Sequence details NCBI ID: XM_004843366.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ccdc117
Gene Name coiled-coil domain containing 117
Entrez Gene ID 101722744

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC117 ENSCPOG00000007791 (Guinea pig)

Gene Details

coiled-coil domain containing 117

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007015, Guinea pig)

Protein Percentage 90.58%
CDS Percentage 91.91%
Ka/Ks Ratio 0.23108 (Ka = 0.0471, Ks = 0.204)

CCDC117 ENSG00000159873 (Human)

Gene Details

coiled-coil domain containing 117

External Links

Gene Match (Ensembl Protein ID: ENSP00000249064, Human)

Protein Percentage 86.23%
CDS Percentage 88.16%
Ka/Ks Ratio 0.21483 (Ka = 0.0709, Ks = 0.3298)

Ccdc117 ENSMUSG00000020482 (Mouse)

Gene Details

coiled-coil domain containing 117

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020776, Mouse)

Protein Percentage 76.81%
CDS Percentage 81.28%
Ka/Ks Ratio 0.28997 (Ka = 0.1414, Ks = 0.4875)

Ccdc117 ENSRNOG00000010706 (Rat)

Gene Details

coiled-coil domain containing 117 (Ccdc117), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015627, Rat)

Protein Percentage 79.35%
CDS Percentage 83.45%
Ka/Ks Ratio 0.27272 (Ka = 0.1184, Ks = 0.434)

Genome Location

Sequence Coding sequence

Length: 831 bp    Location: 5103591..5117728   Strand: +
Raw sequence   
>XM_004843366.1
ATGGCCGCACTCGGCCGGCCTTTTAGCGGCCTCCCCTTGAGCGGCAGCTCGGACTTTCTACAGCCACCTCCGGCCTTCCCGGGCCGGGCCTTTCCTCCGGGAGCCCACGGCCCGGAGCTTGCCCCGCGGCCGGGACCCCGCGCCGCCCCGAGCAGCCCGGGCGGGAGTACGGCGCTCGGACGTGTTTCCGTTCACTCTAAAAAGCACAAGCGAGAAGAGGATGATGATGATTGTCCAGTAAGAAAGAAAAGGCTGACTGAAGCAGAGGTCTGTACTGGCCCAAATGACTGGATTCTTTGTACACATCGGGATGTAGAGAGTCGAAGAGTAAATCCATGCACTAGTGGGCTTTCTGTACCTGGCATGTTAGATGCTATTTGTGAAGAGATGGATCAGACAACTGGAGAACCACAGTGTGAAGTTGCCCGAAGGAGGCTACAGGAGATTGAGGACAGGATAATTGATGAAGATGAAGAAGTTGAAGCTGAAAGAAATATTAACCATCTCCCCAGCCTTGTCCTCTCAGATACCATGAAAACAGGTTTGAAGCAAGAATTTGATGAAGTCTTTACAAAGAAGATGATTGAGTCTATGAGCCGTCCATCCATGGAACTTGTGCTCTGGAAACCTCTCCCTGAACTCCTTTCTGATAAGCCAAAGCCATCATCTAATGCTAAAAACTTCATGGGAGAGAGCCAAACGAAGCATGCAGCTGCTGCCACTGCCTTCCCACAGAGAACTGAACTGTTCTTGGAACCTCCGCAAACAGGGGTGCCTCTTTACAATAGTTTGGAGACAGCTGCTAGCACAGAAGAAGAGATGGAACTCTAG

Related Sequences

XP_004843423.1 Protein

Ccdc117 PREDICTED: coiled-coil domain-containing protein 117 [Heterocephalus glaber]

Length: 276 aa      View alignments
>XP_004843423.1
MAALGRPFSGLPLSGSSDFLQPPPAFPGRAFPPGAHGPELAPRPGPRAAPSSPGGSTALGRVSVHSKKHKREEDDDDCPVRKKRLTEAEVCTGPNDWILCTHRDVESRRVNPCTSGLSVPGMLDAICEEMDQTTGEPQCEVARRRLQEIEDRIIDEDEEVEAERNINHLPSLVLSDTMKTGLKQEFDEVFTKKMIESMSRPSMELVLWKPLPELLSDKPKPSSNAKNFMGESQTKHAAAATAFPQRTELFLEPPQTGVPLYNSLETAASTEEEMEL