Details from NCBI annotation

Gene Symbol Lrrc43
Gene Name leucine rich repeat containing 43
Entrez Gene ID 101707796

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC43 ENSCPOG00000006930 (Guinea pig)

Gene Details

leucine rich repeat containing 43

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006251, Guinea pig)

Protein Percentage 76.21%
CDS Percentage 82.26%
Ka/Ks Ratio 0.18786 (Ka = 0.1408, Ks = 0.7497)

LRRC43 ENSG00000158113 (Human)

Gene Details

leucine rich repeat containing 43

External Links

Gene Match (Ensembl Protein ID: ENSP00000344233, Human)

Protein Percentage 71.09%
CDS Percentage 76.46%
Ka/Ks Ratio 0.13972 (Ka = 0.1823, Ks = 1.3044)

Lrrc43 ENSMUSG00000063409 (Mouse)

Gene Details

leucine rich repeat containing 43

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000091885, Mouse)

Protein Percentage 65.47%
CDS Percentage 71.44%
Ka/Ks Ratio 0.14019 (Ka = 0.2424, Ks = 1.7294)

Lrrc43 ENSRNOG00000008470 (Rat)

Gene Details

leucine rich repeat containing 43

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011240, Rat)

Protein Percentage 63.9%
CDS Percentage 69.32%
Ka/Ks Ratio 0.12846 (Ka = 0.2638, Ks = 2.0533)

Genome Location

Sequence Coding sequence

Length: 1905 bp    Location: 22425491..22439323   Strand: +
>XM_004843884.1
ATGGCGGCCAGCGCTGGGAGCGAGAGCGCGCCCGGCACCGTGAGCTCGGCTGTGAAAGAGCACCTGCGGCAGCTGTGTCTGTGCGAGTTCCCGTGCGGCACCGGCAGCTGGAACAGATCCCGCTTCCTTCCGCCCACTCGGCGAGCCTGGAAGAAGCTGGTGCCTGGGGAGGAGGCAGCCGTGGGCCCTGGGGAGGAGCTGGTGGAGGCCCTGCTGGACCTGGTGCGCAGTCCTCAGTCGCTTTGGGCTCTGCCCGAGGACTCCAGTGCTGAGGACCGCTTTCTGCGAGAGCTGGCCATCCAGAGCCCGCTGATGATCAGAGACACCTTCTTCTACTCCTACTTCCGGTCCCTGCGGGTAGTGGGCAAGCAGGTGAGCCAGGTGGGTGGAGACCTCCTGAAGTTCCTGAAGCTGGAGGAGCTGGTCCTGAGCGCCAACCGGATCAAGGAAGTCGATGCCGCCAACCTGCCCCCCATGCTCAAGGTGCTGGAGCTGTACGGCAACGAGCTGAGCAGCACGGAGTGTCTGTGTGCACACCCGCCACCCGGCCTGCAGCACCTGGGGCTGGGCCAGAATCAGCTGCGCAGCCCCTCAGAGAGCCGCTACCTCACCGCCAGCCACTGGCCCAACCTCGTCTCCCTGGACCTGGGCTTCAACGACCTGACCGACCTGCGGGCCATGGTGGCCGCGCTGCGCTCGCTGGGCCGCCTCCGGCTGCTGGTGCTGCAGGGGAACCCGCTGGCGCTGCTGCCGCACTACCGCGGCTTCACCGTGGACAGCCTGGCTCGGCTCTGCGTGCTGGACGACGTCACCGTGTCCCCGCACGAGCGGCACCAGTTCCGCGGGCTGGGCCAGCAAGGCGACCTCTTGCCGCAGGACGCGCAGCTGGTGGTGACCGTCGGGAACATCAGGGGAGTCGTGGACTCCTCTGTCTTGGACCCCGAGCCCGGGCCCAAAGGCCCCTTTGTGGCCTACAGCTACTACGTGACCTACGACTTCCTGGGAGGGGAGGACGGCGAGGCCAGCGAGCACGGCGGGGTCCTGGCCGAGGTGGTGAAGCCTCGGTCCAGCGCCCAGCTGCTCGGGGAGGAGCTCGCTGAGGACTTGGCCGAGGAGTCCCTGGCGTCGGTGGAAACCACGGAGCAGAAGTCCGAGTCCTCCGTGGTCTCAGGCTGCTCGGCCGCCCGGCCGCCATTCTCAGCCTCCGGGGAGGAGCTGGGCAAGCTGAGGCCGCGCATGGACCCCCGGCTGTGCCCCTCCCCGGGGACAGTCCCCTTCAGCACGGACCACAAGCCTTGGGCCAACGTCATCGCCTGCAACTACGAGGCGCAACACAGCATCAGGGATCTGGGGCTGCTCAAGGGCTTCCTGCTGGCCGGGACCACAGTGACCATCATGGAGGAGAAGATCCTCTCTTGGCCTGTGGTGACCCCTCCCGTTGACAGTCCCCAGGGAGCCAAGAAAGGAAAGGGAGAGGATGACAAGAAGAAGAAGGAAAAAGACAGGAAAGACTGGAAAGGGAAAGCAGAGGAGCCCCCTCAGGAAAGGAAGGCGTCGCACAAGAAGAGAGAGGCCCCCAAGGAACTGTGCCAGGACCCTCCCACACTGCAGGCTCTCGGCAGCGGCCTGGTGGCCCTGGAGCCCCTGCTGGCCGGGGAGGCTGTAGTGTCTACTGTGTGCAACTTTGGGGTGATCCGCACCCCGGAATCAGACCGGCTGACGTTTGCCAGGGACTCAAAGATTAAGAAAGGTGCCAAGAAAGAAAAGACGAAATCAGCGGCTCCGATCTTCGAAAGCGACTACCAGCCGGAGCAGCTGACCGTGGAGGTCGAGATCCAGCTGGGCCAGGTCCGCTCGGTGGAGGAGGCGCTGCGCGCTGTCGCCAACCAGGCGCGGGCAGAGTAA

