Details from NCBI annotation

Gene Symbol Kdm2b
Gene Name lysine (K)-specific demethylase 2B, transcript variant X5
Entrez Gene ID 101696346

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

KDM2B ENSCPOG00000011011 (Guinea pig)

Gene Details

lysine (K)-specific demethylase 2B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009897, Guinea pig)

Protein Percentage 95.5%
CDS Percentage 91.72%
Ka/Ks Ratio 0.03927 (Ka = 0.021, Ks = 0.5351)

KDM2B ENSG00000089094 (Human)

Gene Details

lysine (K)-specific demethylase 2B

External Links

Gene Match (Ensembl Protein ID: ENSP00000366271, Human)

Protein Percentage 92.76%
CDS Percentage 89.42%
Ka/Ks Ratio 0.06964 (Ka = 0.0402, Ks = 0.5775)

Kdm2b ENSMUSG00000029475 (Mouse)

Gene Details

lysine (K)-specific demethylase 2B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000038229, Mouse)

Protein Percentage 93.77%
CDS Percentage 87.8%
Ka/Ks Ratio 0.04237 (Ka = 0.031, Ks = 0.7327)

KDM2B ENSRNOG00000025702 (Rat)

Gene Details

lysine-specific demethylase 2B

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000050408, Rat)

Protein Percentage 92.98%
CDS Percentage 87.79%
Ka/Ks Ratio 0.05807 (Ka = 0.0394, Ks = 0.6788)

