Details from NCBI annotation

Gene Symbol Mmp17
Gene Name matrix metallopeptidase 17 (membrane-inserted)
Entrez Gene ID 101714022

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MMP17 ENSCPOG00000019867 (Guinea pig)

Gene Details

matrix metallopeptidase 17 (membrane-inserted)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019120, Guinea pig)

Protein Percentage 92.44%
CDS Percentage 89.73%
Ka/Ks Ratio 0.05022 (Ka = 0.0347, Ks = 0.6905)

MMP17 ENSG00000198598 (Human)

Gene Details

matrix metallopeptidase 17 (membrane-inserted)

External Links

Gene Match (Ensembl Protein ID: ENSP00000353767, Human)

Protein Percentage 83.16%
CDS Percentage 83.91%
Ka/Ks Ratio 0.09424 (Ka = 0.0867, Ks = 0.9198)

Mmp17 ENSMUSG00000029436 (Mouse)

Gene Details

matrix metallopeptidase 17

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031390, Mouse)

Protein Percentage 84.49%
CDS Percentage 80.89%
Ka/Ks Ratio 0.06276 (Ka = 0.0815, Ks = 1.2985)

Mmp17 ENSRNOG00000023643 (Rat)

Gene Details

matrix metallopeptidase 17 (Mmp17), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000037549, Rat)

Protein Percentage 84.6%
CDS Percentage 80.45%
Ka/Ks Ratio 0.0571 (Ka = 0.0826, Ks = 1.4463)

Genome Location

Sequence Coding sequence

Length: 1746 bp    Location: 27659060..27671088   Strand: +
>XM_004844006.1
ATGGTACGCGGAGCAGCTTGGGGCCCCGGCCCGCCGCCCCGCTGCCCGGCCCCGTGCCCGCCGCTGCCGCTGCTGCTGCTGCTGTTCGCGCTGCCCGCCCACGGGACCTACGCTGCGCCCGCGCCCCGCGCCGAAGAGCTCAGCTTGGGGATGGAGTGGCTGAGCAGGTTCGGCTACCTGCCTGCTGCCGACCCTGCCACTGGGCAGCTGCAGACGCAGGAGGAGCTGTCCAAAGCCATCTCCGCCATGCAGCAGTTTGGTGGCCTGGAGGCCACGGGTGTCCTGGACCCGGCTACCCTGGCCCTCATGCGGACGCCACGCTGCTCTCTCCCGGACCTGCCCCCCGTGGCCCGGTCACGCAGGAGGCGCCAGGCCCAGGCCCCGACCAAGTGGAGCAAGCGGAACCTGTCCTGGAGGGTGCGCACGTTCCCCCGGGACTCGCCCCTGGGCCGGGACACGGTGCGGGCGCTCATGTACTACGCGCTCAAGGTGTGGAGCGACATCGCGCCCCTCAACTTCCACGAGGTGGCGGGCAGCACGGCCGACCTCCAGATCGATTTCTCCCGGGCTGAGCACAACGACCGCTACCCCTTCGACGGCCCTGGCGGCACCGTAGCCCACGCCTTCTTCCCTGGCGACCGCCACGCCGCGGGGGATGCCCACTTTGACGATGATGAGGCCTGGACCTTCCGCTCCGCGGATGCACACGGGATGGACCTGTTCGCAGTGGCCGTCCATGAGTTTGGCCACGCCATCGGGTTAGGCCACGTGGCTGCCACCGGCTCCATCATGCAGCCCTACTACCAGGGCCCCGTGGGTGACCCGCTGCGCTACGGACTCCCCTACGAGGACCGAGTGCGTGTGTGGCAGCTGTACGGTGTGCGGGACTCCGTGTCCCCCACGGCACAGCCGGACACCCCCGAGCCCGAGGAGCCTCCCCCGCTGCCCGAGCCCCCTGACAATCGCTCCAGCACCGCGCCCCAGAGGGACGTGCCCCACAGATGCAGCGCCCACTTCGATGCGGTGGCCCAGATCCGAGGTGAAGCCTTCTTCTTCAAAGGCAGGTACTTCTGGCGGCTGACGCGGGATCGGCACCTGGTGTCACTGCAGCCGGCGCAAATGCACCGCTTCTGGCGGGGGTTGCCACGGCACCTGGACGGCGTGGACGCCGTGTACGAGCGCACCAGTGACCACAAGATCGTCTTCTTCCGAGGAGACCGATACTGGGTGTTCAAGGACAACAACGTCGAGGAAGGGTACCCTCGGCCCATCTCCGACTTCAGCCTCCCGCCAGGCGGCGTGGACGCAGCCTTCGCCTGGGCCCACAATGACCGGACTTACTTCTTCAAGGACCAGCTGTACTGGCGCTACGACGACCACACGCGGAGCATGGACCCCGGCTACCCTGCCCAGGGCCCCCTGTGGAGGGGGGTCCCCAGCAGGCTGGACGACGCCATGCGCTGGTCCGATGGGGCCTCCTACTTCTTCCGCGGCCGGGAGTACTGGAAGGTGCTGGACGGCGAGCTGGAGGCGGCAGCTGGGTACCCACAGTCCACTGCGCGGGACTGGCTGGTGTGCGGGGAGCCCCGGGCCGGCGTGAGCGTGGGCGGGGCACAGGGCGGGCCCCAGGGCCGCACGCAGGACGGGCCGGCCGTGTGCTCCTGCTCGGCTGCCGCACGCACACTGCCCCTGCTCCTGCCACCCCTGCTGCCTGGCGCGCTGGGCGCTCTGGCACGGGCCCCGTGA

Related Sequences

XP_004844063.1 Protein

Mmp17 PREDICTED: matrix metalloproteinase-17 [Heterocephalus glaber]

Length: 581 aa      View alignments
>XP_004844063.1
MVRGAAWGPGPPPRCPAPCPPLPLLLLLFALPAHGTYAAPAPRAEELSLGMEWLSRFGYLPAADPATGQLQTQEELSKAISAMQQFGGLEATGVLDPATLALMRTPRCSLPDLPPVARSRRRRQAQAPTKWSKRNLSWRVRTFPRDSPLGRDTVRALMYYALKVWSDIAPLNFHEVAGSTADLQIDFSRAEHNDRYPFDGPGGTVAHAFFPGDRHAAGDAHFDDDEAWTFRSADAHGMDLFAVAVHEFGHAIGLGHVAATGSIMQPYYQGPVGDPLRYGLPYEDRVRVWQLYGVRDSVSPTAQPDTPEPEEPPPLPEPPDNRSSTAPQRDVPHRCSAHFDAVAQIRGEAFFFKGRYFWRLTRDRHLVSLQPAQMHRFWRGLPRHLDGVDAVYERTSDHKIVFFRGDRYWVFKDNNVEEGYPRPISDFSLPPGGVDAAFAWAHNDRTYFFKDQLYWRYDDHTRSMDPGYPAQGPLWRGVPSRLDDAMRWSDGASYFFRGREYWKVLDGELEAAAGYPQSTARDWLVCGEPRAGVSVGGAQGGPQGRTQDGPAVCSCSAAARTLPLLLPPLLPGALGALARAP