Details from NCBI annotation

Gene Symbol Setdb2
Gene Name SET domain, bifurcated 2, transcript variant X2
Entrez Gene ID 101696702

Database interlinks

Part of NW_004624748.1 (Scaffold)

For more information consult the page for NW_004624748.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SETDB2 ENSCPOG00000002194 (Guinea pig)

Gene Details

SET domain, bifurcated 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001990, Guinea pig)

Protein Percentage 84.17%
CDS Percentage 89.4%
Ka/Ks Ratio 0.38403 (Ka = 0.0874, Ks = 0.2277)

SETDB2 ENSG00000136169 (Human)

Gene Details

SET domain, bifurcated 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000326477, Human)

Protein Percentage 78.77%
CDS Percentage 86.61%
Ka/Ks Ratio 0.44508 (Ka = 0.1215, Ks = 0.2729)

Setdb2 ENSMUSG00000071350 (Mouse)

Gene Details

SET domain, bifurcated 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000093450, Mouse)

Protein Percentage 67.49%
CDS Percentage 78.72%
Ka/Ks Ratio 0.40158 (Ka = 0.2047, Ks = 0.5096)

Setdb2 ENSRNOG00000021680 (Rat)

Gene Details

Protein Setdb2

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000066366, Rat)

Protein Percentage 66.38%
CDS Percentage 78.12%
Ka/Ks Ratio 0.3809 (Ka = 0.2086, Ks = 0.5476)

Genome Location

Sequence Coding sequence

Length: 2115 bp    Location: 5238261..5192773   Strand: -
>XM_004844164.1
ATGTATAAACAGCACCAAAAGATGGGAGAAAAAAATGGTGATGCAAAAAGTTTTTGGATGGAGCTAGAGGATAATGGAAAAGTGGACTTCATATTTGAAAAAGTACAAAATGTGCTGCAGTCACTGAAACAAAAGATCAAAGATAGATCTGCCACAAATAAAGAATACATCCAAGCAATGATCCTAGTGAATGATGCAACTATAAGTAAAAATTCAACATTGAAAAAGAATCATACATCTGTGACGCAGAGTGAACAGGAAAACAAGTCAAATGAATTTCCTTCTACATCATACAAAGACTTCTTTCCAAAAGACTGTACATTTCTATCTATAGAAAATAATGCAGTTTTCCCTCTGGAAAATAAAGTTGTAGACTATAGAGAGAGAAAATCACCTATGAATTTATCTTACCAAAGTCATGACTGTTCTGGTGCCTGTCTGATGAAAATGCCATCAACCATCAAGGCAGAAAACCCTCTGCAACTACCAATCACATGTCACTTCCAAAGACGACATGCAAAGACAAACTCTCATTCTTCAGCACTTCATGTGAGTTATAAAGCTCCTTGTGGAAGAAGTCTGCGGAACATAGAGGAAGTCTTTCGTTACCTGCTTGAGACCGAATGTAACTTTTTATTTACAGATAACTTTTCTTTTAATACTTACGTTCAGTTGACTCGGAATTACCAAAAGCAAGAAGAAATTGTTTCTGATGTGGATATTAGCAATGGTGCAGAATTAGTACCCATTTCTTTCTGTAATGAAATTGACAATAGAAAGCTTCCACAGTTTAAGTACAGAAAGACTATGTGGCCACCAGTGTATTATCTGAACAACTTTTCCAACATGTTTACTGATTCCTGTGACTGTTCTGAGGGCTGCATAGACATAACAAAATGTGCATGTCTTCAGCTAACAGCAAGGAATGCCAAAACTTTTTCCTTGTCAAGTGATGAAATAACTACTGGATATAAGTATAAAAGACTGCAGAGACAAATACCTACTGGGATTTATGAATGTAGCCTGTTGTGCAAGTGTGACCCACGAATGTGTCAAAACCGAGTTGTCCAACATGGTCCTCAAGTGAGACTACAGGTGTTCAAAACTGAGAAGAAGGGATGGGGTGTACGCTGCCTAGATGATATTGACAAAGGGACATTTGTTTGCATTTATTCAGGAAGATTACTGAACAGAGCTAACTCTGAGAAACCTAATGCTACTGATGAAAATGGAAAAGAGAATATTATGAAAAATATGTTTTCAAAAAAGAGGAAAATAGAAGTTGCACATTCAGATTGTGAGGCGGAAGTTGGCCCATTAGAAATGGAAACACATCCTAGAAGTGCTAAAACTGAGAACTGTCCACCTAACCTCAGTCATAATCCAGAAGAGCCTGTGATGGAAATAAGCTGTAATAATATTTCAAGAATTCAATATTATTCAGTTATTAGAAGTCCTAAATCCAAGACAGCTGCTTTTCAAGAGAATGGAAAAAAGATGGGATTTATTTCCTTGGATTCTGTCACCTCGGGAGAAAACAATGGATTCTGGAATTGTAAAGCCAGGAGAAAACAAAAGGACTCAAACCAAGTTGGAGATTCTGAAGATAACCAGCTACATGAATCAGATGTGATAGATATAACTAAATGTAGAGAAGAAACTCCACCAGGGGGCAGATGTAACCCAGCAACCACATTTGACAATGAAAATATTAAAAAACCGTTTGAGGTTCAAATTCAAAAGCCCCAAGAAGAAAAATCTCCAGCGCATCAAATCCATCAGGTCTTGTCTGAAGAGTTGCCAAGTGAAACCAAGAATACTTCAGGTACTTCTCCAGTGAAGTCCAGTAAAGGGAATGTGTTTTTATTGGATGCCACAAAAGAAGGAAATGTGGGCCGCTTCCTTAATCATAGCTGTTGTCCAAATCTCTTGGTACAGAATGTTTTTGTAAAAACACATGACAGGAATTTCCCATTGGTGGCATTCTTCACCCACAGGTTTGTGAAAGCAAGAACAGAACTAACGTGGGATTATGGTTATAAAGCTGGGACTTTGCCTAACAAGGAAATCCTTTGCCAATGTGGGGCTAATAAGTGTAGAAAAAAAATATTATAA

