTAGTGCCCTGTCAGGTCTCTACTAATTTGTCAAACAAACAAGTCATTGAAGTTGCCTGTGGGTCTTACCATTCTTTGGTCCTAACATCTGATGGAGAGGTGTATGCCTGGGGCTATAATAACTCTGGGCAGGTAGGATCTGGATCCACAGCTAATCAGGCGATCCCTCGAAGAGTCACTGGCTGCTTACAGAATAAAGTTGTTGTGAACATAGCATGTGGGCAGATGTGCTCAGTGGCAGTGGTGGACACTGGGGAGGTCTATGTCTGGGGTTACAATGGGAATGGGCAGCTGGGACTTGGCAGCAGTGGCAACCAGCCAACCCCCTGTAGAGTGGCAGCCTTGCAGGGCATTCGTGTGCAGCGGGTTGCCTGTGGCTTCGCACATACATTAGTATTAACAGATGAAGGTCAAGTGTATGCTTGGGGTGCAAATTCTTATGGCCAGTTGGGCACTGGAAATAAAAGTAACCAGTCCTATCCAACCCCTGTCGTTGTGGAAAAGGACAGGATCATAGAGATCGCAGCCTGTCACTCCACCCACACGTCCGCCGCCAAGACCCAGGGTGGGCACGTGTACATGTGGGGCCAGTGCCGGGGCCAGTCAGTGATCCTCCCTCACCTCACCCACTTCTCCTGCACCGACGACGTGTTTGCCTGCTTTGCCAGTCCTGCTGTTACCTGGCGCCTCCTCTCTGTGGAACCTGATGACCACCTCACTGTGGCCGAGTCACTGAAGAGGGAATTTGACAACCCAGATACTGCAGATCTGAAGTTTCTGGTTGATGGAAAGTACATTTATGCACATAAAGTCCTCCTCAAAATTAGGTGTGAGCATTTTCGTTCTTCGTTGGAAGACAGTGAGGATGATACTGTAGAAATGAGTGAATTTTCATATCCTGTATACCGAGCCTTCCTGGAATATCTGTACACAGACAGCATCAGTCTTTCTCCTGAGGAGGCAGTAGGATTACTAGATTTGGCTACATTTTATAGAGAAAATCGTTTGAAAAAGCTCTGCCAACAAACCATCAAGCAAGGAATCTGCGAGGAGAACGCCATCGCTCTTCTCTCTGCTGCTGTGAAATATGATGCCCAGGATTTAGAAGAATTCTGCTTCAGGTTTTGCATAAACCATATGACTGTTGTAACACAAACTTCAGGCTTTGCAGAAATGGACCACGATCTCTTGAAGAACTTCATCAGCAAAGCCAGCAGAGTTGGAGCATTTAAAAATTGA

Related Sequences

XP_004844234.1 SequenceType object (4)

Rcbtb2 PREDICTED: RCC1 and BTB domain-containing protein 2 isoform X3 [Heterocephalus glaber]

Length: 551 aa      View alignments
>XP_004844234.1
MEEELPLFYGDSGKPVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGNAGNEVLYTTINDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFASPAVTWRLLSVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDSEDDTVEMSEFSYPVYRAFLEYLYTDSISLSPEEAVGLLDLATFYRENRLKKLCQQTIKQGICEENAIALLSAAVKYDAQDLEEFCFRFCINHMTVVTQTSGFAEMDHDLLKNFISKASRVGAFKN