Details from NCBI annotation

Gene Symbol Cabp1
Gene Name calcium binding protein 1, transcript variant X1
Entrez Gene ID 101724754

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CABP1 ENSCPOG00000025419 (Guinea pig)

Gene Details

calcium binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017100, Guinea pig)

Protein Percentage 89.57%
CDS Percentage 87.83%
Ka/Ks Ratio 0.14045 (Ka = 0.0503, Ks = 0.3585)

CABP1 ENSG00000157782 (Human)

Gene Details

calcium binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000317310, Human)

Protein Percentage 94.57%
CDS Percentage 94.66%
Ka/Ks Ratio 0.18414 (Ka = 0.0287, Ks = 0.1558)

Cabp1 ENSMUSG00000029544 (Mouse)

Gene Details

calcium binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031519, Mouse)

Protein Percentage 74.01%
CDS Percentage 70.93%
Ka/Ks Ratio 0.1714 (Ka = 0.2416, Ks = 1.4098)

Cabp1 ENSRNOG00000001173 (Rat)

Gene Details

calcium binding protein 1 (Cabp1), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000001551, Rat)

Protein Percentage 92.28%
CDS Percentage 89.26%
Ka/Ks Ratio 0.07534 (Ka = 0.0374, Ks = 0.4964)

Genome Location

Sequence Coding sequence

Length: 1107 bp    Location: 13050165..13027844   Strand: -
>XM_004843655.1
ATGGGCGGCGGCGACGGGGCCGCATTTAAGCGGCCGGGGGACGGCGCCCGCCTCCAGCGCGTCCTCGGGCTTGGTTCCCGCCGGGCGCCCCGCGCTCTGCCCGCCGGGGGCCCCGCGCCGCGCCGCCCTGCGCCGCCCCCGCCGGGCCATGCGAGCGCGGGCCCCGCCGAGATGAGCTCGCACATCGCCAAAAGCGAGTCCAAGACGTCGCTGCTGAAAGCGGCGGCGGCGAGCGGGGGCAGCCGGGCTCCCCGCCACGGCCCTGCCCGGGATCCGGGGCTGCCTGGCCGCCGGCTGCCCGTCGCCTGCCCGAGCACGCCGCCGCCGTCCGGGGACCCCAGTTCGCGGAGGCCCCTGTGCCGGCCGGTGCCGCGCGAGGAGAGCGCGCGAGGGAGCCGGCGTGGGCTCCCCCTGGCGCACTGCAGGCCCCGGGAGGCGCTGCCGGCCGCGGCGTCCCGACCTTTGCCGCAGTCGCCGCTGCCGCCGGCCCGCGGGCGGGATGGGGAGGAACGGGGGCTGTCCCCGGCGCTCGGCCTCCGGGGCTCCCTGCGAGCCTCGGGCCGCGGGGACTCCGCGCCCGCCGCCGCGACCGAGGCGGACCCGTTCCTCCACCGGCTGCGCCCCATGCTCAGCTCCGCCTTCGGCCAGGATAGATCACTGCGGCCAGAAGAGATCGAAGAGCTCCGAGAGGCCTTCAGAGAATTCGACAAGGACAAGGATGGCTATATCAACTGCCGGGACCTGGGCAACTGCATGCGCACCATGGGCTACATGCCCACCGAGATGGAGCTCATTGAGCTGTCCCAGCAGATCAACATGAACTTGGGTGGCCATGTGGATTTTGATGACTTCGTGGAACTAATGGGGCCAAAACTCCTGGCAGAGACAGCAGATATGATTGGAGTAAAGGAACTGCGAGATGCCTTTCGAGAGTTTGACACTAATGGCGATGGGGAAATAAGCACCAGTGAGTTGCGCGAGGCCATGAGGAAGCTCCTGGGCCATCAGGTGGGACACCGAGACATAGAGGAAATTATCCGAGATGTGGACCTCAATGGGGACGGACGAGTGGACTTTGAAGAGTTTGTCCGGATGATGTCCCGCTGA

Related Sequences

XP_004843712.1 Protein

Cabp1 PREDICTED: calcium-binding protein 1 isoform X1 [Heterocephalus glaber]

Length: 368 aa      View alignments
>XP_004843712.1
MGGGDGAAFKRPGDGARLQRVLGLGSRRAPRALPAGGPAPRRPAPPPPGHASAGPAEMSSHIAKSESKTSLLKAAAASGGSRAPRHGPARDPGLPGRRLPVACPSTPPPSGDPSSRRPLCRPVPREESARGSRRGLPLAHCRPREALPAAASRPLPQSPLPPARGRDGEERGLSPALGLRGSLRASGRGDSAPAAATEADPFLHRLRPMLSSAFGQDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR