Sequence details NCBI ID: XM_004843906.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Hip1r
Gene Name huntingtin interacting protein 1 related
Entrez Gene ID 101714826

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HIP1R ENSCPOG00000007153 (Guinea pig)

Gene Details

huntingtin interacting protein 1 related

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006450, Guinea pig)

Protein Percentage 90.45%
CDS Percentage 89.96%
Ka/Ks Ratio 0.07743 (Ka = 0.0472, Ks = 0.6095)

HIP1R ENSG00000130787 (Human)

Gene Details

huntingtin interacting protein 1 related

External Links

Gene Match (Ensembl Protein ID: ENSP00000253083, Human)

Protein Percentage 88.74%
CDS Percentage 87.43%
Ka/Ks Ratio 0.06053 (Ka = 0.0566, Ks = 0.9355)

Hip1r ENSMUSG00000000915 (Mouse)

Gene Details

huntingtin interacting protein 1 related

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000000939, Mouse)

Protein Percentage 88.37%
CDS Percentage 84.9%
Ka/Ks Ratio 0.05076 (Ka = 0.0629, Ks = 1.2391)

Hip1r ENSRNOG00000001091 (Rat)

Gene Details

huntingtin interacting protein 1 related (Hip1r), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000029635, Rat)

Protein Percentage 89.31%
CDS Percentage 85.58%
Ka/Ks Ratio 0.05155 (Ka = 0.0583, Ks = 1.1311)