Related Sequences

XP_004843941.1 Protein

Lrrc43 PREDICTED: leucine-rich repeat-containing protein 43 [Heterocephalus glaber]

Length: 634 aa      View alignments
>XP_004843941.1
MAASAGSESAPGTVSSAVKEHLRQLCLCEFPCGTGSWNRSRFLPPTRRAWKKLVPGEEAAVGPGEELVEALLDLVRSPQSLWALPEDSSAEDRFLRELAIQSPLMIRDTFFYSYFRSLRVVGKQVSQVGGDLLKFLKLEELVLSANRIKEVDAANLPPMLKVLELYGNELSSTECLCAHPPPGLQHLGLGQNQLRSPSESRYLTASHWPNLVSLDLGFNDLTDLRAMVAALRSLGRLRLLVLQGNPLALLPHYRGFTVDSLARLCVLDDVTVSPHERHQFRGLGQQGDLLPQDAQLVVTVGNIRGVVDSSVLDPEPGPKGPFVAYSYYVTYDFLGGEDGEASEHGGVLAEVVKPRSSAQLLGEELAEDLAEESLASVETTEQKSESSVVSGCSAARPPFSASGEELGKLRPRMDPRLCPSPGTVPFSTDHKPWANVIACNYEAQHSIRDLGLLKGFLLAGTTVTIMEEKILSWPVVTPPVDSPQGAKKGKGEDDKKKKEKDRKDWKGKAEEPPQERKASHKKREAPKELCQDPPTLQALGSGLVALEPLLAGEAVVSTVCNFGVIRTPESDRLTFARDSKIKKGAKKEKTKSAAPIFESDYQPEQLTVEVEIQLGQVRSVEEALRAVANQARAE