Details from NCBI annotation

Gene Symbol Usp30
Gene Name ubiquitin specific peptidase 30
Entrez Gene ID 101715886

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

USP30 ENSCPOG00000013022 (Guinea pig)

Gene Details

ubiquitin specific peptidase 30

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011722, Guinea pig)

Protein Percentage 96.32%
CDS Percentage 92.91%
Ka/Ks Ratio 0.07893 (Ka = 0.0193, Ks = 0.245)

USP30 ENSG00000135093 (Human)

Gene Details

ubiquitin specific peptidase 30

External Links

Gene Match (Ensembl Protein ID: ENSP00000257548, Human)

Protein Percentage 93.81%
CDS Percentage 90.39%
Ka/Ks Ratio 0.10379 (Ka = 0.0338, Ks = 0.3252)

Usp30 ENSMUSG00000029592 (Mouse)

Gene Details

ubiquitin specific peptidase 30

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031588, Mouse)

Protein Percentage 88.97%
CDS Percentage 84.2%
Ka/Ks Ratio 0.08842 (Ka = 0.0596, Ks = 0.6744)

Usp30 ENSRNOG00000028556 (Rat)

Gene Details

ubiquitin specific peptidase 30 (Usp30), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000034698, Rat)

Protein Percentage 88.2%
CDS Percentage 84.98%
Ka/Ks Ratio 0.11068 (Ka = 0.065, Ks = 0.5869)

Genome Location

Sequence Coding sequence

Length: 1554 bp    Location: 12219156..12248700   Strand: +
>XM_004843632.1
ATGCTGCGCTCCCGGGCCGAGGCGGCGGTGACCGCGGCTGACAGGACCATCCAGCGCTTTCTGCGGGCTGGGGCTGCTGTCAGATATAAAGTCATGAAAAACTGGGGAGTTATAGGTGGAATCGCTGCTGCCCTTGCAGCAGGAATCTATGTTATTTGGGGACCCATTACAGAAAGGAAGAAACGCAGAAAAGGGCTTGTACCTGGCCTCGTTAATTTAGGGAACACCTGCTTCATGAACTCCTTGCTACAGGGCTTGTCTGCCTGTCCTGCCTTCATCAGGTGGCTGGAGGAGTTCACCACCCAGTACACCAGGGACCAGAAGGAGCCCCCGCCACACCAGCACTTGTCCTTGACCCTGCTGCACCTCCTGAAAGCTTTGTCCTGCCAAGAAGTGACCGAGGATGAGGTCTTAGATGCCAGCTGCTTGCTGGATGTCTTGAGGATGTACAGATGGCAGATCTCTTCCTTTGAAGAACAGGATGCTCATGAATTATTCCACGTCATTACCTCATCCCTGGAAGATGAGCGAGATCATCAACCACGGGTCACACATTTGTTCGATGTCCATTCCCTGGAGCAGCAGTCAGAAATAACTCCCAAACAAATAACCTGCCGCACAAGAGGGTCTCCTCATCCCACGTCCGATCACTGGAAGTCTCAACACCCATTTCATGGAAGACTTACTAGTAATATGGTCTGCAAACACTGTGAACACCAGAGTCCTGTTCGATTTGATACCTTTGATAGCCTTTCACTAAGTATTCCAGCTGCCACTTGGGGTCATCCATTGACCCTGGACCACTGCCTTCACCACTTCATCTCATCGGAGTCTGTGCGGGATGTTGTATGTGACAACTGTACAAAGATTGAAGCAAAAGGAACATTGAACAGGGAAAAAGTGGAACACCAGAGGACCACATTTGTTAAACAGTTAAAACTAGGGAAGCTCCCTCAGTGCCTGTGCATCCACCTCCAGCGGCTGAGCTGGTCCAGCCATGGCACGCCTCTGAAGCGGCATGAACACGTCCAGTTCAATGAGTTCCTGATGATGGACATCTACAAGTACCGTCTCCTGGGACATAAACCCAGTTGGCACAACCCTAAACTGAGTGAGAACTCAGGGCCTGTGCTGGAACTGCAGGATGGGCCGTCAGCCCCCAAACCAGTTCTGAATCAGCCAGGGGCCCCCAAGACACAACTTTTTATGAATGGCGCCTGTTCCCCATCTTTATTGCCAACCCTGACACCTGTGATGCCCTTCCCTCTCCCAGCTGTTCCTGACTACAGCTCCTCCACATACCTTTTTCGGCTGATGGCCGTTGTCGTCCACCATGGAGACATGCACTCTGGACACTTTGTCACTTACCGACGGTCCCCGCCTTCGACCAAGAACCCTCTCTCCACCAGCAACCAGTGGCTGTGGATTTCAGATGACACTGTCCGAAAAGCCAGCCTACAGGAGGTCCTGTCTTCCAGTGCTTACCTGCTGTTCTATGAACGGGTTCTCTCCAGGGTTCAGCACCAGGGCCAGGAGTACAAGTGTGAGGAGTGA

Related Sequences

XP_004843689.1 Protein

Usp30 PREDICTED: ubiquitin carboxyl-terminal hydrolase 30 [Heterocephalus glaber]

Length: 517 aa      View alignments
>XP_004843689.1
MLRSRAEAAVTAADRTIQRFLRAGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERKKRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIRWLEEFTTQYTRDQKEPPPHQHLSLTLLHLLKALSCQEVTEDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDHQPRVTHLFDVHSLEQQSEITPKQITCRTRGSPHPTSDHWKSQHPFHGRLTSNMVCKHCEHQSPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTKIEAKGTLNREKVEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGTPLKRHEHVQFNEFLMMDIYKYRLLGHKPSWHNPKLSENSGPVLELQDGPSAPKPVLNQPGAPKTQLFMNGACSPSLLPTLTPVMPFPLPAVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSTKNPLSTSNQWLWISDDTVRKASLQEVLSSSAYLLFYERVLSRVQHQGQEYKCEE