Details from NCBI annotation

Gene Symbol Sbno1
Gene Name strawberry notch homolog 1 (Drosophila), transcript variant X3
Entrez Gene ID 101724987

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SBNO1 ENSCPOG00000008109 (Guinea pig)

Gene Details

strawberry notch homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007292, Guinea pig)

Protein Percentage 97.99%
CDS Percentage 93.02%
Ka/Ks Ratio 0.0349 (Ka = 0.0103, Ks = 0.2965)

SBNO1 ENSG00000139697 (Human)

Gene Details

strawberry notch homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSP00000387361, Human)

Protein Percentage 97.2%
CDS Percentage 91.78%
Ka/Ks Ratio 0.0318 (Ka = 0.0127, Ks = 0.3979)

Sbno1 ENSMUSG00000038095 (Mouse)

Gene Details

sno, strawberry notch homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000066808, Mouse)

Protein Percentage 96.98%
CDS Percentage 89.18%
Ka/Ks Ratio 0.02664 (Ka = 0.0147, Ks = 0.5533)

Sbno1 ENSRNOG00000001064 (Rat)

Gene Details

sno, strawberry notch homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000054711, Rat)

Protein Percentage 97.56%
CDS Percentage 88.67%
Ka/Ks Ratio 0.01835 (Ka = 0.0113, Ks = 0.6159)