Related Sequences

XP_004844221.1 Protein

Setdb2 PREDICTED: histone-lysine N-methyltransferase SETDB2 isoform X2 [Heterocephalus glaber]

Length: 704 aa      View alignments
>XP_004844221.1
MYKQHQKMGEKNGDAKSFWMELEDNGKVDFIFEKVQNVLQSLKQKIKDRSATNKEYIQAMILVNDATISKNSTLKKNHTSVTQSEQENKSNEFPSTSYKDFFPKDCTFLSIENNAVFPLENKVVDYRERKSPMNLSYQSHDCSGACLMKMPSTIKAENPLQLPITCHFQRRHAKTNSHSSALHVSYKAPCGRSLRNIEEVFRYLLETECNFLFTDNFSFNTYVQLTRNYQKQEEIVSDVDISNGAELVPISFCNEIDNRKLPQFKYRKTMWPPVYYLNNFSNMFTDSCDCSEGCIDITKCACLQLTARNAKTFSLSSDEITTGYKYKRLQRQIPTGIYECSLLCKCDPRMCQNRVVQHGPQVRLQVFKTEKKGWGVRCLDDIDKGTFVCIYSGRLLNRANSEKPNATDENGKENIMKNMFSKKRKIEVAHSDCEAEVGPLEMETHPRSAKTENCPPNLSHNPEEPVMEISCNNISRIQYYSVIRSPKSKTAAFQENGKKMGFISLDSVTSGENNGFWNCKARRKQKDSNQVGDSEDNQLHESDVIDITKCREETPPGGRCNPATTFDNENIKKPFEVQIQKPQEEKSPAHQIHQVLSEELPSETKNTSGTSPVKSSKGNVFLLDATKEGNVGRFLNHSCCPNLLVQNVFVKTHDRNFPLVAFFTHRFVKARTELTWDYGYKAGTLPNKEILCQCGANKCRKKIL