Genome Location

Sequence Coding sequence

Length: 3201 bp    Location: 22876208..22897554   Strand: +
Raw sequence   
>XM_004843906.1
ATGAACAGCATCAAGAGCGTGCCGGCGCGGGTGCTGAACCGCAGGCCGGCGCACAGCCTGGAGGCCGAGCGCGAGCAGTTCGACAAGACCCAGGCCATCAGCATCAGCAAAGCCATCAACAGCCAGGAGGCCCCCGTGAAGGAGAAGCATGCCCGGCGCATCATCCTGGGCACGCACCATGAGAAGGGGGCCTTCACCTTCTGGTCCTACGCCATTGGCCTGCCGCTGCCCAGCAGCTCCATCCTCAGCTGGAAGTTCTGCCACGTGCTGCACAAGGTCCTGCGGGACGGCCATGCCAATGTGCTGCACGACTGCCAGCGCTACCGGAGCAACATCCGGGAGATAGGGGACCTGTGGGGCCACTTGCATGACCGCTACGGGCAGCTGGTGAATGTCTACACCAAACTCCTGCTCACCAAAATCTCCTTCCACCTCAAGCACCCCCAGTTTCCTGCGGGCCTGGAGGTGACAGATGAGGTGCTGGAGAAGGCGGCCGGGACCGACGTCAACAATATCTTCCAGCTCACCGTGGAGATGTTCGACTACATGGACTGCGAGCTGAAGCTGTCGGAATCGGTCTTCCGGCAGCTGAACACGGCCATTGCTGTGTCCCAGATGTCCTCAGGCCAGTGCCGCCTGGCCCCGCTCATCCAGGTCATCCAGGACTGCAGCCACCTCTACCACTACACGGTCAAGCTGCTGTTCAAGCTGCACTCCTGTCTCCCAGCGGACACCCTGCAGGGCCACCGGGACCGGTTCCACGAGCAGTTCCACAGCCTCCGGAACTTCTTCCGCAGAGCCTCGGACATGATCTACTTCAAGCGGCTCATCCAGATTCCCCGGCTGCCTGAGAGTCCCCCCAACTTTCTGCGGGCCTCAGCCCTGGCTGAGCACATCAAGCCCGTGGTGGTGATCCCCGAGGAGGCCCCGGAGGATGAGGAGCCCGAGAACCTCATCGAGATCAGCACTGGGCCTCCTGCCGGGGAGCCTGTGGTGGTAGCCGACCTCTTGGATCAGACCTTTGGACCCCCCAACGGCTCCATGAAGGCTGACAGGGACCTCCAGGTGGAGAGTCTGAAGAGGGAGGTGGAGCTGCTCCGCGCTGAGCTGGAGAAGACCAAGCTGGAGGCCCGGCGGTACGTGGCGCAGCTGAAGGGCCAGGTGAATGCCCTGGAGGCTGAGCTGGAAGAGCAGCGCACGCAGAAGCAGAAGGCGCTGGTGGACAACGAGCAGCTCCGGCACGAGCTGACCCAGCTGCGGGCCGTGCAGCAGGAGGGCGTGCGGAGCCAGGGCCTGCTGCGGGAGGCCGAGAGGAAGGCGAGCGCCACCGAGGCGCGCTACAGCAGGCTGAAGGAGAAGCATGGCGAGCTGGTCAGCACGCACGCCACGCTCCTCAGGAAGAACGCAGACACTGCCAAGCAGCTGACGGTGACGCAGCAGAGCCAGGAGGAGGTGGCGCGGGTGAAGGAGCAACTGGCCTTCCAGATGGAGCAGGTGAAGCGGGAGTCCGAGATGAAGCTGGAGGAGCAGAGTGACCAGCTGGAGAGGCTCAAGAGGGAGCTGGAGGCCAAGGCTGGCGAACTGGCACACATGCAGGAGGCCCTGAGCCGCGCAGAGCAGAGTGGGTCGGAGCTGAGCTCAAGGCTGGATGCGCTGAGTGCTGAGAAGGATGTGCTGAGCATCACCATGAGGCAGCAAGAAGCCGAGCTGCTGGCTGCCCAGGACCTGGCTCGGGAGAAGGAGGTGGTGCTGAGCCAGGAACAGCAGCGCAGCTCCCGGGAGAGGACCGAGCTGCAGGGGCAGCTGGCAGAGAAGGAGTCCCAGGAGCAGGGGCTGCAGCAGAGGCTGCTGGATGAGCAGTTCGCAATGGTGCGGGGCACTGCCACCGAGGCCAGGGCCATCCTGCAGGATGCCGTGAGCTTGCTGGATGACCCCCTTCACCTGCGCTGCACCAGCTCCCCAGCCTATCTGGTGAGCCGGGCTCAGGTGGCCCTGGACTCCGTGAGTGCCCTGGAGAAGGGGCACGCGCAGTACCTGGCCTCCCCGGAGGATGCCTCTGCCCTGGTGGCGGCCCTGACCCGGTTTTCCCACCTGGCTGCGGACGCCATCATTAATGGAGGCGCCACCTCCCACCTGGCTCCCACTGACCCTGCGGACCGCCTGATGGATGCCTGCAGGGAGTGCGGGGCTCGGGCGCTGGAGCTCACAGGGCAGCTGCAGGAGTGGCAGGTGCTGCCACAGGCACAGCCAGGCCTGTTGCGGTTCCCTCTGCAGGGCATCCTCCAGCTGGGCCAGGAGCTGAAGCCCAAGAGCCTGGATGTACGGCAGGAGGAACTGGGGGCCATGGTGGATAAGGAGATGGCAGCTACATCCGCAGCCATTGAGGATGCTGTGCGGAGGATTGAGGACATGATGAACCAGGCCCGCCACGCGAGCTCGGGGCTGAAGCTGGAGGTGAATGAGAGGATCCTCAACTCCTGCACCGAACTGATGAAGGCCATCCGGCTCCTGGTAACGACCTCCACCAGCCTGCAGAAGGAAATTGTGGACAGCGGCAGGGGGGCAGCCACACAGCAGGAATTCTACGCCAAGAACTCACGGTGGACAGAAGGCCTCATCTCGGCCTCCAAGGCCGTGGGCTGGGGAGCGTCGCAGCTGGTGGAGTCAGCGGACAGGGTGGTGCTGCACACCGGCAAGTATGAGGAGCTCATCGTCTGCTGCCACGAGATTGCAGGCAGCACTGCGCAGCTGGTGGCCGCCTCCAAGGTGAAGGCTGACAAGCACAGCCCGTGCCTCAGCCGCCTGCAGGAGTGTTCCCGTGCTGTCAACGAGAGGGCCGCCGGCGTGGTGGCCTCCACCAAATCAGGCCAGGAGCAGATCGAAGACCGAGACACCATGGACTTCTCTGGCCTGTCCCTCATCAAGCTGAAGAAGCAGGAGATGGAGACGCAGGTGCGGGTGCTGGAACTGGAGAAGACGCTGGAGGCGGAGCGTGTGCGGCTCGGGGAGCTGCGGAAGCAGCACTATGTGCTGGCCGGGGGTGTGGGGACCCCTGAAGAGGAGCCCAGCCGGCCCACCATGGCCCCTCGAGGGGCCACCAAGAAGCCACCCCTGGCGCAGAAGCCCATCGTGGCACCCAGACAGGACCCACAGCTGGATGGCAAGGATGGCACCGGCCCCACTCAGCTCGTGAGCTCCTAG

