Details from NCBI annotation

Gene Symbol Cab39l
Gene Name calcium binding protein 39-like, transcript variant X5
Entrez Gene ID 101725880

Database interlinks

Part of NW_004624748.1 (Scaffold)

For more information consult the page for NW_004624748.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CAB39L ENSCPOG00000003721 (Guinea pig)

Gene Details

calcium binding protein 39-like

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003360, Guinea pig)

Protein Percentage 96.71%
CDS Percentage 92.71%
Ka/Ks Ratio 0.06519 (Ka = 0.0164, Ks = 0.2508)

CAB39L ENSG00000102547 (Human)

Gene Details

calcium binding protein 39-like

External Links

Gene Match (Ensembl Protein ID: ENSP00000348113, Human)

Protein Percentage 96.71%
CDS Percentage 93.51%
Ka/Ks Ratio 0.08062 (Ka = 0.0167, Ks = 0.2069)

Cab39l ENSMUSG00000021981 (Mouse)

Gene Details

calcium binding protein 39-like

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022553, Mouse)

Protein Percentage 95.81%
CDS Percentage 90.02%
Ka/Ks Ratio 0.04945 (Ka = 0.0203, Ks = 0.4112)

Cab39l ENSRNOG00000011603 (Rat)

Gene Details

calcium binding protein 39-like (Cab39l), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000016162, Rat)

Protein Percentage 94.31%
CDS Percentage 89.02%
Ka/Ks Ratio 0.0669 (Ka = 0.0292, Ks = 0.436)

Genome Location

Sequence Coding sequence

Length: 1005 bp    Location: 5293228..5408468   Strand: +
>XM_004844162.1
ATGCCTCTGTTTAGTAAATCACACAGAAATCCAGCAGAAACTGTGAAAATTCTGAAAGACAACATGGCCATTTTGGAAAAGCAAGACAAAAAGACAGACAAGGCTTCAGAAGAAGTGTCAAAATCACTGCAAGCAATCAAAGAAATTCTGTGCGGCACAAATGACAAGGAACCCCCAATGGAGACAGTGGCACAGCTAGCACAAGAACTCTACAACAGTGGGCTGCTGGTGACACTGATAGCCAACCTACAGCTGATAGACTTTGAGGGAAAAAAAGATGTAACCCAGATATTTAACAACATCCTGAGAAGACAGATAGGCACTCGGAGCCCTACTGTGGAGTATATTAGTGCTCATCCTCACATCCTATTTATGCTCCTCAAAGGATATGAAGCCCCACAGATTGCCTTACGTTGTGGGATTATGCTGAGAGAATGCATTCGACATGAACCACTTGCCAAAATCATCCTCTTTTCTAATCAATTCAGAGATTTCTTCAAGTATGTGGAATTGTCAACATTTGATATTGCTTCAGATGCCTTTGCTACTTTTAAGGATTTGTTAACCAGACATAAAGTGTTGGTAGCAGACTTCTTAGAACAAAATTATGACACTATTTTTGAAGACTATGAGAAATTGCTTCAGTCTGAGAATTATGTGACTAAGAGACAATCTTTAAAGCTGCTAGGTGAACTGATCCTGGATCGCCACAACTTTGCCATTATGACCAAGTACATCAGCAAGCCAGAGAACCTGAAGCTAATGATGAACCTCCTTCGAGATAAGAGTCCCAACATCCAGTTTGAAGCCTTTCATGTCTTTAAGGTGTTTGTGGCCAGTCCTCACAAAACGCAGCCCATTGTGGAAATTCTGTTAAAAAATCAACCCAAACTCATTGAGTTTCTGAGCAGCTTCCAAAAGGATAGGACAGATGATGAACAGTTCACTGATGAGAAGAACTACTTGATTAAACAGATTCGAGACTTGAAGAAAACAGCCCCTTGA

Related Sequences

XP_004844219.1 Protein

Cab39l PREDICTED: calcium-binding protein 39-like isoform X5 [Heterocephalus glaber]

Length: 334 aa      View alignments
>XP_004844219.1
MPLFSKSHRNPAETVKILKDNMAILEKQDKKTDKASEEVSKSLQAIKEILCGTNDKEPPMETVAQLAQELYNSGLLVTLIANLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYISAHPHILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIASDAFATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRHNFAIMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIEFLSSFQKDRTDDEQFTDEKNYLIKQIRDLKKTAP