Sequence details NCBI ID: XM_004844063.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ttc28
Gene Name tetratricopeptide repeat domain 28
Entrez Gene ID 101702987

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TTC28 ENSCPOG00000027312 (Guinea pig)

Gene Details

tetratricopeptide repeat domain 28

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017839, Guinea pig)

Protein Percentage 96.25%
CDS Percentage 93.07%
Ka/Ks Ratio 0.09392 (Ka = 0.0216, Ks = 0.2305)

TTC28 ENSG00000100154 (Human)

Gene Details

tetratricopeptide repeat domain 28

External Links

Gene Match (Ensembl Protein ID: ENSP00000381003, Human)

Protein Percentage 94.04%
CDS Percentage 89.16%
Ka/Ks Ratio 0.07603 (Ka = 0.0327, Ks = 0.4296)

Ttc28 ENSMUSG00000033209 (Mouse)

Gene Details

tetratricopeptide repeat domain 28

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000137609, Mouse)

Protein Percentage 90.84%
CDS Percentage 84.85%
Ka/Ks Ratio 0.0686 (Ka = 0.051, Ks = 0.7429)

Ttc28 ENSRNOG00000032590 (Rat)

Gene Details

Protein Ttc28

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000044499, Rat)

Protein Percentage 90.65%
CDS Percentage 84.27%
Ka/Ks Ratio 0.06034 (Ka = 0.0504, Ks = 0.836)

Genome Location

Sequence Coding sequence

Length: 7350 bp    Location: 4995316..4309917   Strand: -
Raw sequence   
>XM_004844063.1
ATGGTTAAGATTATACTGAAACTGAAAAAGTTGATCCCTCTCTTTGGTGCCAAGAGTATTGGGCGAAGTTCTGATGAACCAGTACTGAGCAAAGCTGAATTTGTTGAGAAAGTTCGTCAGAGTAACCAGGCCTGTCATGATGGAGATTTCCACACAGCTGTTGTTCTGTATAATGAAGCCCTGGCTGTTGACCCTCAGAACTGCATCTTATACAGCAATAGATCTGCAGCCTACATGAAAATCCAGCAGTATGACAGGGCACTGGATGATGCAATCAAAGCCCGACTTCTCAATCCCAAATGGCCAAAGGCGTACTTCCGACAGGGTGTTGCCCTCCAGTACCTTGGACGTCATGCCGATGCCCTGGCAGCCTTTGCATCTGGACTGGCTCAAGATCCCAAGAGTCTCCAGCTTCTGGTGGGGATGGTAGAGGCCGCCATGAAATCTCCCATGAGAGATTCCCTCGAGCCCACTTATCATCAACTTCAGAAAATGAAACTGGACAAGAGTCCCTTTGTGGTCGTGTCTGTGGTTGGGCAGGAACTCCTGACAGCTGGCCACCATGGGGCCTCTGTGGTTGTCTTGGAAGCTGCTCTGAAGATTGGCACCTGCAGCCTCAAACTGAGAGGTTCTGTGTTCTCTGCCCTGAGCAGTGCTTACTGGTCTCTCGGAAACACAGAGAAGAGCACTGGATATATGCAGCAGGACTTGGATGTAGCCAAGACCTTAGGTGACCAGACAGGAGAATGCCGAGCTCATGGGAATCTGGGTTCTGCATTCTTCTCCAAAGGAAATTATCGGGAGGCTCTCACCAACCACAGACATCAGCTGGTGCTCGCCATGAAACTCAAGGATCGGGAGGCAGCCTCGTCAGCCCTGAGCAGTCTGGGCCATGTGTACACAGCGATTGGAGACTATCCCAATGCACTAGCCAGTCACAAACAGTGTGTTCTTCTTGCCAAGCAATCCAAAGATGAACTTTCCGAAGCCCGAGAACTTGGCAACATGGGTGCAGTGTACATTGCTATGGGTGACTTTGAGAATGCTGTGCAGTGCCATGAGCAGCACCTGAAGATTGCTAAAGACCTGGGAAATAAGCGAGAGGAGGCCCGGGCCTACAGCAACCTGGGCAGTGCCTACCACTACCGGAGGAACTTTGACAAGGCCATGTCTTACCACAACTATGTACTGGAGCTGGCGCAGGAGCTGATGGAGAAGGCCATTGAGATGCGGGCCTATGCTGGCCTAGGCCATGCTGCCAGGTGTATGCAGGATTTGGAGAGGGCAAAACAGTATCATGAGCAGCAGCTGGGCATTGCTGAGGACCTCAAGGACCGGGCTGCAGAGGGGCGTGCATCCTCCAATCTGGGAATCATACATCAGATGAAAGGTGATTATGACACTGCACTGAAACTCCACAAGACCCACCTGTGCATTGCCCAGGAACTGAGCGACTATGCTGCCCAGGGTCGGGCCTACGGGAACATGGGCAATGCCTACAACGCGCTGGGCATGTATGACCAAGCAGTCAAGTACCACCGACAGGAGCTGCAGATCTCCATGGAGGTTAATGATCGTGCCTCACAGGCATCCACACATGGGAACCTTGCGGTGGCCTATCAGGCCCTAGGTGCCCATGACCGAGCCTTGCAGCACTATCAGAACCACTTGAACATAGCCCGGGAGCTTCGAGACATCCAGAGTGAGGCTCGGGCCCTCAGCAACCTAGGAAACTTCCACTGTTCTAGGGGAGAGTATGACCAGGCTGCTCCCTATTATGAACAGTACCTCCAGCTTGCTCCTGACCTTCAAGATATGGAAGGAGAAGGGAAAGTCTGCCACAATCTTGGCTATGCCCATTATTGCCTTGGAAATTACCAAGAGGCAGTGAAATACTATGAGCAGGATCTGGCCCTAGCCAAAGACCTTCATGACAAATTGAGCCAAGCAAAAGCCTACTGCAACTTAGGCCTAGCATTCAAGGCTCTGATGAATTTCAGCAAAGCTGAAGAGTGTCAAAAGTACCTGTTATCCCTAGCCCAGTCCCTGAATAATTCCCAGGCTAAATTTCGAGCCCTAGGGAACTTGGGTGATATATTCATCTGTAAAAAAGATATAAATGGTGCAATAAAATTCTACGAGCAGCAGCTGGGCTTAGCTCACCACATAAAGGACAGAAGACTGGAGGCCAGTGCCTATGCAGCACTGGGCACTGCATACCGAATGATCCAGAAGTATGACAAAGCCTTGGGTTATCACACACAGGAACTGGAGGTGTATCAGGAGCTGAGCGACATGCCGGGCGAGTGCAGAGCTCATGGGCACCTGGCTGCTGTCTACATGGCCCTGGGGAAATACACAATGGCATTCAAGTGCTATGAAGAGCAGCTAGACCTGGGGCAGAAGCTGAAGGATCCAAGTCTAGAAGCTCAGGTCTACGGCAACATGGGCATCACGAAGATGAACATGAATGTGATGGAAGAAGCCATTGGCTACTTTGAGCAGCAGCTGGCCATGCTGCAGCAGCTCAGTGGGAATGAGTCTGTGCTCGACAGAGGCCGGGCCTATGGCAACCTTGGGGATTGCTATGAGGCCCTGAGTGACTATGAGGAAGCTATCAAGTACTATGAGCAGTATCTATCTGTTGCCCAGAGTCTGAATCGTATGCAAGACCAAGCCAAGGCTTACCGGGGTCTAGGAAATGGACACAGGGCAATGGGGAGCTTGCAGCAAGCCCTTGTGTGCTTTGAAAAGAGGCTCGTGGTTGCCCATGAGCTTGGGGAGGCCTTCAATAAAGCCCAGGCCTATGGAGAGCTGGGAAGTCTTCACAGCCAATTAGGAAATTATGAACAAGCTATTTCCTGCCTTGAACGACAGCTGAACATTGCTAGAGAGATGAAAGACCGAGCCCTGGAGAGTGATGCGGCCTGTGGCCTGGGGAGCGTCTACCAGCAGATGGGGGAGTATGATACAGCCCTGCAGTACCACCAGCTTGATCTGCAGATAGCCGAGGAAACCAACAACCCCACATGCCAGGGGCGAGCCTATGGAAACCTCGGCCTGACATATGAGTCCCTAGGTACCTTTGAGAGGGCTGTGGTCTATCAAGAACAGCACTTGAGCATCGCTGCACAGATGAATGACTTAGTAGCCAAGACGGTGTCTTACAGTAGCCTTGGAAGGACCCATCATGCTTTGCAGAACTATTCCCAGGCAGTCATGTACTTACAGGAAGGATTGAGGTTAGCTGAACAACTAGGCCGAAGAGAAGATGAGGCAAAAATTCGCCATGGCCTTGGCCTGTCCCTTTGGGCAAGTGGGAACCTGGAGGAGGCCCAACACCAGCTTTACAGGGCATCAGCCTTGTTTGAAACAATCCGGCACGAGGCGCAGCTGAGCACGGACTACAAGCTGTCCCTCTTTGACCTGCAGACATCATCCTACCAGGCCTTGCAGCGGGTGCTCGTCAGCCTGGGCCACCTTGATGAAGCCCTGGCTGTGGCAGAAAGAGGTCGGACAAGGGCATTTGCTGATCTGCTGGTGGAACGACAAACAGGACAACAGGACTCGGACCCCTACTCCCCAGTCACCATCGATCAGATCTTAGAAATGGTTAATGCCCAGCGAGGACTCGTGCTTTACTACTCCCTGGCTGCAGGGTACCTGTATAGCTGGCTGCTTGCTCCTGGGGCAGGCATCCTGAAGTTTCATGAGCACTACCTGGGTGACAACGCAGTGGAGAGCTGCAGTGACTTCCAGGCTGGGAGCAGTGTTATGCTGCCAACAGCAACCAGCTCAGTCCTGGAGCAGCACATCATCAGTGTGCGCGAGGCCCTGGGTGTGGAGTCTTACTACTCCAGGGCCTGTGCCAGCAGTGAAACAGAAAGTGAAGCCGGAGACATCATGGACCAGCAGTTTGAAGAGATGAACAACAAACTCAACTCTGTTACCGATCCCACTGGCTTTCTTCGGATGGTTCGCCGCAATAACCTCTTTAACAGGAGCTGCCAGAGCATGACGAGCTTGTTCAGTAACACCATGTCACCCATCAAGGACGGGACCTCCTCTCTCCCCCGGAGGCAGAGCTCCTTTGCCAAGCCCCCACTCCGTGCTCTGTATGACCTGCTCATCGCACCCATGGAAGGGGGCCTGATGCACTCCAGCGGCCCTGTAGGCCGGCACCGGCAACTGGTCTTGGTTCTGGAGGGGGAACTCTACCTCATCCCCTTTGCCCTCCTGAAGGGCAGCTCCTCCAACGAGTACCTGTATGAACGCTTCACCCTCATTGCTGTGCCTGCCATCCGCTCACTTGGCCAATACTCGAAGGGTCACCTGAGGAAGAGCCCACCCACGTACTCCAGCTCTACATCCATGGCGGCTGTCATCGGCAACCCCAAACTCCCATCAGCAGTGATGGACAGGTGGCTGTGGGGGCCTATGCCATCAGCTGAGGAGGAAGCCTATATGGTGTCTGAGCTGCTGGGCTGCCAGCCCCTGGTGGGCAGTGTGGCCACCAAGGAGAGGGTCATGAGTGCCCTGACCCAGGCTGAGTGTGTCCACTTTGCCACCCACATCTCCTGGAAATTGTCAGCCTTGGTCCTCACACCCAATGTGGATGGCAACCCTGCCAGCAGCAAGAGCTCCTTCGGCCACCCTTACACAATCCCTGAGTCCCTGCGGGTACAGGACGATGCCAGTGATGGGGAGAGTATCTCAGACTGCCCGCCTCTGCGGGAGCTGCTGCTCACAGCCGCTGACCTCCTGGACCTGCGGCTGCCTGTGAAGCTTGTGGTACTTGGCTCCTCCCAAGAGGCCAATAGCAGGGCAACTGCCGACGGGGTGGTGGCACTGACTCGAGCCTTCCTGGCTGCTGGTGCACAGTGTGTCCTTGTGTCTCTGTGGCCAGTGCCAGTGGCAGCTTCCAAGATGTTCATCCATGCCTTCTACTCGTCCCTGCTGAATGGCTTGAAGGCCAGTGCTGCTCTGGGAGAGGCCATGAAGGTGGTGCAGAGCAGCAAGGCCTTCTCGCACCCCTCCAACTGGGCAGGGTTCCTTCTCATCGGGAGTGATGTGAAACTGAACAGTCCCTCCTCACTCATTGGCCAGGCCCTCACGGAGATCTTGCAACACCCAGAGCATGCACGGGATGCCTTGCGAGTGCTGCTGCACCTGGTGGAGAAATCCCTGCAGCGCATCCAGAATGGGCAGCGCAATGCCATGTACACCTCCCAGCAGAGTGTGGAGAACAAAGTGGGTGGCATCCCCGGCTGGCAGGCCCTCCTCACTGCCGTGGGCTTCCGGCTAGACCCCCCAGCCAGCGGCCTGCCAGCAGCTGTCTTCTTCCCGACTTCCGACCCAGGCGACCGGCTCCAGCAGTGCAGCAGCACACTCCAGTCCCTGCTGGGTCTGCCTAATCCTGCCCTTCAGGCCCTGTGCAAACTCATCACTGCCTCTGAGACAGGCGAGCAGCTCATCAGCCGGCTCCACCAGGTGCTGGTCCAGCTGCAGGCTGGTGAGAAGGAACAGGACTTCACCTCGGCTCCCATTCAGGTTTCCATCAGCGTCCAGCTATGGCGGCTCCCAGGATGCCACGAGTTCCTGGCGGCTCTCGGTTTTGATCTCTGTGAGGTGGGTCAGGAGGAAGTTATCCTGAAAACTGGGAAACAAGCAAGTCGGCGCACCATGCACTTTGCGCTCCAGTCCCTGCTGTCTCTCTTTGATTCCACTGAGCTCCCCAAGCGCCTCAGCCTGGACAGCTCATCCTCCCTGGAGTCACTGGCCTCAGCCCAGTCTGTCTCTAATGCTCTGCCCTTGGGCTATCAGCATCCACCCTTTTCACCCACCGGGGCCGAAAGCATTGCCTCTGATGCCATCTCGGTGTACAGTCTGAGCTCCATCGCTTCCTCCATGAGCTTTGTCTCCAAACCCGAGGTGGGATCAGAAGCTGGAGGCCCCAGAGGGCGGCAGGACTACGACAGGCCCAAGAACAGTTACCCCCAGGGATCTACCCTGCCGCGGAACCAGTTATCCCCACAGACCCATCCTGCCGACAGCAAAGAAGAGGAGGAATATGAAGGTTTCTCCATCATCAGCACAGAGCCCCTGGCAGCCTACCAGGAGAGTAAAAAGACACGCTTCTCCCCAGACCACAGGCAGCCCCGCACTGGGGCAGCTCCAGGTGTGAAGGTTTCAGTTAGCTCCAAGGGCAGCATGAGCACTCCAAATTCCCCAGTGAAGATGACTCTGATCCCTAGCCCAAACTCACCCTTCCAAAAGGTGGGGAAGCTAGCAAGCTCAGACACAGGCGAGTCAGACCAGTCCAGCACCGAGACAGACAGCACAGTGAAGTCCCAAGAAGAAAGCACCCCACAGCTAGATCCCCAGGAGTTGGCCCAGAAAATCCTAGAGGAGACGCAAAGTCACCTTATTGCAGTGGAGCGTCTTCAGAAGAGTGGCAGTCAGGTGGGCAAGATTCACAATCGGGAAGATGGTGTGTCAGTGCCAAATAACAGTGCCACTGTCTTCAGGGCGTCGGAAACAAGCGCCTTCAGCAGACCTGTGCTATCCCATCAGAAGAGCCAACCATCCCCAGTCACTGTCAAACCAAAGCCCCCAGCCAGGAGCTCATCCCTGCCCAAGGTGAGCTCTGGATACAGCAGCCCTACCACCTCGGAGGCATCCCTCAAAGACAGTCCAAGCCAACACAGTGGCCGCCCGTCCCCCAGCTGTGACTCCCAGGCCTCCCTGTCTGATCAGCCACTCTTTAAACTAAAGTACCCCAGCTCTCCTTACAGTGCACACATTTCCAAGTCACCACGGAACATGTCGCCAAGCTCCGGCCACCAATCCCCTGCTGGCAGTGCCCCATCACCTGCACTCTCCTACTCCTCAGCAGGCTCTGCATGCTCAAGTCCGGCAGATGCTCCTGACCTAGACAAGCTGAAGCTGGCAGCCATCGACGAGAAGGTACAGGCTGTGCACAACCTAAAGATGTTCTGGCAGAATGCAGCCCCGCATTCCACAGGCCCCATGAAACCATCGAGAGGGCTTCCAGGAACTATGGCCACCAAAAGAGATGTGTTCAGCCTGCTAAACTTGTCACCTCGGCACAACAAGAAGGAGGAAGGGGCAGATAAGCTGGAACTTCAGGAGCTGTCTCTGCAGCGGCGGGATGAGGTGCCTCCCAGAGCCCCTCCCAACGGCCACTGGCGCGCTGAGACTACAGGGCTGGGCCCGCTGCTGCCCACTGGCCCTCTCGCCCCAGCACCCGAACGCCCCCTAAGACTCCCTTCTGCTAATGGCTATAAGTTCCTATCCCCGGGAAGGTTCTTCCCTTCTTCCAAATGCTGA

Related Sequences

XP_004844120.1 Protein

Ttc28 PREDICTED: tetratricopeptide repeat protein 28 [Heterocephalus glaber]

Length: 2449 aa      View alignments
>XP_004844120.1
MVKIILKLKKLIPLFGAKSIGRSSDEPVLSKAEFVEKVRQSNQACHDGDFHTAVVLYNEALAVDPQNCILYSNRSAAYMKIQQYDRALDDAIKARLLNPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDSLEPTYHQLQKMKLDKSPFVVVSVVGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWSLGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAKDLGNKREEARAYSNLGSAYHYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCSRGEYDQAAPYYEQYLQLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDLHDKLSQAKAYCNLGLAFKALMNFSKAEECQKYLLSLAQSLNNSQAKFRALGNLGDIFICKKDINGAIKFYEQQLGLAHHIKDRRLEASAYAALGTAYRMIQKYDKALGYHTQELEVYQELSDMPGECRAHGHLAAVYMALGKYTMAFKCYEEQLDLGQKLKDPSLEAQVYGNMGITKMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALSDYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGNGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAYGELGSLHSQLGNYEQAISCLERQLNIAREMKDRALESDAACGLGSVYQQMGEYDTALQYHQLDLQIAEETNNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQLYRASALFETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHLDEALAVAERGRTRAFADLLVERQTGQQDSDPYSPVTIDQILEMVNAQRGLVLYYSLAAGYLYSWLLAPGAGILKFHEHYLGDNAVESCSDFQAGSSVMLPTATSSVLEQHIISVREALGVESYYSRACASSETESEAGDIMDQQFEEMNNKLNSVTDPTGFLRMVRRNNLFNRSCQSMTSLFSNTMSPIKDGTSSLPRRQSSFAKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYLYERFTLIAVPAIRSLGQYSKGHLRKSPPTYSSSTSMAAVIGNPKLPSAVMDRWLWGPMPSAEEEAYMVSELLGCQPLVGSVATKERVMSALTQAECVHFATHISWKLSALVLTPNVDGNPASSKSSFGHPYTIPESLRVQDDASDGESISDCPPLRELLLTAADLLDLRLPVKLVVLGSSQEANSRATADGVVALTRAFLAAGAQCVLVSLWPVPVAASKMFIHAFYSSLLNGLKASAALGEAMKVVQSSKAFSHPSNWAGFLLIGSDVKLNSPSSLIGQALTEILQHPEHARDALRVLLHLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLDPPASGLPAAVFFPTSDPGDRLQQCSSTLQSLLGLPNPALQALCKLITASETGEQLISRLHQVLVQLQAGEKEQDFTSAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQASRRTMHFALQSLLSLFDSTELPKRLSLDSSSSLESLASAQSVSNALPLGYQHPPFSPTGAESIASDAISVYSLSSIASSMSFVSKPEVGSEAGGPRGRQDYDRPKNSYPQGSTLPRNQLSPQTHPADSKEEEEYEGFSIISTEPLAAYQESKKTRFSPDHRQPRTGAAPGVKVSVSSKGSMSTPNSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEESTPQLDPQELAQKILEETQSHLIAVERLQKSGSQVGKIHNREDGVSVPNNSATVFRASETSAFSRPVLSHQKSQPSPVTVKPKPPARSSSLPKVSSGYSSPTTSEASLKDSPSQHSGRPSPSCDSQASLSDQPLFKLKYPSSPYSAHISKSPRNMSPSSGHQSPAGSAPSPALSYSSAGSACSSPADAPDLDKLKLAAIDEKVQAVHNLKMFWQNAAPHSTGPMKPSRGLPGTMATKRDVFSLLNLSPRHNKKEEGADKLELQELSLQRRDEVPPRAPPNGHWRAETTGLGPLLPTGPLAPAPERPLRLPSANGYKFLSPGRFFPSSKC