Sequence details NCBI ID: XM_004843660.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rnf10
Gene Name ring finger protein 10
Entrez Gene ID 101726241

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RNF10 ENSCPOG00000012331 (Guinea pig)

Gene Details

ring finger protein 10

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011094, Guinea pig)

Protein Percentage 94.8%
CDS Percentage 93.73%
Ka/Ks Ratio 0.15333 (Ka = 0.0279, Ks = 0.1816)

RNF10 ENSG00000022840 (Human)

Gene Details

ring finger protein 10

External Links

Gene Match (Ensembl Protein ID: ENSP00000322242, Human)

Protein Percentage 95.06%
CDS Percentage 93.08%
Ka/Ks Ratio 0.11638 (Ka = 0.0248, Ks = 0.213)

Rnf10 ENSMUSG00000041740 (Mouse)

Gene Details

ring finger protein 10

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000107725, Mouse)

Protein Percentage 91.91%
CDS Percentage 90.2%
Ka/Ks Ratio 0.12557 (Ka = 0.0404, Ks = 0.3218)

Rnf10 ENSRNOG00000001172 (Rat)

Gene Details

ring finger protein 10 (Rnf10), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063855, Rat)

Protein Percentage 92.13%
CDS Percentage 89.89%
Ka/Ks Ratio 0.11753 (Ka = 0.04, Ks = 0.3402)

Genome Location

Sequence Coding sequence

Length: 2433 bp    Location: 13134372..13094084   Strand: -
Raw sequence   
>XM_004843660.1
ATGCCGCAGAGCTCCCCCAACTCCGCCGCCACCGCCACCGACATGGACAAGAACAGCGGCTCCAACAGCTCCTCCGCCTCTTCGGGCAGCAGCAACAAGGGGCAGCAGCCGCCCCGCTCCGCCTCAGCGGGGCCTGCCGGCGAGTCTAAACCCAAAAGCGATGGAAAGAACTCAAATGGATCAAAGCGTTATAATCGCAAGCGAGAACCTTCCTACCCCAAAAATGAAAATTTTACCAACCAGTCCCGTCGCTCCAATTCACAGAAAAGCAAAACTTTTAATAAGATGCCTCCTCAAAGGGGCGGCGGCAGCAGCAAGCTCTTTAGCTCTTCTTTTAATGGTGGAAGACGAGATGAGGTAGCAGAGGCTCAACGGGCAGAGTTTAGCCCTGCCCAATTCTCTGGCCCTAAGAAGATCAACCTGAACCACTTGTTGAATTTCACCTTTGAACCGCGTGGCCAGACAGGTCACTTTGAAGGCAGTGGACATGGCAGCTGGGGAAAAAGAAACAAGTGGGGACATAAGCCTTTTAATAAGGAACTCTTTCTACAGGCCAACTGCCAATTTGTGGTGTCCGAAGACCAAGACTACACAGCTCATTTTGCTGATCCTGATACCTTAGTCAACTGGGACTTTGTGGAACAAGTGCGTATCTGTAGCCATGAAGTGCCGTCTTGCCCAATATGCCTCTATCCACCTACTGCAGCCAAGATAACCCGTTGTGGACACATCTTCTGCTGGGCATGCATTCTGCATTATCTTTCACTGAGTGAGAAGACCTGGAGTAAATGTCCCATCTGTTACAGTTCTGTGCATAAGAAGGATCTCAAGAGTGTTGTTGCCACAGAGTCACGCCAGTATGTTGTTGGTGATACCATTACGATGCAGCTGATGAAAAGGGAGAAAGGAGTATTGGTGGCCTTGCCCAAGTCCAAGTGGATGAATGTAGACCATCCTATTCATCTAGGAGATGAACAGCTCAGCCAGTATTCCAAGCTTCTGCTGGCCTCTAAGGAGCAGGTGCTGCATCGAGTTGTTCTGGAAGAGAAAGTAGCCCTGGAGCGGCAACTGGCAGAGGAGAAGCACACTCTCGAGTCGTGCTTTGTTGAGGCAGCTATCCAGGAGCTCAAGACTCGGGAAGAGGCTCTGTCAGGATTGGCTGAAAGCAGAGGGGAGGTCCCTGGTGTCATTACTGCTCTGGAACAACTAGTGCTGATGGCTCCCTTGGCGAAAAAGTCTGATTTTCAACCCAGGAAGGGTGTGCTAGAATATCTGTCTGCCTTTGATGAGAAAACCACAGAAGTTTCTTCTCTGGACTCTCCTCGCCCTCTTGCTCTCCCTCTGCTAGAAGAGGAGGAAGCAGTGTCTGAACCAGAGCCTGAGGGTTTGTCAGAGACCTGTGATGACTCGGAGTTAGCAGATGACAATCTTGGGGAGGGGACCGTTTGTATTGAGTCCAGCCAGCAGGAACCTGTCACTAAGCCTGGCTTCACACACCTGAGCAGCTCACCTTGTTACTACTTTTACCAAGCGGAGGATGGGCAGCACATGTTTCTGCACCCCATCAATGTGCGCTGCCTTGTGCGAGAGTATGGCAGCCTGGAGCGGAGCCCGGAGAAGATCTCAGCGACTGTGGTGGAAATCGCCGGGTACTCCATGTCTGAGGATGTTCGACAGCGTCATAGATATCTCTCTCACTTGCCGCTCACCTGTGAGTTCAGCATCTGTGAACTGGCTCTGCAGCCTCCTGTGGTCTCTAAGGAAACCCTAGAGATATTCTCAGATGATATTGAGAAGAGGAAGCATCAGCGCCAGAAGAAGGCTCGGGAGGAACGTCGCCGAGAACGTAGGATTGAGATGGAGGAGAACAAGAAACAGGGCAAGTATCCGGAGGTCCACATTCCCCTGGAGAATCTACAGCAATTTCCTGCTTTCAACTCATATACCTGCTCTTCTGATTCTGCTTTGGGTCCTACCAGCACTGAGGGTCATGGAGCCCTCTCCCTTTCTCCTCTTAGCAGAAGTCCAGGTTCTCATGCAGACTTTCTGCTGACCCCTCTGTCACCCCCTGCCAGTCAGGGCAGTCCCTCATTCTGCGTTGGAAGTCTGGAAGAAGACTCTCCCTTCCCTTCCTTTGCCCAGATGCTGAGGGTTGGAAAAGCAAAAGCAGATGTGTGGCCCAAAACTCCAAAGAAAGATGAGAATAGCTTAGTTCCTCCTGCCCCTATGGACAGTGATGGAGAGAGTGATAACTCTGACCGCGTTCCTGTACCCAGTTTCCAGAATTCTTTCAGCCAAGCTATTGAAGCAGCCTTCATGAAACTGGACACACCAGCTACTTCAGATCCCCTCTCTGAAGAAAAAGGAGGAAAGAAAAGGAAAAAACAGAAACAGAAGCTCCTGTTCAGCACCTCAGTCGTCCATACCAAGTGA

