Details from NCBI annotation

Gene Symbol Tmem116
Gene Name transmembrane protein 116, transcript variant X2
Entrez Gene ID 101705864

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM116 ENSCPOG00000010520 (Guinea pig)

Gene Details

transmembrane protein 116

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009447, Guinea pig)

Protein Percentage 91.03%
CDS Percentage 93.24%
Ka/Ks Ratio 0.33779 (Ka = 0.0464, Ks = 0.1374)

TMEM116 ENSG00000198270 (Human)

Gene Details

transmembrane protein 116

External Links

Gene Match (Ensembl Protein ID: ENSP00000447731, Human)

Protein Percentage 83.98%
CDS Percentage 88.53%
Ka/Ks Ratio 0.37465 (Ka = 0.0881, Ks = 0.2352)

Tmem116 ENSMUSG00000029452 (Mouse)

Gene Details

transmembrane protein 116

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000091917, Mouse)

Protein Percentage 71.22%
CDS Percentage 79.03%
Ka/Ks Ratio 0.39762 (Ka = 0.191, Ks = 0.4804)

Tmem116 ENSRNOG00000027480 (Rat)

Gene Details

transmembrane protein 116 (Tmem116), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063208, Rat)

Protein Percentage 68.88%
CDS Percentage 77.95%
Ka/Ks Ratio 0.41115 (Ka = 0.2072, Ks = 0.5039)

Genome Location

Sequence Coding sequence

Length: 1014 bp    Location: 20189458..20296402   Strand: +
>XM_004843779.1
ATGGCTATTCTAAGTGTTATAGGTTCAAGTTCACTTATTACTTATGCTGTATTCCAGAATATGCAGAAATCTTCAGAGATAAGGCCACTCTTTTATCTGAGCTGCTCTGACCTGCTCCTGGGAATTTGCTGGCTTACGGAGGCACTTCTTTATGGAACTTCAACAGCCTATAAGGACATTGTCTGCTATAACCTGCAAGCAGTTGGACAGATATTCTACATTTCCTCATTTTTCTACACCATCAGTTATATCTGGTATCTGTACACAGAACTGAGGATGAAACACAACCAGAGTGGACAGAGCCCATCTCCACTGGTGGTGGCTTATACTTGTCAAGTTGGCCAGATAGCCTTCATTTTATCAAGCCTGATACCTCTACTATTGATGATACCTGTATTCTGTCTGGGCAATGCTAGTGAATGTTTCCATAACTTCAGCCAGAGTCACAGGTGTATCCTGATGCACTCACCACCATCAGCCATGGCTGAACTCTTGCCTTCTGCCAACATATCTGTCTGCAGCATACTTTATTTTTATGGTATCACCATTTTCCTGGCCAGCTTTTTATTCAGCCTCTTCACCATTATGGTCTTACTCATCCAAGCGCAGATATTGTGTAAGAAATTTGTGAAGTCAACTGGCTTTCTGGGAAGTGAACAGTGGGCAGTGATTCATATTGTGGAGCAGCGAGTACGCCTCTATCCGGTGGCCTTCCTATGCTGCTGGGGCCCAGCTATCATTCTGATGATCATAAAGCTCACCAAGCCACAGGACACCAAGCTGCATATGGCCCTCTATATTCTCCAGGCTCTAACAGCAACATCCCAGGGTCTGCTCAACTGTGGAGTGTATGGCTGGACACAGCACAAATTCCACCAACTAAAGCAAGAGGCTCGGCGAGATGCAGATACGCAAACACCATTGTTATGTTCACAGAAGAGAGTCTATAGCAGGGGCCTAGATCCACTGGAGTCCACTGTTGCTTTTGCTACCAGCTCATCCACCATTCTTTGA

Related Sequences

XP_004843836.1 Protein

Tmem116 PREDICTED: transmembrane protein 116 isoform X2 [Heterocephalus glaber]

Length: 337 aa      View alignments
>XP_004843836.1
MAILSVIGSSSLITYAVFQNMQKSSEIRPLFYLSCSDLLLGICWLTEALLYGTSTAYKDIVCYNLQAVGQIFYISSFFYTISYIWYLYTELRMKHNQSGQSPSPLVVAYTCQVGQIAFILSSLIPLLLMIPVFCLGNASECFHNFSQSHRCILMHSPPSAMAELLPSANISVCSILYFYGITIFLASFLFSLFTIMVLLIQAQILCKKFVKSTGFLGSEQWAVIHIVEQRVRLYPVAFLCCWGPAIILMIIKLTKPQDTKLHMALYILQALTATSQGLLNCGVYGWTQHKFHQLKQEARRDADTQTPLLCSQKRVYSRGLDPLESTVAFATSSSTIL