Genome Location

Sequence Coding sequence

Length: 3918 bp    Location: 22046024..21922249   Strand: -
>XM_004843850.1
ATGGGAGCTTTGTGGCGGGCCGTCTGCCTCTCCCCCTCCCAAGCCCCAGACCTCCTCCTCTCACCTTCTCTTCTTGAACTGGCGGTCGGTCGGCGGGGGCGGCTGGGGACTCAGCCCTTCCATTTCAGCTTTCCAGCTTCTCCGCGTCCGATTGACCGCCAGAGATACGACGAGAACGAGGACTTGTCGGACGTGGAAGAGATCGTCAGCGTCCGCGGCTTCAGCCTGGAGGAGAAGCTGCGCAGCCAGCTGTACCAGGGGGACTTCGTGCACGCCATGGAGGGCAAAGATTTCAACTATGAGTACGTACAGAGAGAAGCTCTCAGGGTACCCCTGATATTTCGAGAAAAGGACGGACTAGGAATTAAGATGCCTGACCCTGATTTCACAGTTCGGGACGTCAAGCTCCTCGTGGGGAGCCGGCGACTGGTGGACGTGATGGACGTGAACACCCAGAAGGGCACGGAGATGAGCATGTCCCAGTTCGTGCGCTATTACGAGACGCCCGAGGCCCAGCGGGACAAGCTGTACAACGTCATCAGCCTGGAGTTTAGCCACACCAAGCTGGAGCACCTGGTCAAGCGTCCCACCGTGGTGGATCTGGTGGACTGGGTCGACAACATGTGGCCCCAACACCTGAAGGAGAAGCAGACTGAGGCCACCAATGCCATTGCAGAGATGAAGTACCCCAAAGTGAAGAAGTACTGTCTGATGAGTGTGAAGGGCTGTTTCACTGACTTCCACATCGACTTCGGAGGCACTTCTGTGTGGTACCATGTGTTCCGGGGAGGGAAGATCTTTTGGCTGATCCCACCGACCCTGCACAATTTGGCTCTGTATGAGGAGTGGGTGCTGTCAGGCAAGCAGAGTGACATCTTTCTGGGAGACCGTGTGGAGCGATGCCAAAGAATTGAACTGAAACAGGGCTACACATTTTTCATCCCTTCTGGTTGGATCCATGCAGTCTACACCCCTGTAGACTCCCTGGTGTTCGGTGGAAACATCCTGCACAGCTTTAACGTGCCCATGCAGCTGCAGATCTACGAGATCGAGGACAGAACCCGGGTGCAGCCCAAGTTCCGGTACCCCTTCTACTATGAGATGTGCTGGTATGTCCTGGAGAGATACGTGTACTGCGTGACCCAGCGCTCCTACCTCACTCAGGAGTACCAGAGAGAGTCCATGCTCATTGATGCCCCACGGAAGGCCAGTGTAGACGGCTTCTCGTCCGATTCCTGGCTGGAGATGGAGGAGGAGTCCTGTGAGCAGCAGCCCCAGGAGGAGGAGGGGGAGAAGGAGGAGGAGGGGGATGGCTTGGAGAAGGCGCCCAAGCCTTGCCCTGATGGCCCTGCCTCGCCCGGCGGCACCCCGTCCGAGGAGCAGGAGACCCCAGGGAAGAAGCCCAAGGCACCCGCCACGCACTTCTTCAAAAGGACTTTGTCGAACGAGTCGGAGGACAGCGTCAAGTCGGCCACCGTGCCCGGCGACTACCCGAAGACGCCCACTGGCTCGCCCGCCACTGAGGTGTCTGCCAAGTGGACCCACCTCACCGAGTTTGAGCTGAAGGGGCTGAAGGCCCTGGTGGAGAAGCTCGAGTCCCTCCCTGAGAACAAGAAGTGTGTCCCTGAGGGCATCGAGGACCCCCAGGCACTCCTGGAGGGCGTGAAGAATGTCCTGAAGGAACATGCAGAGGATGACCCCAGCCTGGCCGTTACTGGAGTCCCTGTGGTCAGTTGGCCAAAGAAGACTCCAAAGAACCGGGCAGTGGGTCGGCCCAAGGGGAAGCTGGGCCCATCCTCCACAGTGAAATTGGCTGCCAACCGAACGACAGCAGGAGCTCGCAGGCGCCGGACGAGATGCCGCAAGTGCGAGGCGTGCCTGAGGACAGAGTGTGGAGAGTGCCACTTCTGCAAGGACATGAAGAAGTTCGGGGGCCCCGGGCGGATGAAGCAGAGCTGCATCATGCGGCAGTGCATTGCGCCAGTGCTGCCCCATACCGCTGTGTGCCTTGTGTGTGGCGAGGCAGGGAAGGAGGACACAGTGGAAGAGGAGGAAGGCAAGTTCAACCTCATGCTCATGGAGTGCTCCATCTGCAATGAGATCATCCACCCTGGCTGCCTTAAGATTAAGGAGTCAGAGGGTGTGGTCAACGACGAGCTTCCAAACTGCTGGGAGTGTCCGAAGTGCAACCACGCTGGCAAGACCGGGAAACAAAAGCGTGGCCCTGGCTTTAAGTATGCCTCCAACCTGCCCGGCTCCCTGCTCAAGGAGCAGAAGATGAACCGGGACAACAAGGAAGGGCAGGAGCCTGCCAAGCGGAGGAGTGAGTGTGAGGAGGCGCCCAGGCGCAGGTCGGACGAGCACCCCAAGAAGGTGCCGGTGGACAGCATCCTGCGCCGAAAGTCGGATGATGTGCACCTGAGGAGGAAGCGGAAATATGAGAAGCCCCAGGAGCTGAGTGCACGCAAGCGACTAAAGCCTGGCAAAGAAGATAAGCTTTTCAGGAAGAAGCGGAGGTCCTGGAAGAACGCTGAGGACCGGATGCCACTGGCTACGAAGCCCCTGCGGCGCTTCAAGCAGGAGCCAGAGGATGATTTGCCTGAGGCGCCCCCCAAAAGCAGGGACAGTGACCACTCACGCTCTAGCTCGCCCACCGCAGGGCCCAGCACGGAGGGGGCCGAGGGCTCGGAGGAAAAGAAGAAAGTGAAGATGCGCCGGAAACGGCGGCTTCCCAATAAGGAGCTGAGCAAGGAGCTGAGCAAGGAGCTCAACCATGAGATCCAGAAAACAGAGAGCAGCCTGGCCCATGAGAACCACCAGCCCATCAAGTCAGAGCCCGAGAGCGAGAATGAGGAGCCCAAGCGGCCGCTGGGCCACTGTGAGCGGCCCCACCGCTTCAGCAAGGGGCTCAACGGCACCCCCCGGGAGTTGCGGCACCCGCTGGGCCACGGCCTGCGCAGCCCGCCCCGGGTCATCTCCCGGCCCCCACCCTCTGTGTCCCCGCCCAAGTGCATCCAGATGGAGCGCCACGTGATCCGCCCGCCCCCCATCAGCCCCCCACCTGACTCGCTGCCCCTGGACGATGGGGCGGCCCACGTCATGCACAGGGAGGTGTGGATGGCCGTCTTCAGCTACCTCAGCCACCAAGACCTGTGTGTCTGCATGCGGGTCTGCAGGACCTGGAACCGCTGGTGCTGTGATAAGCGGTTGTGGACCCGCATCGACCTGAACCACTGCAAGTCCATCACGCCCTTGATGCTCAGTGGCATCATTCGGCGCCAGCCCGCCTCCCTTGACCTCAGCTGGACCAACATTTCTAAGAAGCAGCTGAGCTGGCTCATCAACCGCCTGCCTGGGCTCCGAGACTTGGTGCTGGCAGGCTGCTCCTGGATCGCAGTCTCTGCGCTCTGTAGCTCCAGTTGTCCGCTGCTCCGGACCCTGGATGTCCAGTGGGTAGAAGGGCTCAAGGACGCCCAGATGCGGGATCTCCTGTCCCCGCCCACAGATAACAGGCCAGGTCAGATGGACAATCGGAGTAAGCTCCGGAACATCGTGGAGCTGCGCCTGGCAGGTCTGGACATCACAGATGCCTCCCTGCGGCTCATCATCCGCCACATGCCCCTGCTCTCCAAGCTGCACCTCAGTTATTGTAACCACGTCACAGACCAGTCCATCAACCTGCTCACTGCGGTTGGCACCACCACCCGGGACTCTCTGACCGAGATCATCCTGTCAGACTGCAATAAGGTCACTGATCAGTGCCTGTCCTTCTTCAAACGCTGTGGGAACATCTGCCATATTGACCTGAGGTACTGCAAGCAAGTCACCAAGGAAGGCTGTGAGCAGTTCATTGCTGAGATGTCCGTGAGTGTCCAGTTCGGGCAAGTCGAAGAAAAACTCCTGCAGAAACTGAGTTAG

Related Sequences

XP_004843907.1 Protein

Kdm2b PREDICTED: lysine-specific demethylase 2B isoform X5 [Heterocephalus glaber]

Length: 1305 aa      View alignments
>XP_004843907.1
MGALWRAVCLSPSQAPDLLLSPSLLELAVGRRGRLGTQPFHFSFPASPRPIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKDFNYEYVQREALRVPLIFREKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEMSMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQTEATNAIAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLQIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQRESMLIDAPRKASVDGFSSDSWLEMEEESCEQQPQEEEGEKEEEGDGLEKAPKPCPDGPASPGGTPSEEQETPGKKPKAPATHFFKRTLSNESEDSVKSATVPGDYPKTPTGSPATEVSAKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHAEDDPSLAVTGVPVVSWPKKTPKNRAVGRPKGKLGPSSTVKLAANRTTAGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNLMLMECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEQKMNRDNKEGQEPAKRRSECEEAPRRRSDEHPKKVPVDSILRRKSDDVHLRRKRKYEKPQELSARKRLKPGKEDKLFRKKRRSWKNAEDRMPLATKPLRRFKQEPEDDLPEAPPKSRDSDHSRSSSPTAGPSTEGAEGSEEKKKVKMRRKRRLPNKELSKELSKELNHEIQKTESSLAHENHQPIKSEPESENEEPKRPLGHCERPHRFSKGLNGTPRELRHPLGHGLRSPPRVISRPPPSVSPPKCIQMERHVIRPPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRIDLNHCKSITPLMLSGIIRRQPASLDLSWTNISKKQLSWLINRLPGLRDLVLAGCSWIAVSALCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEIILSDCNKVTDQCLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS