Details from NCBI annotation

Gene Symbol Rtdr1
Gene Name rhabdoid tumor deletion region gene 1
Entrez Gene ID 101714821

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RTDR1 ENSCPOG00000011500 (Guinea pig)

Gene Details

rhabdoid tumor deletion region gene 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010341, Guinea pig)

Protein Percentage 86.47%
CDS Percentage 89.41%
Ka/Ks Ratio 0.40436 (Ka = 0.0857, Ks = 0.212)

RTDR1 ENSG00000100218 (Human)

Gene Details

rhabdoid tumor deletion region gene 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000216036, Human)

Protein Percentage 69.12%
CDS Percentage 78.63%
Ka/Ks Ratio 0.36714 (Ka = 0.207, Ks = 0.5638)

Rtdr1 ENSMUSG00000009070 (Mouse)

Gene Details

rhabdoid tumor deletion region gene 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000131632, Mouse)

Protein Percentage 74.71%
CDS Percentage 77.16%
Ka/Ks Ratio 0.18787 (Ka = 0.1687, Ks = 0.8981)

Genome Location

Sequence Coding sequence

Length: 1023 bp    Location: 9502354..9416415   Strand: -
>XM_004843529.1
ATGGCTCATGCTCGTATCTCCATGCACCTGCCTCCAAACATCAATCCCACCCAGGCTGACATTGCCTATGGCTGTTGGGCCCTGCCCAATCTGAACAAGGAGCTACAGTCGGAGGACCTGCAGACAAGGCAGAAAGCCCTCATGGCCCTGTGTGACCTCATGCACGACCCTGAGTATGTCTACGAGGCTATCAACATAGGCTGCCTGGAGAGTCTGACAGCTTTGCTGAAGGATAGTGACAGCCTGGTTCGGATAAAGACCACCGAGGTGCTCCACATCATGGCGACCCATAACGTGGGCAGAACCAGCTTTTTAGAGCACGACATCATCCTTGCCCTGTCCTTTCTGCTGAATGATCCCCACTCAGCCTGCCGGGAGAACCTGCACCGGGTATACAAGCAACTGGCCCAGCTGCCTTCAGGGGCCTGGGGCATCATCAACAGTGGCCTGATCCCTTCGCTGGTGTGGAAGCTGCAGAGAGAGGAGGAGGGCATCCAGGAACTCATCTTGGACACACTAGCCCCCTGCCTGCAGGAAGATGCCACTGAAGCACTGGGCAGCCGTGCTGTGCCCTTCCTCAAGCAGAAGCTCCTTAGCAGCAACAAAAACATCCGCAGCAGGGCTGCTCAGGTGCTCATCGCCATTAGCATCCCTTTGGAGGGCAAGAACCAGGTAAGGCAGTATGATGTCATCCCCATCCTGGTTGATCTTCTGAAAGATGAAGAGCAGGAGGTTCAGGCTAATGCTGCTGGAGCCCTGATGTATGCCACAGTGACCACTGAAGGGAAATATGCGGCCCTGGATGCAGATGCCATAGACCCTCTCCTGCAGCTGCTGTCTTCACCCTTGACCAGGGTATGCCTGAATGCCACCAAGGCCCTCACCATGCTGGCTGAGGCCCCTGAGGGCCGCAAGCGCCTGCAGCCCCAAGTGCCTGCCTTCCGGATTCTAGAGTCAGATGGCAACCAGACCATACAGCGGGCAGCCTGGATCGCCATCAAAGTGATTGAGTGGAAACCCTGA

Related Sequences

XP_004843586.1 Protein

Rtdr1 PREDICTED: rhabdoid tumor deletion region protein 1 [Heterocephalus glaber]

Length: 340 aa      View alignments
>XP_004843586.1
MAHARISMHLPPNINPTQADIAYGCWALPNLNKELQSEDLQTRQKALMALCDLMHDPEYVYEAINIGCLESLTALLKDSDSLVRIKTTEVLHIMATHNVGRTSFLEHDIILALSFLLNDPHSACRENLHRVYKQLAQLPSGAWGIINSGLIPSLVWKLQREEEGIQELILDTLAPCLQEDATEALGSRAVPFLKQKLLSSNKNIRSRAAQVLIAISIPLEGKNQVRQYDVIPILVDLLKDEEQEVQANAAGALMYATVTTEGKYAALDADAIDPLLQLLSSPLTRVCLNATKALTMLAEAPEGRKRLQPQVPAFRILESDGNQTIQRAAWIAIKVIEWKP