Sequence details NCBI ID: XM_004843586.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Vpreb3
Gene Name pre-B lymphocyte 3
Entrez Gene ID 101701225

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

VPREB3 ENSCPOG00000006146 (Guinea pig)

Gene Details

pre-B lymphocyte 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005543, Guinea pig)

Protein Percentage 93.44%
CDS Percentage 93.17%
Ka/Ks Ratio 0.19566 (Ka = 0.0338, Ks = 0.1728)

VPREB3 ENSG00000128218 (Human)

Gene Details

pre-B lymphocyte 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000248948, Human)

Protein Percentage 82.11%
CDS Percentage 83.74%
Ka/Ks Ratio 0.21297 (Ka = 0.1082, Ks = 0.5081)

Vpreb3 ENSMUSG00000000903 (Mouse)

Gene Details

pre-B lymphocyte gene 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000000926, Mouse)

Protein Percentage 67.48%
CDS Percentage 74.25%
Ka/Ks Ratio 0.25748 (Ka = 0.2206, Ks = 0.8568)

Vpreb3 ENSRNOG00000028394 (Rat)

Gene Details

pre-B lymphocyte 3 (Vpreb3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028914, Rat)

Protein Percentage 65.09%
CDS Percentage 71.38%
Ka/Ks Ratio 0.16656 (Ka = 0.2193, Ks = 1.3167)

Genome Location

Sequence Coding sequence

Length: 375 bp    Location: 10424001..10425505   Strand: +
Raw sequence   
>XM_004843586.1
ATGGCCTGTCCCCTGTGCCTGGTCCTCTTGCTGGTGGAAGCCTTCCTGGCAGTCTCCCAGCCAGCCCTGGCCCAGCCGGATGCACTGCTGGTCTTCCCAGGCCAAGTGGCTCAACTCTCCTGCACACTCATCCCCCAGCATGCCAGCATTGCAGACTATGGTGTGTCCTGGTACCAGCAGCGGGCAGGTAGTGCCCCCCGATACCTCCTCTACTACCATTCTGAGGAGGACTACCACCGGCCTGATGACATTCCTGACCGATTCTCAGCTGCCAAGGATGTAGCCCACAATGCTTGTATCCTAACCATCAGCCCAGTGCAGCCTGAGGATGATGCAGATTATTACTGCTCTGTTGGCTATAGCTCTGATCCCTAG

Related Sequences

XP_004843643.1 Protein

Vpreb3 PREDICTED: pre-B lymphocyte protein 3 [Heterocephalus glaber]

Length: 124 aa      View alignments
>XP_004843643.1
MACPLCLVLLLVEAFLAVSQPALAQPDALLVFPGQVAQLSCTLIPQHASIADYGVSWYQQRAGSAPRYLLYYHSEEDYHRPDDIPDRFSAAKDVAHNACILTISPVQPEDDADYYCSVGYSSDP