Details from NCBI annotation

Gene Symbol Msi1
Gene Name musashi RNA-binding protein 1, transcript variant X3
Entrez Gene ID 101698816

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MSI1 ENSCPOG00000012361 (Guinea pig)

Gene Details

musashi RNA-binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011123, Guinea pig)

Protein Percentage 99.69%
CDS Percentage 95.87%
Ka/Ks Ratio 0.00806 (Ka = 0.0014, Ks = 0.1769)

MSI1 ENSG00000135097 (Human)

Gene Details

musashi RNA-binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000257552, Human)

Protein Percentage 99.71%
CDS Percentage 95.43%
Ka/Ks Ratio 0.00606 (Ka = 0.0013, Ks = 0.2167)

Msi1 ENSMUSG00000054256 (Mouse)

Gene Details

musashi RNA-binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000120516, Mouse)

Protein Percentage 99.42%
CDS Percentage 93.88%
Ka/Ks Ratio 0.00864 (Ka = 0.0026, Ks = 0.3025)

Msi1 ENSRNOG00000001156 (Rat)

Gene Details

musashi RNA-binding protein 1 (Msi1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001532, Rat)

Protein Percentage 99.35%
CDS Percentage 94.3%
Ka/Ks Ratio 0.01101 (Ka = 0.0029, Ks = 0.2642)

Genome Location

Sequence Coding sequence

Length: 1032 bp    Location: 13291096..13316404   Strand: +
>XM_004843671.1
ATGGAGACTGACGCGCCCCAGCCCGGCCTCGCCTCCCCGGACTCGCCGCACGACCCCTGCAAGATGTTCATCGGGGGACTCAGTTGGCAGACTACGCAGGAAGGGCTGCGCGAATACTTCGGCCAGTTCGGGGAGGTGAAGGAGTGTCTGGTGATGCGGGACCCCCTGACGAAGAGATCCAGGGGTTTCGGCTTCGTCACTTTCATGGACCAGGCGGGGGTGGATAAAGTGCTGGCGCAATCGCGGCACGAGCTCGACTCCAAAACAATTGACCCCAAGGTGGCCTTTCCTCGGAGAGCACAGCCTAAGATGGTGACTCGAACGAAGAAGATCTTTGTTGGGGGACTGTCGGTGAACACCACGGTGGAGGATGTGAAGCAATATTTTGAGCAGTTCGGGAAGGTGGATGATGCCATGCTGATGTTCGACAAAACCACCAACCGGCACCGAGGGTTCGGGTTTGTCACATTTGAAAGTGAAGACATCGTGGAGAAAGTGTGTGAAATCCATTTCCATGAAATCAACAACAAAATGGTGGAATGTAAGAAAGCTCAGCCAAAGGAGGTGATGTCCCCAACAGGCTCAGCCCGGGGGAGGTCTCGAGTCGTGCCCTACGGAATGGATGCCTTCATGCTGGGCATCGGCATGCTGGGTTATCCAGGCTTCCAAGCTACGACCTATGCCAGCCGGAGTTACACAGGCCTTGCCCCTGGCTACACCTACCAGTTCCCCGCCATTCCTCTCACTGCTTATGGACCAATGGCAGCGGCGGCGGCGGCAGCAGCTGTAGTCCGAGGGACAGGCTCTCACCCCTGGACGATGGCTCCCCCTCCAGGTTCGACTCCCAGCCGCACAGGGGGCTTCCTGGGGACCACCAGCCCTGGCCCGATGGCTGAGCTCTATGGGGCAGCCAACCAGGACTCAGGGGTCAGCAGTTACATCAGTGCCGCCAGCCCCGCCCCCAGCACCGGATTTGGCCACAGTCTTGGGGGTCCCTTGATTGCCACAGCCTTCACCAATGGGTACCACTGA

Related Sequences

XP_004843728.1 Protein

Msi1 PREDICTED: RNA-binding protein Musashi homolog 1 isoform X3 [Heterocephalus glaber]

Length: 343 aa      View alignments
>XP_004843728.1
METDAPQPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSARGRSRVVPYGMDAFMLGIGMLGYPGFQATTYASRSYTGLAPGYTYQFPAIPLTAYGPMAAAAAAAAVVRGTGSHPWTMAPPPGSTPSRTGGFLGTTSPGPMAELYGAANQDSGVSSYISAASPAPSTGFGHSLGGPLIATAFTNGYH