Related Sequences

XP_004843717.1 Protein

Rnf10 PREDICTED: RING finger protein 10 [Heterocephalus glaber]

Length: 810 aa      View alignments
>XP_004843717.1
MPQSSPNSAATATDMDKNSGSNSSSASSGSSNKGQQPPRSASAGPAGESKPKSDGKNSNGSKRYNRKREPSYPKNENFTNQSRRSNSQKSKTFNKMPPQRGGGSSKLFSSSFNGGRRDEVAEAQRAEFSPAQFSGPKKINLNHLLNFTFEPRGQTGHFEGSGHGSWGKRNKWGHKPFNKELFLQANCQFVVSEDQDYTAHFADPDTLVNWDFVEQVRICSHEVPSCPICLYPPTAAKITRCGHIFCWACILHYLSLSEKTWSKCPICYSSVHKKDLKSVVATESRQYVVGDTITMQLMKREKGVLVALPKSKWMNVDHPIHLGDEQLSQYSKLLLASKEQVLHRVVLEEKVALERQLAEEKHTLESCFVEAAIQELKTREEALSGLAESRGEVPGVITALEQLVLMAPLAKKSDFQPRKGVLEYLSAFDEKTTEVSSLDSPRPLALPLLEEEEAVSEPEPEGLSETCDDSELADDNLGEGTVCIESSQQEPVTKPGFTHLSSSPCYYFYQAEDGQHMFLHPINVRCLVREYGSLERSPEKISATVVEIAGYSMSEDVRQRHRYLSHLPLTCEFSICELALQPPVVSKETLEIFSDDIEKRKHQRQKKAREERRRERRIEMEENKKQGKYPEVHIPLENLQQFPAFNSYTCSSDSALGPTSTEGHGALSLSPLSRSPGSHADFLLTPLSPPASQGSPSFCVGSLEEDSPFPSFAQMLRVGKAKADVWPKTPKKDENSLVPPAPMDSDGESDNSDRVPVPSFQNSFSQAIEAAFMKLDTPATSDPLSEEKGGKKRKKQKQKLLFSTSVVHTK