Sequence details NCBI ID: XM_004843350.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tfip11
Gene Name tuftelin interacting protein 11, transcript variant X2
Entrez Gene ID 101715772

Database interlinks

Part of NW_004624747.1 (Scaffold)

For more information consult the page for NW_004624747.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TFIP11 ENSCPOG00000000358 (Guinea pig)

Gene Details

tuftelin interacting protein 11

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000314, Guinea pig)

Protein Percentage 99.16%
CDS Percentage 93.67%
Ka/Ks Ratio 0.01078 (Ka = 0.0037, Ks = 0.3429)

TFIP11 ENSG00000100109 (Human)

Gene Details

tuftelin interacting protein 11

External Links

Gene Match (Ensembl Protein ID: ENSP00000384421, Human)

Protein Percentage 97.01%
CDS Percentage 90.28%
Ka/Ks Ratio 0.02215 (Ka = 0.0136, Ks = 0.6118)

Tfip11 ENSMUSG00000029345 (Mouse)

Gene Details

tuftelin interacting protein 11

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031288, Mouse)

Protein Percentage 92.47%
CDS Percentage 86.82%
Ka/Ks Ratio 0.03381 (Ka = 0.0355, Ks = 1.0493)

Tfip11 ENSRNOG00000000663 (Rat)

Gene Details

tuftelin interacting protein 11 (Tfip11), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000000828, Rat)

Protein Percentage 92.59%
CDS Percentage 87.14%
Ka/Ks Ratio 0.03519 (Ka = 0.0345, Ks = 0.9804)

