Details from NCBI annotation

Gene Symbol Pxn
Gene Name paxillin, transcript variant X6
Entrez Gene ID 101701226

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PXN ENSCPOG00000000411 (Guinea pig)

Gene Details

paxillin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000362, Guinea pig)

Protein Percentage 38.73%
CDS Percentage 51.79%
Ka/Ks Ratio 0.53367 (Ka = 0.7306, Ks = 1.369)

PXN ENSG00000089159 (Human)

Gene Details

paxillin

External Links

Gene Match (Ensembl Protein ID: ENSP00000267257, Human)

Protein Percentage 38.85%
CDS Percentage 49.54%
Ka/Ks Ratio 0.04003 (Ka = 0.6712, Ks = 16.7692)

Pxn ENSMUSG00000029528 (Mouse)

Gene Details

paxillin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000083709, Mouse)

Protein Percentage 40.26%
CDS Percentage 49.31%
Ka/Ks Ratio 0.03784 (Ka = 0.6539, Ks = 17.2811)

Pxn ENSRNOG00000001149 (Rat)

Gene Details

paxillin (Pxn), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000043928, Rat)

Protein Percentage 13.61%
CDS Percentage 31.12%
Ka/Ks Ratio 0.18807 (Ka = 1.8543, Ks = 9.8593)

Genome Location

Sequence Coding sequence

Length: 1773 bp    Location: 13421417..13430828   Strand: +
>XM_004843680.1
ATGAGCTCTTCCCTGGGCAGCAACCTTTCTGAACTTGATCGTCTGCTGTTGGAACTGAATGCCGTGCAGCACAATTCTCCAGGCTTCCCTGCAGATGAGGCCAACTCAAGCCTCCCACTGCTTGGGGCCCTGAGCCCTCAATGTGGCATTCCAGAGAATAACAGCCCCGTGGGGGGCAAAGTTGGGCCCCCGACAAAAGAGAAACCCAAGCGGAACGGTGCCCGGGGCCTAGAGGATGTGCGGCCCAGCGTGGAGAGCCTCTTGGATGAATTGGAGAGCTCCGTGCCCAGCCCTGTCCCCGCCATCACTGTGAACCAGGGCGAGATGAGCAGCCCACAGCGAATCACCTCCAGCCAGCAGCAGACTCGTATCTCGGCCTCCTCTGCCACCAGGGAGCTGGATGAGCTGATGGCCTCGCTGTCAGATTTTAAGACCAGCTCCTCTGCTGTGGCCCTGAGCTCCTCAGGGCTGTTTCCTGTCTCACGTCCATCTCCAGCCCATACCCTTCCTGGTCCTCCTTCTCCAGCTCCTCTTGTGCCTTTTGTATTCCTGCCTTCCACCTCTAAATGCTCCCCTCAAGGCCAAGGCCATACCCCAGAGGTCCTCTGCACTGAGGAAAATAGACGGGGCCTCCTACTTCCTGTGGCCCCCAGCTGGCTTGATTTGGCTGGCCTTGGGGTGACGTCTGACACCTATAATTCAAAGTCTCCCTCTGCAGAGGTTTCTCCAGGGTCATTAGGTGCAGAGGGCCAGGCTCCAGTTAGGAGGGACCTTCTGAATCCTGCGAGTGAGCCCTCTATGGCTTCCCTTTGCCACACTCCACCTTCTGTTGGGAACACAGTCTCCCAGGAGCCTGGAGACCCTAAAGGGCCACAGGGTGACCCTTTGTGTCCAGAGGATGCTGTGGTTGCCACTTGGAAGTGGCCAAGGGCTTTGGAGCCATCCAGCCTTGAGACTACCTATGGAGCTGCTTGCAGCTTTCAGGAAGTAATGGAGCCAGCTGTTGAGACTGTGGATTGTCAGGCCATCTTCTCAGATACCTGGAATTTCGAAAAGGATTGTGGCCTGCAGAAGAGGGCAAGGCCAGAGCCAGGGGGGCTGGAAAGCAGCTGCCCTGCCCCAGCCAACAAGGAGCAGTTGGGTGAAGCGAGGCCCAGGAGGGGAAGCCTGGTGGTGCTGGGCCAGGGACCTGAGACCCCAAGGAGCCCAGAAGGTACCCCTGAAGCTGCTGCTGAGGCCAGGAAGGAACAGCCGGAGCTTCCACATGCCATGGGCGCACCCAGCACTACAGAGAGGATTTCCACCTCCGGCCAGATCCATTCTGTGATCAGGAGGAGCCGGGAGACGGGCCACGCGCACCCCATGTCCCGGGAGCCCTCCCCTCGCCGCCGGCTGGACCCCGCCACCCTGAGCAGGACCCCACCCCAGGAGCAGCTCATCGCAGAGCTGCAGGGCCGGCTGGGTATCCAGCCGGAGGCGGAGGAGGCAGCAGGGCCAGCCGGGGCTTCTGCTCAGGACTGGCTGACCGAGGGCATCGTCATCACTGTGCAGCCTCGTGGGCGGAGGGCTGGGGGGCAGCTGGTAGAGAAGGTAGTCAGGGCCCGGGTGCAGGTGTCCAGATGCCTCCTCGGCCTCAGTGCTGGCTGCAGGAGAGATCTGGGGGTGGAGGGGCGGATTTTTGTATCCTGTGACCTTGTCAGACTGGCTTCACTTTCGATGCCAGAGTGGGAAGGCCCAGGAGCCTGGGGGTATCACCTTCCTTGTGCTCACTGA

Related Sequences

XP_004843737.1 Protein

Pxn PREDICTED: flocculation protein FLO11 isoform X6 [Heterocephalus glaber]

Length: 590 aa      View alignments
>XP_004843737.1
MSSSLGSNLSELDRLLLELNAVQHNSPGFPADEANSSLPLLGALSPQCGIPENNSPVGGKVGPPTKEKPKRNGARGLEDVRPSVESLLDELESSVPSPVPAITVNQGEMSSPQRITSSQQQTRISASSATRELDELMASLSDFKTSSSAVALSSSGLFPVSRPSPAHTLPGPPSPAPLVPFVFLPSTSKCSPQGQGHTPEVLCTEENRRGLLLPVAPSWLDLAGLGVTSDTYNSKSPSAEVSPGSLGAEGQAPVRRDLLNPASEPSMASLCHTPPSVGNTVSQEPGDPKGPQGDPLCPEDAVVATWKWPRALEPSSLETTYGAACSFQEVMEPAVETVDCQAIFSDTWNFEKDCGLQKRARPEPGGLESSCPAPANKEQLGEARPRRGSLVVLGQGPETPRSPEGTPEAAAEARKEQPELPHAMGAPSTTERISTSGQIHSVIRRSRETGHAHPMSREPSPRRRLDPATLSRTPPQEQLIAELQGRLGIQPEAEEAAGPAGASAQDWLTEGIVITVQPRGRRAGGQLVEKVVRARVQVSRCLLGLSAGCRRDLGVEGRIFVSCDLVRLASLSMPEWEGPGAWGYHLPCAH