Details from NCBI annotation

Gene Symbol Patz1
Gene Name POZ (BTB) and AT hook containing zinc finger 1, transcript variant X1
Entrez Gene ID 101699786

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PATZ1 ENSCPOG00000010787 (Guinea pig)

Gene Details

POZ (BTB) and AT hook containing zinc finger 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009685, Guinea pig)

Protein Percentage 98.54%
CDS Percentage 96.22%
Ka/Ks Ratio 0.04428 (Ka = 0.0065, Ks = 0.1477)

PATZ1 ENSG00000100105 (Human)

Gene Details

POZ (BTB) and AT hook containing zinc finger 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000266269, Human)

Protein Percentage 98.4%
CDS Percentage 93.16%
Ka/Ks Ratio 0.02282 (Ka = 0.0072, Ks = 0.3164)

Patz1 ENSMUSG00000020453 (Mouse)

Gene Details

POZ (BTB) and AT hook containing zinc finger 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000050684, Mouse)

Protein Percentage 97.82%
CDS Percentage 89.96%
Ka/Ks Ratio 0.0191 (Ka = 0.0099, Ks = 0.5201)

PATZ1 ENSRNOG00000018709 (Rat)

Gene Details

POZ (BTB) and AT hook containing zinc finger 1 (Patz1), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025378, Rat)

Protein Percentage 97.97%
CDS Percentage 90.17%
Ka/Ks Ratio 0.01797 (Ka = 0.0092, Ks = 0.5115)

Genome Location

Sequence Coding sequence

Length: 2064 bp    Location: 7842015..7823009   Strand: -
>XM_004843482.1
ATGGAGCGGGTAAACGACGCTTCCTGCGGCCCGTCGGGCTGCTACACCTACCAGGTGAGCAGACACAGTACGGAGATGCTGCACAATCTGAACCAGCAGCGCAAAAACGGCGGGCGCTTCTGTGACGTGCTCCTGCGGGTGGGCGATGAGAGCTTCCCAGCTCACCGCGCAGTGCTGGCCGCCTGCAGCGAGTACTTTGAGTCTGTGTTCAGCGCCCAGTTGGGCGATGGCGGAGCTGCCGACGGGGGTCCCTCTGATGTGGGGGGCGCGTCAGCAGCCCCGGGCGGCGGGGCCGGGGGCAGCCGAGAGCTTGAGATGCACACCATCAGCTCCAAGGTGTTTGGAGACATTCTGGACTTCGCCTACACTTCCCGCATCGTGGTCCGCCTGGAGAGCTTCCCTGAGCTCATGACTGCCGCCAAGTTCCTGCTAATGAGATCGGTCATCGAGATCTGCCAGGAAGTCATCAAGCAGTCTAACGTGCAGATCTTGGTGCCGCCTGCCCGGGCAGACATCATGCTCTTTCGGCCCCCTGGGACTTCTGACTTGGGTTTCCCTTTGGACATGACCAACGGGGCAGCCTTGGCTGCCAACAGCAATGGCATCGCAGGCAGCATGCAGCCTGAAGAGGAAGCTGCCCGAGCGGCTGGTGCAGCCATTTCGAGCCAAGCCTCCTTGCCTGTGTTACCCGGGGTGGACCGTTTGCCCATGGTGGCTGGACCCTTGTCCCCTCAACTGCTGACTTCCCCATTCCCTAATGTGGCATCCAGCACTCCTCCACTAACTGGCAAACGAGGCCGGGGTCGCCCAAGAAAGGCCAACCTGCTGGACTCAATGTTAGGGTCCCCTGGGGGCCTGAGGGAAGCGGGCATCCTTCCCTGTGGCCTGTGTGGGAAGGTGTTTACTGATGCCAACCGGCTCCGGCAGCATGAGGCCCAGCATGGTGTCACCAGCCTCCAGCTGGGCTACATCGATCTTCCTCCTCCAAGGCTGGGTGAGAATGGGCTACCCATCTCTGAGGACCCCGATGGCCCCCGAAAGAGGAGCCGGACCAGGAAGCAGGTGGCTTGTGAGATCTGCGGCAAGATCTTCCGAGACGTGTACCATCTCAACCGGCACAAGCTGTCCCACTCTGGGGAGAAGCCCTATTCCTGCCCCGTGTGTGGACTGCGGTTCAAGAGAAAAGACCGAATGTCCTACCATGTGCGGTCCCATGATGGGTCTGTGGGCAAGCCCTACATCTGCCAGAGCTGTGGGAAAGGCTTCTCCAGGCCTGATCACTTGAATGGACATATCAAGCAGGTGCACACTTCTGAGCGGCCTCACAAGTGTCAGACCTGCAATGCTTCTTTTGCTACACGAGACCGTCTGCGATCCCATCTAGCCTGTCATGAAGACAAGGTGCCCTGCCAGGTGTGTGGGAAGTATTTGCGGGCAGCATACATGGCAGACCACCTGAAGAAGCACAGCGAGGGGCCCAGCAACTTCTGCAGTATTTGTAATCGAGGTTTCTCCTCTGCCTCCTACTTAAAGGTCCATGTTAAAACCCACCACGGTGTTCCCCTTCCCCAGGTCTCCAGGCACCAGGAGCCCATTCCGAATGGGGGAGCAGCGTTCCACTGCGCCAGGACCTATGGCAACAAAGAAGGCCAGAAATGCTCACATCAGGATCCGATTGAGAGCTCCGACTCCTATGGTGACCTCTCAGATGCCAGTGACCTGAAGACACCAGAGAAGCAGAGCACCAATGGCTCTTTCTCCTGTGACATGGCAGTCCCTAAAAACAAAATGGAGTCTGATGGGGAGAAGAAGTACCCATGCCCTGAATGTGGAAGCTTTTTCCGCTCTAAGTCCTACTTGAACAAACACATCCAGAAGGTGCATGTCCGGTCCCTTGGAGGTTCCCTAGGAGACCTGGGCCCTGCTCTTGGCTCACCTTTCTCCCCTCAGCAGAACATGTCACTCCTTGAGTCATTTGGGTTTCAGATTGTTCAGTCGGCGTTTGCATCATCTTTAGTAGATCCTGAGGTGGACCAGCAGCCCATGGGGCCTGAGGGGAAATGA

Related Sequences

XP_004843539.1 Protein

Patz1 PREDICTED: POZ-, AT hook-, and zinc finger-containing protein 1 isoform X1 [Heterocephalus glaber]

Length: 687 aa      View alignments
>XP_004843539.1
MERVNDASCGPSGCYTYQVSRHSTEMLHNLNQQRKNGGRFCDVLLRVGDESFPAHRAVLAACSEYFESVFSAQLGDGGAADGGPSDVGGASAAPGGGAGGSRELEMHTISSKVFGDILDFAYTSRIVVRLESFPELMTAAKFLLMRSVIEICQEVIKQSNVQILVPPARADIMLFRPPGTSDLGFPLDMTNGAALAANSNGIAGSMQPEEEAARAAGAAISSQASLPVLPGVDRLPMVAGPLSPQLLTSPFPNVASSTPPLTGKRGRGRPRKANLLDSMLGSPGGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYIDLPPPRLGENGLPISEDPDGPRKRSRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQTCNASFATRDRLRSHLACHEDKVPCQVCGKYLRAAYMADHLKKHSEGPSNFCSICNRGFSSASYLKVHVKTHHGVPLPQVSRHQEPIPNGGAAFHCARTYGNKEGQKCSHQDPIESSDSYGDLSDASDLKTPEKQSTNGSFSCDMAVPKNKMESDGEKKYPCPECGSFFRSKSYLNKHIQKVHVRSLGGSLGDLGPALGSPFSPQQNMSLLESFGFQIVQSAFASSLVDPEVDQQPMGPEGK