Sequence details NCBI ID: XM_004844082.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ccdc60
Gene Name coiled-coil domain containing 60
Entrez Gene ID 101719691

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC60 ENSCPOG00000015551 (Guinea pig)

Gene Details

coiled-coil domain containing 60

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014023, Guinea pig)

Protein Percentage 74.46%
CDS Percentage 79.5%
Ka/Ks Ratio 0.36721 (Ka = 0.1849, Ks = 0.5036)

CCDC60 ENSG00000183273 (Human)

Gene Details

coiled-coil domain containing 60

External Links

Gene Match (Ensembl Protein ID: ENSP00000333374, Human)

Protein Percentage 70.14%
CDS Percentage 76.5%
Ka/Ks Ratio 0.33781 (Ka = 0.2155, Ks = 0.6381)

Ccdc60 ENSMUSG00000043913 (Mouse)

Gene Details

coiled-coil domain containing 60

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000049912, Mouse)

Protein Percentage 63.84%
CDS Percentage 69.13%
Ka/Ks Ratio 0.11885 (Ka = 0.2414, Ks = 2.0313)

Ccdc60 ENSRNOG00000032684 (Rat)

Gene Details

coiled-coil domain containing 60 (Ccdc60), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000048419, Rat)

Protein Percentage 61.85%
CDS Percentage 67.65%
Ka/Ks Ratio 0.17052 (Ka = 0.2896, Ks = 1.698)

Genome Location

Sequence Coding sequence

Length: 837 bp    Location: 14088824..14050108   Strand: -
Raw sequence   
>XM_004844082.1
ATGCAGTCTGCGAAGGCTGGCCGTGGATACTTTACCATTCTTAGGGAAGAGTCTGCAATGAAAAAGAAGCAACAGCAACTTCAGAAACGGAGAGAGGAAGAAAGAAATAAGTTCCAACCAGCCAAAATATTACCTGAAATCCATGGGGATATGTTGTCGAGTGAACCCCTCTTTCGCCAACTGTGCGCTCTCCACTGGCTTCTGGAGGCCCTGACCATCGACCACACCCACCACATCATGAAGCCGGTGATCACCTGCTTCAGTACCAAGGACCCAGGTGGAAGCAAGAGCTCAATAAAAAAAGTCAATAAGGACAAGTCCAGGGAACAGAGGTGGGAGCACTTCATCACAGCATCCAAGACCATGAAATTCAAACTTCCTGTGATTCGAAACACCATCCACAAGCCAAGCTGGCGAGGCTCCACACTCAGTCTGTCTCGGACCAGCGGGGGGTCCTCCCCCCAGAGCAGCATGATCTCTGTGAATCCTGGCTCAGAGGAGCCCCAGAGCTTGATCACCCAGGAGACCAGCAGCAAAGACATTGAGGATAACGAGTCCTCTTCGACCAAGCTGGATGAAGAGCCTCTTCATGTCTATCTGCAGAAGCTCCTGGAAATGGTTCGGGAAGATGCCCGTAGGACAGTTACGATGGAAAATGAGATACAAAGAAAAGCTCCCAGATCACTGAGTCCTTTCACACCCATTGTTCCCTACCCATTCCCTCTGCCTGTTATTGATGAATTTACCTGGTGTGGCCTCAACCTCCACTGGGACTCTGGAAGGTGGCACTTGGAAGCACCCAGAGACAAGGTGGGCCCAGAAGGCCCATACTGCTAA

Related Sequences

XP_004844139.1 Protein

Ccdc60 PREDICTED: coiled-coil domain-containing protein 60 [Heterocephalus glaber]

Length: 278 aa      View alignments
>XP_004844139.1
MQSAKAGRGYFTILREESAMKKKQQQLQKRREEERNKFQPAKILPEIHGDMLSSEPLFRQLCALHWLLEALTIDHTHHIMKPVITCFSTKDPGGSKSSIKKVNKDKSREQRWEHFITASKTMKFKLPVIRNTIHKPSWRGSTLSLSRTSGGSSPQSSMISVNPGSEEPQSLITQETSSKDIEDNESSSTKLDEEPLHVYLQKLLEMVREDARRTVTMENEIQRKAPRSLSPFTPIVPYPFPLPVIDEFTWCGLNLHWDSGRWHLEAPRDKVGPEGPYC