Sequence details NCBI ID: XM_004843998.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Stx2
Gene Name syntaxin 2, transcript variant X4
Entrez Gene ID 101710896

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

STX2 ENSCPOG00000011173 (Guinea pig)

Gene Details

syntaxin 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010046, Guinea pig)

Protein Percentage 83.22%
CDS Percentage 84.85%
Ka/Ks Ratio 0.15663 (Ka = 0.1003, Ks = 0.6401)

STX2 ENSG00000111450 (Human)

Gene Details

syntaxin 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000376178, Human)

Protein Percentage 82.93%
CDS Percentage 81.07%
Ka/Ks Ratio 0.0888 (Ka = 0.093, Ks = 1.0479)

Stx2 ENSMUSG00000029428 (Mouse)

Gene Details

syntaxin 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031378, Mouse)

Protein Percentage 80.14%
CDS Percentage 79.21%
Ka/Ks Ratio 0.06168 (Ka = 0.1147, Ks = 1.8588)

Stx2 ENSRNOG00000000936 (Rat)

Gene Details

syntaxin 2 (Stx2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001242, Rat)

Protein Percentage 79.79%
CDS Percentage 80.37%
Ka/Ks Ratio 0.07936 (Ka = 0.1092, Ks = 1.3756)

Genome Location

Sequence Coding sequence

Length: 864 bp    Location: 27272586..27249003   Strand: -
Raw sequence   
>XM_004843998.1
ATGCGGGACCGGCTGCCGGACCTGACGGCGTGTAGGAAGAATGGCGATGACGACGCGATTGTGGCTGCTGAAAAGGACCACTTCATGGATGAATTCTTCCGTCAGGTGGAGGAGGTCAGAAACAGCACAGCTGAGATAGCGCAGTACGTGGAGGATGTGAAGAAGAACCACAGCATCATTCTGTCTGCACCAAACCCGGAAGGAAAAATCAAAGAAGAGCTTGAAGACCTGAACAAAGAAATCAAGAAAACTGCTAACAAAATTCGGGCCAAGTTAAAGTCCATTGAGCAAAGCTTTGATCGGGAGGAGAGCAGGAACCGGACCTCTGTGGACCTTCGCATCCGCAGAACCCAGCATTCTGTGCTGTCCTGGAAGTTCGTGGAGGTCATGACGGAGTACAACGAAGCCCAGACTCTGTTTCGGGAGCGGAGCAAAGGACGCATCCAACGCCAGCTTGAAATCACCGGAAGGACCACCACGGACGCGGAGCTGGAGGAGATGCTGGAGAGCGGGAAGCCATCCATCTTTACCTCGGACATCATCTCAGACTCATACGTCACCAGACAAGCGCTCAACGAGATCCAGTCTCGCCACAAGGACATCATGAAGCTGGAGACCAGCATCCGTGAGCTGCACGAGATGTTCGTGGACATGGCCATGTTCGTGGAGACGCAGGGTGAAATGATCAACAACATAGAGAAGAACGTGATGAACGCCACAGACTATGTGGAACACGCCAAGGAGGAGACAAAGAAAGCCATTCGGTACCAGAGCAAGGCCAGAAGGAAAATGATGTTCACTGTTACTTGCGTAATTATTTTGCTTGTGATCCTTGGAGTGATCCTCGCAGCAACGTTGTCTTAG

Related Sequences

XP_004844055.1 Protein

Stx2 PREDICTED: syntaxin-2 isoform X4 [Heterocephalus glaber]

Length: 287 aa      View alignments
>XP_004844055.1
MRDRLPDLTACRKNGDDDAIVAAEKDHFMDEFFRQVEEVRNSTAEIAQYVEDVKKNHSIILSAPNPEGKIKEELEDLNKEIKKTANKIRAKLKSIEQSFDREESRNRTSVDLRIRRTQHSVLSWKFVEVMTEYNEAQTLFRERSKGRIQRQLEITGRTTTDAELEEMLESGKPSIFTSDIISDSYVTRQALNEIQSRHKDIMKLETSIRELHEMFVDMAMFVETQGEMINNIEKNVMNATDYVEHAKEETKKAIRYQSKARRKMMFTVTCVIILLVILGVILAATLS