Genome Location

Sequence Coding sequence

Length: 4176 bp    Location: 23275958..23219309   Strand: -
>XM_004843945.1
ATGGTGGAACCGGGGCAAGATTTGCTACTTGCTGCTTTGAGTGAGAGTGGAATTAGTCCGAATGACCTCTTTGATATTGATGGAGATGTGGGCCTTGCAACTCCAACCCCAACACCTGCACTTCAGCAGTCGGTGCCATTTGGTGCATTAGAACTAGGTTTGGAGGCAGAAGCTGCAGTTACTGTTAAACAAGAAACAGAAACGGTACCCACTCCTGCGCTGTTAAATGTGAGGCAGCCTCCATCGACTACAACATTTGTGTTGAATCAAATAAATCAACTTCCAACCCTGGGATCTACAATTGTAATGACTAAAACACCACCTGTAACAACTAACAGGCAGACCATCACTTTAACAAAATTTATCCAGACTACTGCAAACACCCGCCCTTCAGTGTCAGCACCAGCAGTGCGGAACACTGTGACCACTGCACCTTCAAAAGACCAGGTTCAGCTAAAGGATCTACTAAAAAATAATAGTCTGAATGAACTCATGAAGCTGAAGCCACCTGCTAATATTGTTCAGCCAGTTGCAACAGCAGCTACTGATGTAAGCAATGGTACAGTGAAGAAGGAGTCTTCTAATAAAGAAGTGGCAAGAATATGGATAAATGACATGAAAATGAGGAGTTTTTCCCCAACCATGAAGGTTCCGGTTGTAAAAGAGGAAGATGAACCAGAGGAGGAAGATGAAGAAGAAATGGGCCATGCTGAAACCTATGCAGAGTATATGCCAATAAAATTAAAAATTGGCCTGCGTCATCCAGATGCTGTAGTGGAAACTAGTTCTTTATCCAGTGTCACTCCTCCTGATGTTTGGTATAAAACATCCATCTCTGAAGAAACCATCGACAGTGGCTGGTTATCAGCATTACAGCTTGAGGCAATTACATATGCAGCTCAGCAACATGAAACATTCCTACCTAATGGAGATCGTGCTGGCTTCTTAATAGGTGATGGTGCTGGTGTAGGGAAAGGCAGGACAATAGCAGGAATCATCTATGAAAATTATTTGTTGAGTAGAAAGAGAGCATTGTGGTTTAGTGTTTCCAATGACTTAAAGTATGATGCTGAAAGAGATTTGAGGGATATTGGAGCAAAAAACATTTTGGTCCACTCATTAAATAAGTTTAAATATGGAAAAATTTCTTCCAAACATAACGGGAGTGTGAAAAAGGGCGTGATTTTTGCTACGTATTCCTCCCTTATTGGTGAAAGCCAGTCTGGTGGTAAATATAAAACTAGATTAAAACAACTTCTGCATTGGTGTGGTGATGACTTCGATGGAGTGATAGTGTTTGATGAATGTCATAAAGCAAAAAACTTATGTCCTGTTGGTTCTTCAAAACCCACGAAGACAGGCTTAGCAGTTTTGGAGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTTTATGCAAGTGCCACTGGTGCTTCGGAACCACGCAACATGGCCTATATGAACCGCCTTGGAATCTGGGGTGAGGGGACTCCATTTAGAGAATTCAGTGATTTCATTCAAGCAGTGGAGCGCAGAGGTGTCGGTGCTATGGAAATAGTTGCTATGGATATGAAGCTCAGAGGAATGTATATTGCCCGACAGCTGAGTTTTACTGGAGTGACCTTCAAAATTGAGGAAGTTCTTCTTTCTCAGAACTATGTTAAAATGTATAACAAAGCAGTGAAGCTGTGGGTCATCGCCAGAGAGCGGTTTCAGCAGGCTGCGGACCTGATTGATGCTGAGCAACGAATGAAGAAGTCCATGTGGGGTCAGTTTTGGTCTGCACACCAGAGGTTTTTCAAGTACTTGTGCATAGCATCCAAAGTTAAGAGGGTTGTGCAGCTAGCCCGGGAGGAAATCAAGAATGGAAAATGTGTTGTAATTGGTCTGCAGTCTACAGGAGAAGCTAGAACATTAGAAGCTTTGGAAGAGGGTGGAGGAGAATTGAATGATTTTGTTTCAACTGCCAAAGGAGTGTTGCAGTCACTCATTGAAAAACACTTCCCTGCTCCAGACAGGAAAAAACTGTATAGTTTGCTGGGAATCGATCTGACAGCTCCAAGTAACAACAGTTCACCAAGAGATAGCCCTTCTAAAGAAAATAAAATGAAGAAACGGAAAGGTGAAGAAATAACTCGAGAAGCCAAAAAAGCACGAAAAGTTGGTGGCCTCGCAGGTAGCAGTTCTGATGACAGTGGAAGTGAGTCTGATGCCTCTGACATTGAAGAAAGTGACTACGAGAGCTCTAAAAACATGAGCTCCGGTGATGACGATGATTTCAACCCCTTTCGAGACGAATCTAGTGAGGGTGATGAAGATGATCCTTGGTTAATCAGAAAAGACCATAAGAAAAACAAAGATAAAAGAAAGAAGAAAAGTATAGATCCAGATTCTATTCAAAGTGCCTTATTAGCATCAGGTCTCGGATCAAAACGACCTAGTTTTTCATCTACACCAGTTATCTCACCTGCTCCTAATAGTGCACCAGCTAATAGTAACGCCAGCAGTAACAGCAGCCTTATAACAAGTCAGGATGCTGTGGAGAGGGCCCAGCAGATGAAGAAAGACCTACTTGAGAAACTGGAAAAGTTAGCTGAAGATCTCCCTCCAAATACCCTGGATGAACTTATTGATGAGCTGGGTGGCCCTGAGAATGTGGCTGAGATGACTGGCCGAAAAGGGCGGGTTGTGAGCAACGACGATGGAAGCATATCTTACGAGTCAAGATCTGAACTTGATGTGCCAGTGGAAATACTAAACATTACAGAAAAACAAAGGTTTATGGATGGCGATAAGAATATTGCTATCATCTCAGAAGCTGCCAGCTCGGGTATTTCCTTACAAGCAGATCGCAGAGCTAAAAATCAAAGGCGAAGAGTTCATATGACTCTGGAATTACCCTGGAGCGCTGATAGAGCAATTCAACAATTTGGAAGAACTCACAGATCAAACCAAGTGACTGCTCCCGAGTATGTCTTTCTGATTTCTGAACTGGCGGGAGAACAAAGATTTGCCTCCATTGTTGCCAAAAGACTTGAGAGCCTGGGGGCGCTTACACATGGTGACAGAAGAGCAACAGAATCTCGAGATCTGAGCAGATTCAACTTTGACAATAAGTATGGAAGAAATGCTTTAGAAATTGTTATGAAATCCATTGTAAATTTGGATTCTCCTATGGTATCACCACCTCCAGACTATCCTGGAGAATTCTTCAAAGATGTTCGACAAGGACTGATAGGTGTAGGCCTGATAAATGTGGAAGATCGCTCAGGAATTCTTACTCTTGATAAAGATTATAACAACATAGGAAAGTTCTTAAATAGAATTCTGGGCATGGAAGTGCATCAACAAAATGCGTTATTTCAGTATTTTGCGGACACACTTACTGCAGTTGTTCAGAATGCCAAAAAAAATGGACGATATGACATGGGAATCCTAGATCTTGGTTCTGGAGATGAGAAGGTGAGGAAAAGCGATGTTAAGAAGTTTCTGACTCCGGGGTATTCGACCTCTGGCCATGTAGAGTTGTACACTATCAGTGTAGAGAGGGGGATGTCCTGGGAGGAAGCGACCAAGATCTGGGCTGAGCTGACAGGACCAGATGATGGCTTCTACTTGTCATTGCAAATAAGGAACAACAAGAAAACTGCCATCTTAGTTAAAGAAGTAAACCCTAAAAAGAAACTTTTCTTAGTTTATCGACCAAATACTGGGAAACAGCTCAAATTAGAAATTTATGCTGATCTCAAAAAGAAGTATAAGAAGGTAGTCTCAGATGATGCCTTTGTGCACTGGTTAGACCAGTATAATTCATCCGCAGATACTTGTACTCATGCTTATTGGCGTGGCAATTGCAAAAAAGCAAGCTTGGGATTAGTCTGTGAGATTGGTCTTCGCTGCCGCACATATTACGTCTTATGCGGCTCTGTCCTGAGTGTGTGGACAAAAGTGGAGGGTGTGCTTGCCTCTGTCAGCGGCACGAATGTGAAAATGCAGATTGTTCGGCTAAGGACAGAAGATGGACAACGGATTGTAGGCTTGATCATTCCGGCAAATTGTGTGTCTCCTCTCGTAAATCTCCTGTCAACGTCAGACCAGTCTCAGCAGCTTGCGGTCCAGCAGAAACAGCTGTGGCAGCAGCATCACCCACAGAGCATCGCCAACCTGAGCAACGCCTGA

