Sequence details NCBI ID: XM_004844004.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Sfswap
Gene Name splicing factor, suppressor of white-apricot homolog (Drosophila), transcript variant X2
Entrez Gene ID 101713204

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SFSWAP ENSCPOG00000005280 (Guinea pig)

Gene Details

splicing factor, suppressor of white-apricot homolog (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004749, Guinea pig)

Protein Percentage 93.59%
CDS Percentage 90.63%
Ka/Ks Ratio 0.11887 (Ka = 0.0376, Ks = 0.3166)

SFSWAP ENSG00000061936 (Human)

Gene Details

splicing factor, suppressor of white-apricot homolog (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSP00000437738, Human)

Protein Percentage 91.77%
CDS Percentage 86.36%
Ka/Ks Ratio 0.07042 (Ka = 0.0425, Ks = 0.6039)

Sfswap ENSMUSG00000029439 (Mouse)

Gene Details

splicing factor, suppressor of white-apricot homolog (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000062413, Mouse)

Protein Percentage 91.32%
CDS Percentage 85.36%
Ka/Ks Ratio 0.0662 (Ka = 0.0463, Ks = 0.7001)

SFSWAP ENSRNOG00000000931 (Rat)

Gene Details

Splicing factor, suppressor of white-apricot homolog

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001235, Rat)

Protein Percentage 91.01%
CDS Percentage 85.33%
Ka/Ks Ratio 0.06693 (Ka = 0.0475, Ks = 0.7098)

Genome Location

Sequence Coding sequence

Length: 2847 bp    Location: 27588655..27653700   Strand: +
Raw sequence   
>XM_004844004.1
ATGTACGGCGCGGGAGGTGGCCGCGCCAAGCCGGAGAGGAAAGGCGGCGCGAAGGAGGAGGCCGGGTCCGGCGGCGCAGGGGGTGGCGGCAGCCGAGTGGAGCTGCTGGTCTTCGGCTATGCCTGCAAACTGTTTCGGGACGACGAGCGGGCCCTGGCCCAGGAGCAGGGACAGCATCTCATCCCTTGGATGGGGGACCCCAAGATCCTCATCGACAGATACGATGGGCGCGGTCACCTGCATGACCTCTCTGCGTATGATGCCGAGTATGCCACTTGGAACAGAGACTACCAGCTGTCGGAAGAGGAGGCGCGAGTAGAGGCGCTGTGTGATGAAGAGAGGTATTTAGCCTTGCATACGGACTTGCTTGAGGAGGAGGCAAGGCAAGAGGAAGAGTACAAGCGATTGAGTGAAGCCCTGGCGGAGGATGGGAACTACAGCGCTGTAGGGTTCACTTATGGCAGTGACTACTATGACCCATCAGAGCCCACGGAGGAGGAAGAACCTTCGAAACAGAGAGAAAAAAATGAGGCTGAAAACTTGGAAGAAAACGAAGAGCCTTTCATTGCTCCATTAGGACTGAACGTCCCCCCAGATGTGGAGCTGCCACCCACTGCCAAGATGCACGCCATCATCGAGCGCACGGCCAACTTCGTGTGCAAGCAGGGAGCGCAGTTTGAAATAATGCTGAAAGCCAAGCAGGCCCGGAACTCTCAGTTTGACTTCCTGCGTTTCGATCACTACCTCAATCCCTACTACAAGTTCATCCAGAAGGCTATGAAGGAGGGACGATACACAGTGTTGGCAGAAAACAAGAACGAAGAGAAAAAAAAGTCGGGGACGAACTCTGACAATGAGGATGAAGATGAGGAGGAAGATGGGAGTTACCTGCACCCATCTCTCTTTGCCTCCAAGAAGAGCAGCCGCCTTGAAGAGCTGATGAAGCCCTTGAAGGTGGTGGACCCAGACCACCCCTTAGCAGCCCTGGTGCGGAAAGCGCAAGCTGACAGCTCTGCCCCCACCCCACACACCACAGATGGCACGCCCACACAGCCCTCCCAGGTGGAGTACACGGCAGACTCACCTGTGGCAGCCATGTACTACAGCTACTACATGCTGCCCGACGGCACCTACTGCCTGGCACCACCGCCCCCAGGGATCAACGTGGCCACCTACTACAGCACGCTGCCTGCCGGGGTGACCGTGTCCAGTTCCCCTGGAGTGACGACCACCGCACCACCACCCCCTGGGACCACGCCACCGCCACCACCAACCACCGCCGAGACAAGCAGTGGGGTGACCCCTACCACCACCACCACAAGTGCTCTTGCTCCTGTGGCCGCCATCATCCCCCCACCCCCCGACATTCAGCCTGTGATTGACAAGCTGGCAGAGTACGTCGCTCGGAATGGCCTTAAATTTGAGACCAGTGTTCGCGCCAAGAACGACCAGAGGTTTGAGTTCCTGCAGCCATGGCACCAATACAACACCTACTATGAGTTTAAAAAGCAGTTCTTCCTCCAGAAGGAAGGGGGCGACAGCACACAGCCTGTGTCTGCACCAGAAGAGGCCCCCTCAGACGCTGCTCCGGAGAAGCCAAGTGATGCTGGGGAGGACACTGTGCCTGAGGATGCCGCTGAGGCAGGGGGCAGAGGTGGCCCCAGTGGGAAGAAGGATGCAGCGTCCAGTAAGGGTGTGGTGGACGGGAAGCTGGTGAAAGCTTCATTTGCTCCAATAAGCTTTGCCATCAAGGCAAAAGAAAATGATCTACTTCCCCTGGAAAAAAACCGAGTTAAGCTAGATGATGACAGTGATGATGATGAAGAAAGCAAAGAAGGCCAAGAAAGTTCTAGTAGTGCTGCCAACACTAGCCCAGCTGCGGCCCCGCCCTGTGTAGTTGTCGAGGAAAAGAAGCCCCAACTTACCCAGGAGGAGCTAGAAGCAAAGCAAGCAAAGCAGAAGCTGGAGGACCGCCTCGCAGCTGCTGCCCGGGAGAAGCTTGCCCAGGCGTCCAAGGAATCAAAGGAAAAACAGCTCCAGGCAGAACGTAAAAGAAAAGCGGCTTTATTTTTACAAACCTTGAAAAATCCTCTGCCCGAAACCGAAGTTGGAAAACTTGAGGAGAGCCCTTTCAGTGTAGAGGAAGCTGGTGCCACGCCCTGTCCACTACTGAGCGGAAGCAGACCCCTGCCCACTTTAGAAGTGAAGCCACCAGAAAGGCCTTCAAGCAAAAACAGAGACCCACCGAGGGAGGAAGAAAAAGAGAAGAAGAAGAAAAAGCACAAAAAGCGGTCTCGGACTAGATCCCGCTCTCCCAAGTATCACTCGTCGTCAAAGTCCAGGTCCAGGTCCCACACGAAAGCAAAGCACTCGCTCCCCAGTGCCTACCGCACGGTGCGGCGGTCCAGGTCCCGCTCCCGGTCCCCTCGGAGGAGAGCCCACTCCCCTGAGAGACGGCGGGAGGAAAGAAGTGTCCCCACTGCCTACCGGATGAGCAGTAGCCCCGGGGCCAGCAGGAAACGAGCCCGTTCCAGAAGTCCTCACGAGAAGAAGAAGAAGAGGCGGTCGCAGTCTCGGACTAAGGCCAAGGCTCGGTCTCAGTCGGCGTCCCCAAGCAAGCGGGCAGCACAGCGGCCGGCGGCGCCCTCGGCCCACTCGGCCAGCATCTCTCCTGCGGACAGCCGGGGCTCCAGCCAGGAGCGCTCCAGGGGAGTTTCTCAGGAAAAAGAAGGTCAGATCTCTTCGGCCATCGTTTCTTCTGTGCAGAGCAAAATAACTCAGGACCTCATGGCCAAAGTCAGAGCAATGCTCGCAGCTTCCAAAAACCTGCAGACCAGCGCCTCCTGA

Related Sequences

XP_004844061.1 Protein

Sfswap PREDICTED: splicing factor, suppressor of white-apricot homolog isoform X2 [Heterocephalus glaber]

Length: 948 aa      View alignments
>XP_004844061.1
MYGAGGGRAKPERKGGAKEEAGSGGAGGGGSRVELLVFGYACKLFRDDERALAQEQGQHLIPWMGDPKILIDRYDGRGHLHDLSAYDAEYATWNRDYQLSEEEARVEALCDEERYLALHTDLLEEEARQEEEYKRLSEALAEDGNYSAVGFTYGSDYYDPSEPTEEEEPSKQREKNEAENLEENEEPFIAPLGLNVPPDVELPPTAKMHAIIERTANFVCKQGAQFEIMLKAKQARNSQFDFLRFDHYLNPYYKFIQKAMKEGRYTVLAENKNEEKKKSGTNSDNEDEDEEEDGSYLHPSLFASKKSSRLEELMKPLKVVDPDHPLAALVRKAQADSSAPTPHTTDGTPTQPSQVEYTADSPVAAMYYSYYMLPDGTYCLAPPPPGINVATYYSTLPAGVTVSSSPGVTTTAPPPPGTTPPPPPTTAETSSGVTPTTTTTSALAPVAAIIPPPPDIQPVIDKLAEYVARNGLKFETSVRAKNDQRFEFLQPWHQYNTYYEFKKQFFLQKEGGDSTQPVSAPEEAPSDAAPEKPSDAGEDTVPEDAAEAGGRGGPSGKKDAASSKGVVDGKLVKASFAPISFAIKAKENDLLPLEKNRVKLDDDSDDDEESKEGQESSSSAANTSPAAAPPCVVVEEKKPQLTQEELEAKQAKQKLEDRLAAAAREKLAQASKESKEKQLQAERKRKAALFLQTLKNPLPETEVGKLEESPFSVEEAGATPCPLLSGSRPLPTLEVKPPERPSSKNRDPPREEEKEKKKKKHKKRSRTRSRSPKYHSSSKSRSRSHTKAKHSLPSAYRTVRRSRSRSRSPRRRAHSPERRREERSVPTAYRMSSSPGASRKRARSRSPHEKKKKRRSQSRTKAKARSQSASPSKRAAQRPAAPSAHSASISPADSRGSSQERSRGVSQEKEGQISSAIVSSVQSKITQDLMAKVRAMLAASKNLQTSAS