Details from NCBI annotation

Gene Symbol Rph3a
Gene Name rabphilin 3A homolog (mouse), transcript variant X2
Entrez Gene ID 101700256

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RPH3A ENSCPOG00000021317 (Guinea pig)

Gene Details

rabphilin 3A homolog (mouse)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014253, Guinea pig)

Protein Percentage 93.78%
CDS Percentage 91.9%
Ka/Ks Ratio 0.08988 (Ka = 0.0313, Ks = 0.3477)

RPH3A ENSG00000089169 (Human)

Gene Details

rabphilin 3A homolog (mouse)

External Links

Gene Match (Ensembl Protein ID: ENSP00000374036, Human)

Protein Percentage 90.95%
CDS Percentage 86.96%
Ka/Ks Ratio 0.071 (Ka = 0.0451, Ks = 0.6358)

Rph3a ENSMUSG00000029608 (Mouse)

Gene Details

rabphilin 3A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000078198, Mouse)

Protein Percentage 88.09%
CDS Percentage 83.09%
Ka/Ks Ratio 0.0727 (Ka = 0.0672, Ks = 0.9249)

Rph3a ENSRNOG00000001368 (Rat)

Gene Details

rabphilin 3A (Rph3a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001844, Rat)

Protein Percentage 88.82%
CDS Percentage 83.53%
Ka/Ks Ratio 0.06854 (Ka = 0.0638, Ks = 0.9307)

Genome Location

Sequence Coding sequence

Length: 2079 bp    Location: 19528516..19439373   Strand: -
>XM_004843761.1
ATGACGGACACCGTGGTCAGCAGCAGCTCCAACCGATGGATGTACCCCAACCAGCGTCCCCTGCAGTCCAGTGACAAAGAACAGGTCCAGGCAGGATGGTCTGTCCACCCCAGTGGCCAGACAGACAGACAGAGGAAGCAGGAGGAGCTGACAGATGAGGAGAAGGAAATCATCAACAGGGTGATCGCTCGGGCTGAGAAAATGGAGGAGATGGAGCAGGAGCGGATTGGGCGCCTGGTGGATCGCCTGGAGAACATGAGGAAGAATGTGGCCGGGGACGGGGTGAACCGCTGCATCCTGTGTGGGGAACAGCTGGGGATGCTGGGCTCTGCCTGTGTCGTCTGTGAGGACTGCAAGAAGAACGTCTGCACCAAGTGTGGGGTGGAGACTTCCAACAACCGCCTGCACCCTGTGTGGCTCTGCAAAATCTGCATCGAGCAGAGGGAGGTATGGAAGCGTTCAGGAGCATGGTTCTTCAAAGGCTTCCCCAAACAGGTTCTCCCACAGCCCATGCCTATAAAGAAGACCAAACCCCAGCAGCCTATCACCAAGCCTGCTGGTCTAGAGCAGCCCACCCGTGAGCCCAAGCACACTGTTCCGGCTCCAGCACAAGGTGACACCGAGGACAGGAGGGCCCCAGGTCAGAAGCCAGGCCCTGACCCGGCCTCCACCCCTGGCCGAGGAAGCCATGGGCCTCCGGTACGCAGAGCCTCGGAGGCGCGCATGAGCTCAGCCACCCGGGACTCTGAGAGCTGGGACCATGGCCACAGTGGGAGTGCAGGAGATGCCAGCCGGAGCCCCGCAGGTTTGAGACGCACCAATTCAGTGCAGGCCTCCCGCCCCTCCCCGGCCTCGGGGCCCAGCCCAGCACCTCCCCAGCCAGGGCCACCAGGGCCAGCAGGGGGCGGCAGAGCGGCTCCTGGCCCTGCAGGACGCTTTCCAGACCAGAGAGCAGAGGTGGCCATGGGTGGCCCTGGCTATCTGGGGCCCACCACCCCACTGCGGGAGGAGAGGACAGGGGGAGCCAGGGAGGAGCAAGCGGCCCCACCGCTGGGGCCCTATTCCCAAGCATCCGCTGCCGCCGCCCCCCAGCCGGCCACCTCTGCCCGCCCGCTGCCCCCAGAGGAGGAGGAGGAGGCCAACAGCTATGATTCTGACGAAGCAACCACCCTGGGTGCCCTGGAATTCAGCCTTCTCTACAACCAGGACAACAGCTCCCTGCAGTGCACCATCATAAAGGCCAAGGGACTGAAGCCCATGGACTCCAACGGTTTGGCCGATCCCTATGTCAAGTTGCACCTCCTGCCAGGAGCCAGCAAGTCCAACAAGCTCCGGACGAAGACTCTGCGGAACACCCGGAACCCCATCTGGAACGAGACCCTGGTGTACCATGGCATCACGGACGAGGACATGCAGAGGAAGACCCTCAGGATCTCTGTTTGTGACGAGGACAAATTTGGCCATAACGAGTTCATTGGTGAAACGAGATTCTCGCTCAAGAAACTGAAACCGAACCAGAGGAAGAACTTCAACATCTGTCTGGAGCGGGTGATCCCGATGAAGCGCGCAGGGACCACCGGCTCGGCCCGAGGCATGGCCCTTTACGAGGAGGAGCAGGTGGAGCGCATTGGTGACATAGAGGAGCGCGGCAAGATCCTGGTGTCCCTGATGTACAGCACTCAGCAAGGAGGCCTCATCGTGGGCATCATCCGCTGTGTGCACCTGGCCGCCATGGACGCCAATGGCTACTCAGACCCTTTCGTCAAGCTCTGGCTGAAACCGGACATGGGAAAGAAGGCCAAACACAAGACTCAAATTAAAAAGAAAACCTTGAATCCTGAATTTAATGAGGAGTTTTTCTATGACATCAAACACAGTGACCTGGCCAAGAAGTCACTGGACATCTCCGTGTGGGACTATGACATTGGCAAGTCCAACGATTACATTGGAGGCTGCCAGCTGGGGATCTCAGCCAAAGGAGAGCGCTTGAAACACTGGTACGAGTGTCTGAAGAACAAGGACAAGAAGATCGAGCGCTGGCACCAGCTACAGAATGAGAACCACGTGTCGAGCGATTAG

Related Sequences

XP_004843818.1 Protein

Rph3a PREDICTED: rabphilin-3A isoform X2 [Heterocephalus glaber]

Length: 692 aa      View alignments
>XP_004843818.1
MTDTVVSSSSNRWMYPNQRPLQSSDKEQVQAGWSVHPSGQTDRQRKQEELTDEEKEIINRVIARAEKMEEMEQERIGRLVDRLENMRKNVAGDGVNRCILCGEQLGMLGSACVVCEDCKKNVCTKCGVETSNNRLHPVWLCKICIEQREVWKRSGAWFFKGFPKQVLPQPMPIKKTKPQQPITKPAGLEQPTREPKHTVPAPAQGDTEDRRAPGQKPGPDPASTPGRGSHGPPVRRASEARMSSATRDSESWDHGHSGSAGDASRSPAGLRRTNSVQASRPSPASGPSPAPPQPGPPGPAGGGRAAPGPAGRFPDQRAEVAMGGPGYLGPTTPLREERTGGAREEQAAPPLGPYSQASAAAAPQPATSARPLPPEEEEEANSYDSDEATTLGALEFSLLYNQDNSSLQCTIIKAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPIWNETLVYHGITDEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKPNQRKNFNICLERVIPMKRAGTTGSARGMALYEEEQVERIGDIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNENHVSSD