Details from NCBI annotation

Gene Symbol Trim13
Gene Name tripartite motif containing 13, transcript variant X4
Entrez Gene ID 101720863

Database interlinks

Part of NW_004624748.1 (Scaffold)

For more information consult the page for NW_004624748.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIM13 ENSCPOG00000001929 (Guinea pig)

Gene Details

tripartite motif containing 13

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015322, Guinea pig)

Protein Percentage 95.06%
CDS Percentage 92.84%
Ka/Ks Ratio 0.1063 (Ka = 0.0248, Ks = 0.2336)

TRIM13 ENSG00000204977 (Human)

Gene Details

tripartite motif containing 13

External Links

Gene Match (Ensembl Protein ID: ENSP00000348299, Human)

Protein Percentage 92.35%
CDS Percentage 90.78%
Ka/Ks Ratio 0.12449 (Ka = 0.0371, Ks = 0.2981)

Trim13 ENSMUSG00000035235 (Mouse)

Gene Details

tripartite motif-containing 13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000128509, Mouse)

Protein Percentage 89.63%
CDS Percentage 86.09%
Ka/Ks Ratio 0.10064 (Ka = 0.0548, Ks = 0.5442)

Trim13 ENSRNOG00000009075 (Rat)

Gene Details

tripartite motif-containing 13 (Trim13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012035, Rat)

Protein Percentage 89.38%
CDS Percentage 84.86%
Ka/Ks Ratio 0.10536 (Ka = 0.0616, Ks = 0.5844)

Genome Location

Sequence Coding sequence

Length: 1218 bp    Location: 4712601..4683518   Strand: -
>XM_004844148.1
ATGGAGCTGCTTGAAGAAGACCTCACGTGTCCAATTTGCTGCAGTCTATTTGATGATCCTCGAGTTTTGCCTTGCTCACACAACTTCTGCAAAAAATGCCTAGAAGGTCTTCTAGAAGGGAATGTGCGGAATTCTTTGTGGAGACCATCTCCATTCAAGTGCCCTACATGCCGTAAAGAAACTTCAGCTACAGGAGTTAACAGCCTGCAAGTTAATTACTCCCTGAAGGGTATTGTGGAAAAATACAACAAAATCAAGATCTCCCCCAAAATGCCAGTGTGCAAAGGACACTTAGGGCAGCCTCTCAACATTTTTTGCTTAACTGATATGCAGCTGATTTGTGGGATCTGTGCAACTCGAGGTGACCACACCAAGCATGTCTTCTGTTCTATTGAAGATGCCTATGTTCAGGAAAGGGATGCCTTTGAGTCCCTCTTCCAGAGTTTTGAGACCTGGCGTCGGGGAGATGCTCTTTCTCGTTTAGATACCTTGGAAACTAGCAAGAGGAAATCCCTACAGCTACTGACTAAAGATTCTGATAAAGTGAAGGAGTTTTTTGAGAAATTACAACACACATTAGATCAAAAAAAAAATGAAATCCTGTCTGACTTTGAGACCATGAAACTTACAGTTATGCAAGCATATGACCCAGAGATCAACAAACTCAACACAATCTTGCAAGAGCAACGAATGGCCTATAACATTGCTGAGGCTTTCAAAGACGTGTCAGAACCCATCATATTTCTACAACAGATGCAGGAGTTCAGGGAGAAAATCAAAGTAATCAAGGAAACTCCCTTACCCCCCTCTAATTTGCCCACAAGCCCTTTTATGAAAAACTTCGATACCAGTCAGTGGGAGGATATAAAACTAGTAGATGTGGACAAACTTTCTTTGCCTCAAGACACTGGCACATTGATTAGCAAGATTCCCTGGAGCTTCTGTCTGTTACTTGTAGTCCTTCTGCTTGGCCTCATATTCTTTGGCTCTGCCATATTCCTAGAATGGTCTTTGTTTGATGAATTGTCAACATGGAAAGACTATCTTTCAAACTTCAGTTCTTATCTGACTAAAACAGCTGATTTTGTAGAACAATCAGTTTTTTACTGGGAACAAATGATAGATGGGTTTTTCATTTTCAGTGAAAGCGTCAAGAATTTTACTCTGGTGGTGCTGAATAATGTGGCAGAATTTGTGTGCAAATATAAACTATTATAA

Related Sequences

XP_004844205.1 Protein

Trim13 PREDICTED: E3 ubiquitin-protein ligase TRIM13 isoform X4 [Heterocephalus glaber]

Length: 405 aa      View alignments
>XP_004844205.1
MELLEEDLTCPICCSLFDDPRVLPCSHNFCKKCLEGLLEGNVRNSLWRPSPFKCPTCRKETSATGVNSLQVNYSLKGIVEKYNKIKISPKMPVCKGHLGQPLNIFCLTDMQLICGICATRGDHTKHVFCSIEDAYVQERDAFESLFQSFETWRRGDALSRLDTLETSKRKSLQLLTKDSDKVKEFFEKLQHTLDQKKNEILSDFETMKLTVMQAYDPEINKLNTILQEQRMAYNIAEAFKDVSEPIIFLQQMQEFREKIKVIKETPLPPSNLPTSPFMKNFDTSQWEDIKLVDVDKLSLPQDTGTLISKIPWSFCLLLVVLLLGLIFFGSAIFLEWSLFDELSTWKDYLSNFSSYLTKTADFVEQSVFYWEQMIDGFFIFSESVKNFTLVVLNNVAEFVCKYKLL