Details from NCBI annotation

Gene Symbol Svop
Gene Name SV2 related protein homolog (rat)
Entrez Gene ID 101715538

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SVOP ENSCPOG00000013976 (Guinea pig)

Gene Details

SV2 related protein homolog (rat)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012593, Guinea pig)

Protein Percentage 99.64%
CDS Percentage 95.56%
Ka/Ks Ratio 0.00905 (Ka = 0.0017, Ks = 0.1888)

SVOP ENSG00000166111 (Human)

Gene Details

SV2 related protein homolog (rat)

External Links

Gene Match (Ensembl Protein ID: ENSP00000299134, Human)

Protein Percentage 98.34%
CDS Percentage 91.79%
Ka/Ks Ratio 0.02098 (Ka = 0.0079, Ks = 0.3761)

Svop ENSMUSG00000042078 (Mouse)

Gene Details

SV2 related protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000050730, Mouse)

Protein Percentage 95.8%
CDS Percentage 89.54%
Ka/Ks Ratio 0.03824 (Ka = 0.0196, Ks = 0.5125)

Svop ENSRNOG00000000693 (Rat)

Gene Details

SV2 related protein

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000000874, Rat)

Protein Percentage 91.39%
CDS Percentage 85.71%
Ka/Ks Ratio 0.08206 (Ka = 0.0536, Ks = 0.6533)

Genome Location

Sequence Coding sequence

Length: 1647 bp    Location: 12199853..12122858   Strand: -
>XM_004843631.1
ATGGAGGAGGACTTATTCCAGCTCAGGCAGCTGCCGGTGGTGAAATTCCGTCGCACAGGTGAGAGTGCAAGGTCTGAGGACGACACAGCTTCGGGAGAGCATGAGGTCCAGATCGAAGGGGTCCGAGTGGGCCTAGAAGCTGTTGAGCTGGACGATGGAGCAGCTGTGCCCAAGGAATTTGCCAATCCCACTGATGATACTTTCATGGTGGAAGATGCGGTGGAAGCCATTGGGTTTGGAAAGTTTCAGTGGAAGCTGTCTGTGCTCACCGGCTTAGCTTGGATGGCCGATGCCATGGAGATGATGATCCTGAGCATCCTGGCTCCACAGCTGCACTGCGAGTGGCAGCTCCCCAGCTGGCAGGTGGCATTGCTGACCTCGGTGGTCTTCGTAGGCATGATGTCCAGCTCCACGCTCTGGGGGAATATCTCTGACCAGTACGGCAGGAAAACGGGTCTGAAGATCAGTGTGCTCTGGACTCTCTACTACGGCATCCTCAGTGCTTTTGCACCTGTGTATAGCTGGATCCTGGTGCTCCGAGGCCTGGTGGGGTTCGGGATTGGAGGGGTCCCCCAGTCGGTGACACTGTATGCCGAGTTTCTTCCCATGAAAGCCAGAGCCAAATGTATTTTGCTGATTGAGGTCTTCTGGGCCATCGGGACAGTGTTCGAGGTCATCCTGGCCGTGTTCGTGATGCCCAGCCTGGGCTGGCGCTGGCTGCTCATCCTCTCGGCTGTCCCGCTTCTCCTCTTCGCTGTTCTGTGCTTCTGGCTGCCGGAGAGTGCGAGGTACGACGTGCTGTCCGGGAACCAGGAAAAGGCAATCGCCACCTTAAAGAGGATAGCAACAGAAAATGGAGCCCCCATGCCACTTGGGAAGCTCATCATCTCCAGACAGGAAGACCGAGGCAAAATGAGGGACCTTTTCACACCCCACTTCAGATGGACAACGCTGCTGCTGTGGTTTATATGGTTTTCCAATGCGTTTTCTTACTATGGTTTAGTTCTCCTCACCACTGAGCTCTTCCAGGCGGGGGACATCTGCAGCATCTCCAGTCGGAAGAAGGCAGTAGAAGCGAAATGCAGCCTGGCCTGTGAGTACCTGAGTGAGGAGGACTACATGGACCTGCTGTGGACCACTCTCTCTGAGTTTCCAGGTGTTCTTGTGACTCTGTGGATCATTGATCGCCTGGGCCGCAAGAAGACCATGGCCCTATGCTTCATCATCTTCTCCTTCTGCAGCCTCCTGCTGTTCATCTGTGTTGGAAGAAATGTGCTCACTTTGTTACTCTTCATTGCAAGAGCGTTTATTTCTGGAGGCTTCCAAGCTGCCTATGTTTACACGCCTGAGGTCTACCCCACGGCGACGCGGGCACTGGGCCTGGGCACCTGCAGTGGCATGGCGAGAGTGGGTGCTCTCATCACTCCGTTCATTGCTCAGGTGATGTTGGAGTCATCCGTGTACCTGACCCTGGCGGTTTACAGTGGCTGCTGCCTCCTGGCTGCCCTGGCCTCCTGCTTTCTGCCCATCGAGACCAAAGGCCGAGGACTACAGGAGTCCAGCCACAGGGAGTGGGGCCAGGAGATGGTTGGCCGAGGGGCTCACGGAGCCGGTGTCGCCAGGTCGAACTCTGGCTCTCAGGAATAG

Related Sequences

XP_004843688.1 Protein

Svop PREDICTED: synaptic vesicle 2-related protein [Heterocephalus glaber]

Length: 548 aa      View alignments
>XP_004843688.1
MEEDLFQLRQLPVVKFRRTGESARSEDDTASGEHEVQIEGVRVGLEAVELDDGAAVPKEFANPTDDTFMVEDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWQLPSWQVALLTSVVFVGMMSSSTLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLYAEFLPMKARAKCILLIEVFWAIGTVFEVILAVFVMPSLGWRWLLILSAVPLLLFAVLCFWLPESARYDVLSGNQEKAIATLKRIATENGAPMPLGKLIISRQEDRGKMRDLFTPHFRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDICSISSRKKAVEAKCSLACEYLSEEDYMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFIIFSFCSLLLFICVGRNVLTLLLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLTLAVYSGCCLLAALASCFLPIETKGRGLQESSHREWGQEMVGRGAHGAGVARSNSGSQE