Related Sequences

XP_004844002.1 Protein

Sbno1 PREDICTED: protein strawberry notch homolog 1 isoform X3 [Heterocephalus glaber]

Length: 1391 aa      View alignments
>XP_004844002.1
MVEPGQDLLLAALSESGISPNDLFDIDGDVGLATPTPTPALQQSVPFGALELGLEAEAAVTVKQETETVPTPALLNVRQPPSTTTFVLNQINQLPTLGSTIVMTKTPPVTTNRQTITLTKFIQTTANTRPSVSAPAVRNTVTTAPSKDQVQLKDLLKNNSLNELMKLKPPANIVQPVATAATDVSNGTVKKESSNKEVARIWINDMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDSGWLSALQLEAITYAAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGVTFKIEEVLLSQNYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQSLIEKHFPAPDRKKLYSLLGIDLTAPSNNSSPRDSPSKENKMKKRKGEEITREAKKARKVGGLAGSSSDDSGSESDASDIEESDYESSKNMSSGDDDDFNPFRDESSEGDEDDPWLIRKDHKKNKDKRKKKSIDPDSIQSALLASGLGSKRPSFSSTPVISPAPNSAPANSNASSNSSLITSQDAVERAQQMKKDLLEKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHGDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLIGVGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNGRYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTGPDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVSDDAFVHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQKQLWQQHHPQSIANLSNA