Details from NCBI annotation

Gene Symbol Nipsnap1
Gene Name nipsnap homolog 1 (C. elegans), transcript variant X1
Entrez Gene ID 101705119

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NIPSNAP1 ENSCPOG00000027132 (Guinea pig)

Gene Details

nipsnap homolog 1 (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019009, Guinea pig)

Protein Percentage 95.1%
CDS Percentage 93.59%
Ka/Ks Ratio 0.09056 (Ka = 0.022, Ks = 0.2427)

NIPSNAP1 ENSG00000184117 (Human)

Gene Details

nipsnap homolog 1 (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSP00000216121, Human)

Protein Percentage 94.72%
CDS Percentage 90.61%
Ka/Ks Ratio 0.05882 (Ka = 0.0269, Ks = 0.4573)

Nipsnap1 ENSMUSG00000034285 (Mouse)

Gene Details

4-nitrophenylphosphatase domain and non-neuronal SNAP25-like protein homolog 1 (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000049338, Mouse)

Protein Percentage 94.37%
CDS Percentage 88.26%
Ka/Ks Ratio 0.05444 (Ka = 0.0328, Ks = 0.602)

Nipsnap1 ENSRNOG00000008374 (Rat)

Gene Details

nipsnap homolog 1 (C. elegans) (Nipsnap1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000011158, Rat)

Protein Percentage 93.66%
CDS Percentage 88.38%
Ka/Ks Ratio 0.06189 (Ka = 0.036, Ks = 0.5811)

Genome Location

Sequence Coding sequence

Length: 861 bp    Location: 5893652..5875123   Strand: -
>XM_004843407.1
ATGGCTCCGCGGCTTTGCAGCATCTCTGTGGCGACACGGCGGCTACTGGGTAGCCCAGGACCCAGAGCGGGGGTCGCTGCCGCGCCGGCTGCGGCTGCTGCCCGTTCCTATTCCAAGGACAGTGAAGGCAGCTGGTTTCGCTCCCTGTTTGTCCACAAAGTAGACCCCCGGAAGGATGCCCACTCTACCCTGCTGTCCAAGAAGGAGACCAGCAGCCTCTATAAGATCCAGTTTCACAATGTGAAGCCCGAGTGTCTGGATGCCTACAACAGTCTGACGGAGGCTGTGCTGCCAAAGCTCCACCTGGATGAGGATTATCCCTGCTCGCTTGTGGGCAACTGGAACACGTGGTACGGGGAGCAGGACCAGGCAGTGCATCTGTGGCGCTTCTCAGGCGGCTACCCAGCCCTCATGGACTGCATGAACAAGCTCAAAAACAACAAGGAGTACCTGGAATTCCGAAAGGAACGGAGCTGTATGCTGCTGTCCAGGAGAAACCAGTTGCTCCTGGAATTCAGCTTCTGGAATGAGCCACAGCCTAGAGCAGGCCCCAACATCTATGAGCTGAGGACATACAAACTCAAGCCAGGAACCATGATCGAGTGGGGCAACAACTGGGCTCGGGCCATCAAGTACCGGCAGGAGAACCGGGAAGCTGTGGGCGGCTTCTTCTCACAGATAGGAGAGCTCTACGTTGTACATCATCTCTGGGCCTACAGAGACCTGCAGTCTCGGGAGGAGACTCGAAATGCTGCCTGGAGGAAGAGGGGCTGGGATGAAAATGTCTACTATACAGTCCCCTTGGTGCGACACATGGAGTCTCGGATCATGATCCCCTTGAAGATTTCGCCTCTTCAGTGA

Related Sequences

XP_004843464.1 Protein

Nipsnap1 PREDICTED: protein NipSnap homolog 1 isoform X1 [Heterocephalus glaber]

Length: 286 aa      View alignments
>XP_004843464.1
MAPRLCSISVATRRLLGSPGPRAGVAAAPAAAAARSYSKDSEGSWFRSLFVHKVDPRKDAHSTLLSKKETSSLYKIQFHNVKPECLDAYNSLTEAVLPKLHLDEDYPCSLVGNWNTWYGEQDQAVHLWRFSGGYPALMDCMNKLKNNKEYLEFRKERSCMLLSRRNQLLLEFSFWNEPQPRAGPNIYELRTYKLKPGTMIEWGNNWARAIKYRQENREAVGGFFSQIGELYVVHHLWAYRDLQSREETRNAAWRKRGWDENVYYTVPLVRHMESRIMIPLKISPLQ