Related Sequences

XP_004843963.1 Protein

Hip1r PREDICTED: huntingtin-interacting protein 1-related protein [Heterocephalus glaber]

Length: 1066 aa      View alignments
>XP_004843963.1
MNSIKSVPARVLNRRPAHSLEAEREQFDKTQAISISKAINSQEAPVKEKHARRIILGTHHEKGAFTFWSYAIGLPLPSSSILSWKFCHVLHKVLRDGHANVLHDCQRYRSNIREIGDLWGHLHDRYGQLVNVYTKLLLTKISFHLKHPQFPAGLEVTDEVLEKAAGTDVNNIFQLTVEMFDYMDCELKLSESVFRQLNTAIAVSQMSSGQCRLAPLIQVIQDCSHLYHYTVKLLFKLHSCLPADTLQGHRDRFHEQFHSLRNFFRRASDMIYFKRLIQIPRLPESPPNFLRASALAEHIKPVVVIPEEAPEDEEPENLIEISTGPPAGEPVVVADLLDQTFGPPNGSMKADRDLQVESLKREVELLRAELEKTKLEARRYVAQLKGQVNALEAELEEQRTQKQKALVDNEQLRHELTQLRAVQQEGVRSQGLLREAERKASATEARYSRLKEKHGELVSTHATLLRKNADTAKQLTVTQQSQEEVARVKEQLAFQMEQVKRESEMKLEEQSDQLERLKRELEAKAGELAHMQEALSRAEQSGSELSSRLDALSAEKDVLSITMRQQEAELLAAQDLAREKEVVLSQEQQRSSRERTELQGQLAEKESQEQGLQQRLLDEQFAMVRGTATEARAILQDAVSLLDDPLHLRCTSSPAYLVSRAQVALDSVSALEKGHAQYLASPEDASALVAALTRFSHLAADAIINGGATSHLAPTDPADRLMDACRECGARALELTGQLQEWQVLPQAQPGLLRFPLQGILQLGQELKPKSLDVRQEELGAMVDKEMAATSAAIEDAVRRIEDMMNQARHASSGLKLEVNERILNSCTELMKAIRLLVTTSTSLQKEIVDSGRGAATQQEFYAKNSRWTEGLISASKAVGWGASQLVESADRVVLHTGKYEELIVCCHEIAGSTAQLVAASKVKADKHSPCLSRLQECSRAVNERAAGVVASTKSGQEQIEDRDTMDFSGLSLIKLKKQEMETQVRVLELEKTLEAERVRLGELRKQHYVLAGGVGTPEEEPSRPTMAPRGATKKPPLAQKPIVAPRQDPQLDGKDGTGPTQLVSS