Genome Location

Sequence Coding sequence

Length: 2514 bp    Location: 3055726..3041758   Strand: -
Raw sequence   
>XM_004843350.1
ATGTCATTGTCCCACTTGTACCGGGACGGGGAAGGCCACATGGATGATGACGATGATGAGCGGGAGAACTTTGAGATCACTGACTGGGATCTCCAGAATGAATTCAACCCCAACCGGCAGCGCCATTGGCAGACCAAAGAAGAAGCCACTTATGGGGTGTGGGCAGAGCGTGACTCAGATGAGGAGAGGCCCAGCTTTGGAGGCAAACGGGCCCGGGACTACTCTGCTCCTGTCAACTTCATTAGTGCGGGGCTCAAGAAAGGGGCAGCTGAGGAGGCAGAATTGGAAGACTCTGATGATGAAGAGAAGCCTGTTACACAGGATGACTTCCCCAAGGATTTTGGACCAAAGAAGTTAAAAACGGGTGGCAATTTTAAGCCCAGCCAGAAAGGTTTTGCAGGAGGAACCAAGTCTTTCATGGACTTTGGCAGCTGGGAAAGACATACAAAAGGCATTGGACAGAAGCTTCTTCAGAAGATGGGTTATGTGCCCGGCCGGGGTCTTGGGAAGAATGCACAAGGTATCATTAACCCCATTGAAGCCAAACAGAGAAAGGGAAAAGGAGCTGTGGGGGCCTATGGCTCCGAGCGGACCACTCAGTCCCTGCAGGACTTCCCCGTGGTGGACTCAGAAGAGGAGGCTGAAGAGGAGTTTCAGAAGGAGCTGAGCCAGTGGAGGAAAGACCCTAGTGGAAGCAAGAAGAAGCCAAAGTACTCTTACAAGACGGTGGAAGAGTTGAAGGCCAAGGGCAGAATTAGCAAGAAGCTCACTGCTCCCCAGAAGGAGCTTGCTCAGGTCAAGGTCATAGACATGACGGGCCGGGAGCAGAAGGTCTACTACAGCTATAGCCAGATCAGCCACAAGCACAACGTGCCAGACGACGGGCTGCCTCTGCAGTCTCAGTTGCCTCCCCTGCCCGGCAAAGAAGCAAAGGCCCCAGGCTTTGCACTGCCTGAGCTGGAGCACAACCTGCAGCTGCTCATTGACCTCACTGAGCAGGAGATCATCCAGAATGACCGGCAGCTGCAGTATGAGCGGGACATGGTGGTCAACCTCTCTCACGAGCTAGAGAAGATGTCTGAGGTCCTGGACCATGAGGAGCGGGTCATCTCCAACCTTAGCAAGGTGCTGGAGATGGTGGAGGAATGCGAGCGGCGCATGCAGCCCAGCTGCAGTGACCCACTCACGCTGGATGAGTGTGCCCGCGTCTTTGAAACCCTGCAGGATAAGTACTACGAGGAGTATCGGATGTCGGACCGCATGGACCTTGCGGTGGCCATTGTGTACCCACTCATGAAGGACTACTTCAAGGAGTGGGACCCCCTCAAAGACTGTGCCTATGGCACCGAGATCGTCTCCAAGTGGAAGAGCCTACTGGAGAACGACCAGCTCCTGTCACACGGCGGCCAGGACCTCTCTGCAGATGCCTTTCACAGGCTGATATGGGAAGTCTGGATGCCTTTTGTTCGAAATATTGTTACCCAGTGGCAGCCAAGAAACTGTGACCCAATGGTAGACTTTCTGGACAGCTGGGTGCACATTATTCCTGTGTGGATCTTAGATAACATCCTCGACCAGCTCATCTTCCCCAAGCTGCAAAAGGAGGTGGACAGCTGGAACCCCCTGACAGACACTGTCCCCATCCACTCCTGGATCCATCCATGGTTGCCCCTCATGCGGGCACGCCTAGAGCCGCTCTACTCCCCGATCCGCAGCAAGTTGTCCAGCGCCCTGCAAAAGTGGCATCCTAGCGACTCCTCAGCCAAGCTCATCCTCCAGCCCTGGAAAGATGTCTTCACCCCTGGCTCCTGGGAGGCCTTCATGGTCAAGAACATCGTGCCCAAGCTAGGGATGTGTCTTGGGGAGTTAGTTATTAACCCCCACCAGCAGCACATGGACGCTTTTTACTGGGTGATCGACTGGGAAGGGATGATTTCTGTCTCCAGCCTTGTGGGGCTCCTTGAGAAGCACTTCTTCCCCAAGTGGCTCCAGGTGCTGTGCTCCTGGCTCAGTAACAGCCCGAATTATGAAGAGATCACCAAGTGGTACCTGGGGTGGAAATCCATGTTCTCAGACCAGGTGCTGGCACATCCATCCATCAAAGACAAATTTAATGAAGCCCTTGATATCATGAACAGGGCAGTGTCCTCTAATGTTGGTGCCTACATGCAGCCAGGGGCTCGGGAGAACATTGCCTACCTCACCCACACGGAGCGGAGGAAGGACTTCCAGTATGAGGCCATGCAGGAGCGACGAGAGGCCGAGAACATGGCCCAGAGGGGCATTGGCGCAGCTGCCAGCTCTGTGCCCATGAACTTCAAAGACCTCATCGAGACCAAGGCTGAGGAGCATAACATTGTCTTCATGCCCGTCATTGGCAAGCGGCATGAGGGGAAGCAGTTGTACACATTTGGCCGCATTGTGATCTACATCGACCGAGGGGTAGTATTTGTGCAGGGCGAGAAGACCTGGGTGCCCACCTCCCTGCAGAGCCTGATTGACATGGCCAAATAG

Related Sequences

XP_004843407.1 Protein

Tfip11 PREDICTED: tuftelin-interacting protein 11 isoform X2 [Heterocephalus glaber]

Length: 837 aa      View alignments
>XP_004843407.1
MSLSHLYRDGEGHMDDDDDERENFEITDWDLQNEFNPNRQRHWQTKEEATYGVWAERDSDEERPSFGGKRARDYSAPVNFISAGLKKGAAEEAELEDSDDEEKPVTQDDFPKDFGPKKLKTGGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAYGSERTTQSLQDFPVVDSEEEAEEEFQKELSQWRKDPSGSKKKPKYSYKTVEELKAKGRISKKLTAPQKELAQVKVIDMTGREQKVYYSYSQISHKHNVPDDGLPLQSQLPPLPGKEAKAPGFALPELEHNLQLLIDLTEQEIIQNDRQLQYERDMVVNLSHELEKMSEVLDHEERVISNLSKVLEMVEECERRMQPSCSDPLTLDECARVFETLQDKYYEEYRMSDRMDLAVAIVYPLMKDYFKEWDPLKDCAYGTEIVSKWKSLLENDQLLSHGGQDLSADAFHRLIWEVWMPFVRNIVTQWQPRNCDPMVDFLDSWVHIIPVWILDNILDQLIFPKLQKEVDSWNPLTDTVPIHSWIHPWLPLMRARLEPLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVKNIVPKLGMCLGELVINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERRKDFQYEAMQERREAENMAQRGIGAAASSVPMNFKDLIETKAEEHNIVFMPVIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK