Details from NCBI annotation

Gene Symbol Chfr
Gene Name checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase, transcript variant X2
Entrez Gene ID 101722853

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHFR ENSCPOG00000013980 (Guinea pig)

Gene Details

checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012597, Guinea pig)

Protein Percentage 88.22%
CDS Percentage 90.08%
Ka/Ks Ratio 0.26422 (Ka = 0.0633, Ks = 0.2396)

CHFR ENSG00000072609 (Human)

Gene Details

checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSP00000392395, Human)

Protein Percentage 84.11%
CDS Percentage 84.82%
Ka/Ks Ratio 0.18039 (Ka = 0.088, Ks = 0.488)

Chfr ENSMUSG00000014668 (Mouse)

Gene Details

checkpoint with forkhead and ring finger domains

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000014812, Mouse)

Protein Percentage 79.88%
CDS Percentage 82.35%
Ka/Ks Ratio 0.19913 (Ka = 0.1091, Ks = 0.548)

Chfr ENSRNOG00000037430 (Rat)

Gene Details

checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase (Chfr), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000053478, Rat)

Protein Percentage 80.64%
CDS Percentage 82.45%
Ka/Ks Ratio 0.20419 (Ka = 0.1099, Ks = 0.5382)

Genome Location

Sequence Coding sequence

Length: 1989 bp    Location: 28221810..28187358   Strand: -
>XM_004844038.1
ATGGAACTGCCCGGGGAAGACGAGCAGCCTCAGCTTCCGCAGCCCTGGGGCCGGCTTCTTCGCCTGGGCGCGGAGCAGGGCGAACCGCACGTCCTCCTGCGGAAGCGCGAATGGACCCTCGGGCGCCGGAGAGGTTGTGACCTCTCATTCCCCAGCAATAAACTGGTCTCTGGAGATCACTGTAAAATTGTAGTGGATGAAAAATCTGGTCAGGTGACACTGGAAGATACCAGCACCAATGGAACAGTAATCAACAAGTTGAAGGTTGTTAAGAAGCAAACTTATCCTTTACAGACTGGGGATGTCATCTACCTGGTGTACAGGAAGAATGAGCCGGAATATAATGTGGCGTACCTCTACGAATCTTTAAATGAAAAGCAAGGCGTGACACAGGAATCCTTTGAAGCCAATAAAGAAAACATGTTCCACATGACCAAAGATGCCTCAGGTCCAGGGCGGGGGGATGGCCTCCAGGTCCCACCACCATTGCCTGCTGCCCAACTGTGCTTGGAAGAACCACAGCCATCGACATCGACATCAGACCTCTTCTCCACAGCTGCTTCCTCTTCCACGGAGCTGAGCTGTGTAGCGCGAGAACATTCCTCCAGCTCAGGGTCTGGAGATGCAGGCATCTCCCCAAAAGGATGTGGTCCATTTGTAGCAAGTGACGAACTCTCCAGCCTCACTTCAGCTCTCCCAGACAGAGATGGTGCACCCTATTCTTTGTTAGGGCCCCAGCACCAGGAGGATTTGGAGCCCATGAAGAAGAAGGTGAAAGAAGATGGGGAGCTGGATCCAAACCTGCCATCGGTGGTCACAGACCAGTGTAGAAGTGCCCAGGCCACCCATGAGGACACAAGAGCTGTCACCATGAAGCCAGACAAGATGGAAGAGACTCTCACATGCATCATCTGCCAGGACCTGCTTCATGACTGTGTGAGTTTGCAGCCTTGCATGCACACGTTCTGTGCAGCCTGCTACTCTGGTTGGATGGAGCGCTCATCCCTGTGCCCCACATGCCGGTGTCCAGTGGAGAGAATCTGTAAAAACCACATCCTCAACAACCTTGTGGAAGCATACCTCATCCAGCACCCAGACAAGAGTCGCAGTGAAGATGATGTGCGAAGTATGGATGCCAGGAATAAAATCACTCAAGACATGCTGCAGCCCAAAGTTAGGAGGTCTTTCTCTGATGAGGAAGGGAGTTCAGATGACCTGCTGGTGCTGTCAGATGTTGACAGCGAATCCTCAGACATAAGCCAGCCATACATTGTGTGCAGACAGTGTCCGGAGTACAGAAGACAAGTGATGCAGCCCCTTTCCTGCCCAGCATCAGACAGCGTACTGGGGGCCCCACAGACCCTTGGGCGGGATGCACCATCAACCTCCACCAGCTTCACCTCAGCCCAGGACTACGAGTGCCCTGTGCAAGGAAGCCACGCCATCTGCACCTGCTGCTTCCAGCCCATGCCTGACCGGAGAGCTGAGCGCGAGCAGGATCCCCACGTCCCACCCCAGCAGTGTGCAGTTTGTCTGCAGCCCTTCTGCCACCTGTACTGGGGCTGTACCCGGACTGGCTGCTCCGGCTGCCTCGCCCCATTCTGTGAGCTCAACCTGGGGGACAAGTGTCTGGATGGAGTGCTGAACAACAACAACTACGAGTCAGACATCCTGAAGAATTACCTGGTAACCAGGAGTCTGACATGGAAAAACATGTTGTCAGAAAGTCTCATGGCTCTGCAGCGGGGAGTGTTTTTACTGTCTGATTACAGGGTGACTGGGGACACAGTGCTGTGCTACTGCTGTGGCCTGCGCAGCTTCCGCGAGCTGAGCTATCAGTACCGGCGGAACATTCCCGCTTCTGAATTGCCGGCGGCTGTGACATCCCGTCCTGACTGCTACTGGGGCCGTAACTGCCGCACGCAGGTGAAGGCCCACCATGCGATGAAATTTAATCATATCTGTGAGCAGACAAGGTTCAAGAACTGA

Related Sequences

XP_004844095.1 Protein

Chfr PREDICTED: E3 ubiquitin-protein ligase CHFR isoform X2 [Heterocephalus glaber]

Length: 662 aa      View alignments
>XP_004844095.1
MELPGEDEQPQLPQPWGRLLRLGAEQGEPHVLLRKREWTLGRRRGCDLSFPSNKLVSGDHCKIVVDEKSGQVTLEDTSTNGTVINKLKVVKKQTYPLQTGDVIYLVYRKNEPEYNVAYLYESLNEKQGVTQESFEANKENMFHMTKDASGPGRGDGLQVPPPLPAAQLCLEEPQPSTSTSDLFSTAASSSTELSCVAREHSSSSGSGDAGISPKGCGPFVASDELSSLTSALPDRDGAPYSLLGPQHQEDLEPMKKKVKEDGELDPNLPSVVTDQCRSAQATHEDTRAVTMKPDKMEETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEDDVRSMDARNKITQDMLQPKVRRSFSDEEGSSDDLLVLSDVDSESSDISQPYIVCRQCPEYRRQVMQPLSCPASDSVLGAPQTLGRDAPSTSTSFTSAQDYECPVQGSHAICTCCFQPMPDRRAEREQDPHVPPQQCAVCLQPFCHLYWGCTRTGCSGCLAPFCELNLGDKCLDGVLNNNNYESDILKNYLVTRSLTWKNMLSESLMALQRGVFLLSDYRVTGDTVLCYCCGLRSFRELSYQYRRNIPASELPAAVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN